RNA–Protein interactions for RNA: ENST00000225474.6

CSF3-201, Transcript of colony stimulating factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSF3, Length 1,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3-201ENST00000225474 NISCHQ9Y2I1 1504 aa34.09■■■■□ 3.05
CSF3-201ENST00000225474 ABCC9O60706 1549 aa30.61■■■□□ 2.49
CSF3-201ENST00000225474 CCDC180Q9P1Z9 1646 aa30.59■■■□□ 2.49
CSF3-201ENST00000225474 RB1CC1Q8TDY2 1594 aa29.17■■■□□ 2.26
CSF3-201ENST00000225474 NACADO15069 1562 aa28.98■■■□□ 2.23
CSF3-201ENST00000225474 DCAF8L2P0C7V8 631 aa28.86■■■□□ 2.21
CSF3-201ENST00000225474 DNAJC5BQ9UF47 199 aa28.84■■■□□ 2.21
CSF3-201ENST00000225474 MYO15BQ96JP2 1530 aa28.63■■■□□ 2.17
CSF3-201ENST00000225474 PABPN1Q86U42 306 aaKnown RBP eCLIP28.47■■■□□ 2.15
CSF3-201ENST00000225474 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
CSF3-201ENST00000225474 ZCCHC6Q5VYS8 1495 aaKnown RBP28.3■■■□□ 2.12
CSF3-201ENST00000225474 BICRAQ9NZM4 1560 aa28.29■■■□□ 2.12
CSF3-201ENST00000225474 DCAF1Q9Y4B6 1507 aa28.18■■■□□ 2.1
CSF3-201ENST00000225474 SHROOM4Q9ULL8 1493 aa28.06■■■□□ 2.08
CSF3-201ENST00000225474 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
CSF3-201ENST00000225474 CC2D2AQ9P2K1 1620 aa27.68■■■□□ 2.02
CSF3-201ENST00000225474 CECR2Q9BXF3 1484 aa27.64■■■□□ 2.02
CSF3-201ENST00000225474 EIF4G1Q04637 1599 aaKnown RBP27.61■■■□□ 2.01
CSF3-201ENST00000225474 NCAPD3P42695 1498 aa26.78■■□□□ 1.88
CSF3-201ENST00000225474 DNAJC5Q9H3Z4 198 aa26.66■■□□□ 1.86
CSF3-201ENST00000225474 ATAD2BQ9ULI0 1458 aa26.62■■□□□ 1.85
CSF3-201ENST00000225474 SMARCA2P51531 1590 aa26.57■■□□□ 1.84
CSF3-201ENST00000225474 CUX2O14529 1486 aa26.56■■□□□ 1.84
CSF3-201ENST00000225474 HMGXB3Q12766 1538 aa26.54■■□□□ 1.84
CSF3-201ENST00000225474 SMARCA4P51532 1647 aa26.53■■□□□ 1.84
CSF3-201ENST00000225474 ERCC6Q03468 1493 aa26.48■■□□□ 1.83
CSF3-201ENST00000225474 BAZ1AQ9NRL2 1556 aaPredicted RBP26.43■■□□□ 1.82
CSF3-201ENST00000225474 PEG3Q9GZU2 1588 aa26.36■■□□□ 1.81
CSF3-201ENST00000225474 BAZ1BQ9UIG0 1483 aaKnown RBP26.34■■□□□ 1.81
CSF3-201ENST00000225474 MROH2BQ7Z745 1585 aa26.31■■□□□ 1.8
CSF3-201ENST00000225474 NESP48681 1621 aa26.25■■□□□ 1.79
CSF3-201ENST00000225474 LAMC3Q9Y6N6 1575 aa26.15■■□□□ 1.78
CSF3-201ENST00000225474 THOC2Q8NI27 1593 aaKnown RBP26.06■■□□□ 1.76
CSF3-201ENST00000225474 WIZO95785 1651 aa26.04■■□□□ 1.76
CSF3-201ENST00000225474 PDS5BQ9NTI5 1447 aa26.03■■□□□ 1.76
CSF3-201ENST00000225474 CADPSQ9ULU8 1353 aa25.93■■□□□ 1.74
CSF3-201ENST00000225474 RSF1Q96T23 1441 aaPredicted RBP25.91■■□□□ 1.74
CSF3-201ENST00000225474 KIF21AQ7Z4S6 1674 aa25.89■■□□□ 1.73
CSF3-201ENST00000225474 MRC2Q9UBG0 1479 aa25.77■■□□□ 1.72
CSF3-201ENST00000225474 WDR62O43379 1518 aa25.72■■□□□ 1.71
CSF3-201ENST00000225474 TOP2AP11388 1531 aaKnown RBP25.66■■□□□ 1.7
CSF3-201ENST00000225474 CEP164Q9UPV0 1460 aa25.63■■□□□ 1.69
CSF3-201ENST00000225474 CFTRP13569 1480 aa25.61■■□□□ 1.69
CSF3-201ENST00000225474 FANCD2Q9BXW9 1451 aa25.59■■□□□ 1.69
CSF3-201ENST00000225474 CCDC88BA6NC98 1476 aa25.43■■□□□ 1.66
CSF3-201ENST00000225474 URB2Q14146 1524 aaKnown RBP25.37■■□□□ 1.65
CSF3-201ENST00000225474 OSCARQ8IYS5 282 aa25.3■■□□□ 1.64
CSF3-201ENST00000225474 TRIM41Q8WV44 630 aa25.3■■□□□ 1.64
CSF3-201ENST00000225474 PRDM2Q13029 1718 aa25.26■■□□□ 1.63
CSF3-201ENST00000225474 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
CSF3-201ENST00000225474 IFT140Q96RY7 1462 aa25.16■■□□□ 1.62
CSF3-201ENST00000225474 ABCC8Q09428 1581 aa25.12■■□□□ 1.61
CSF3-201ENST00000225474 TOPBP1Q92547 1522 aa25.09■■□□□ 1.61
CSF3-201ENST00000225474 ZNF608Q9ULD9 1512 aaPredicted RBP25.05■■□□□ 1.6
CSF3-201ENST00000225474 DNMBPQ6XZF7 1577 aa25■■□□□ 1.59
CSF3-201ENST00000225474 EIF4G3O43432 1585 aaKnown RBP24.91■■□□□ 1.58
CSF3-201ENST00000225474 RIMBP3CA6NJZ7 1639 aa24.89■■□□□ 1.58
CSF3-201ENST00000225474 RIMBP3BA6NNM3 1639 aa24.89■■□□□ 1.58
CSF3-201ENST00000225474 RIMBP3Q9UFD9 1639 aa24.89■■□□□ 1.58
CSF3-201ENST00000225474 TARBP1Q13395 1621 aaKnown RBP24.88■■□□□ 1.57
CSF3-201ENST00000225474 ARHGEF11O15085 1522 aa24.85■■□□□ 1.57
CSF3-201ENST00000225474 POLA1P09884 1462 aaPredicted RBP24.83■■□□□ 1.57
CSF3-201ENST00000225474 AQRO60306 1485 aaKnown RBP eCLIP24.82■■□□□ 1.56
CSF3-201ENST00000225474 SOGA1O94964 1423 aa24.72■■□□□ 1.55
CSF3-201ENST00000225474 WDR97A6NE52 1622 aa24.71■■□□□ 1.55
CSF3-201ENST00000225474 CHD1O14646 1710 aa24.7■■□□□ 1.54
CSF3-201ENST00000225474 RAD54L2Q9Y4B4 1467 aa24.69■■□□□ 1.54
CSF3-201ENST00000225474 CUX1P39880 1505 aa24.69■■□□□ 1.54
CSF3-201ENST00000225474 FBLN2P98095 1184 aa24.66■■□□□ 1.54
CSF3-201ENST00000225474 TDRD9Q8NDG6 1382 aaKnown RBP24.65■■□□□ 1.54
CSF3-201ENST00000225474 FGD5Q6ZNL6 1462 aa24.65■■□□□ 1.54
CSF3-201ENST00000225474 CYB5RLQ6IPT4 315 aa24.65■■□□□ 1.54
CSF3-201ENST00000225474 ARAP1Q96P48 1450 aa24.59■■□□□ 1.53
CSF3-201ENST00000225474 MAGI1Q96QZ7 1491 aaPredicted RBP24.58■■□□□ 1.53
CSF3-201ENST00000225474 SNAPC4Q5SXM2 1469 aa24.56■■□□□ 1.52
CSF3-201ENST00000225474 GRIN2BQ13224 1484 aa24.54■■□□□ 1.52
CSF3-201ENST00000225474 CHMP7Q8WUX9 453 aaPredicted RBP24.52■■□□□ 1.52
CSF3-201ENST00000225474 CLASP1Q7Z460 1538 aa24.51■■□□□ 1.51
CSF3-201ENST00000225474 SYNJ1O43426 1573 aa24.49■■□□□ 1.51
CSF3-201ENST00000225474 SYNJ2O15056 1496 aa24.48■■□□□ 1.51
CSF3-201ENST00000225474 WRNQ14191 1432 aaPredicted RBP eCLIP24.44■■□□□ 1.5
CSF3-201ENST00000225474 GAPVD1Q14C86 1478 aa24.42■■□□□ 1.5
CSF3-201ENST00000225474 ABCA10Q8WWZ4 1543 aa24.41■■□□□ 1.5
CSF3-201ENST00000225474 TRHP20396 242 aaPredicted RBP24.39■■□□□ 1.49
CSF3-201ENST00000225474 TOP2BQ02880 1626 aa24.36■■□□□ 1.49
CSF3-201ENST00000225474 BIVM-ERCC5R4GMW8 1640 aa24.35■■□□□ 1.49
CSF3-201ENST00000225474 PBRM1Q86U86 1689 aa24.34■■□□□ 1.49
CSF3-201ENST00000225474 ABCA5Q8WWZ7 1642 aa24.34■■□□□ 1.49
CSF3-201ENST00000225474 GRIN2AQ12879 1464 aa24.21■■□□□ 1.47
CSF3-201ENST00000225474 NUP160Q12769 1436 aa24.16■■□□□ 1.46
CSF3-201ENST00000225474 ADAMTS12P58397 1594 aa24.16■■□□□ 1.46
CSF3-201ENST00000225474 FHAD1B1AJZ9 1412 aa24.13■■□□□ 1.45
CSF3-201ENST00000225474 ERICH3Q5RHP9 1530 aa24.11■■□□□ 1.45
CSF3-201ENST00000225474 CEP170Q5SW79 1584 aa24.08■■□□□ 1.45
CSF3-201ENST00000225474 AEBP2Q6ZN18 517 aaPredicted RBP24.05■■□□□ 1.44
CSF3-201ENST00000225474 SHROOM2Q13796 1616 aa24.04■■□□□ 1.44
CSF3-201ENST00000225474 ERCC6L2Q5T890 1561 aa24.03■■□□□ 1.44
CSF3-201ENST00000225474 KIF27Q86VH2 1401 aa23.94■■□□□ 1.42
CSF3-201ENST00000225474 JPH4Q96JJ6 628 aa23.9■■□□□ 1.42
CSF3-201ENST00000225474 IGF1RP08069 1367 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms