Protein–RNA interactions for Protein: P12074

COX6A1, Cytochrome c oxidase subunit 6A1, mitochondrial, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P12074 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.16□□□□□ -0.3
COX6A1P12074 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 AC020910.6-201ENST00000623084 1459 ntBASIC13.16□□□□□ -0.3
COX6A1P12074 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.16□□□□□ -0.3
COX6A1P12074 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.16□□□□□ -0.3
COX6A1P12074 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
COX6A1P12074 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
COX6A1P12074 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.15□□□□□ -0.3
COX6A1P12074 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.15□□□□□ -0.3
COX6A1P12074 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
COX6A1P12074 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.15□□□□□ -0.3
COX6A1P12074 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
COX6A1P12074 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 KRT8P18-201ENST00000413425 1445 ntBASIC13.15□□□□□ -0.3
COX6A1P12074 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.15□□□□□ -0.3
COX6A1P12074 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
COX6A1P12074 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.15□□□□□ -0.3
COX6A1P12074 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.15□□□□□ -0.3
COX6A1P12074 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 HMGA1P1-201ENST00000415560 1062 ntBASIC13.15□□□□□ -0.3
COX6A1P12074 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC13.15□□□□□ -0.3
COX6A1P12074 RNA5SP417-201ENST00000516459 108 ntBASIC13.15□□□□□ -0.3
COX6A1P12074 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.15□□□□□ -0.3
COX6A1P12074 AC145285.5-201ENST00000562217 361 ntBASIC13.15□□□□□ -0.3
COX6A1P12074 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.15□□□□□ -0.3
COX6A1P12074 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.15□□□□□ -0.3
COX6A1P12074 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.15□□□□□ -0.3
COX6A1P12074 AC005041.3-201ENST00000606287 649 ntBASIC13.15□□□□□ -0.3
COX6A1P12074 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.15□□□□□ -0.3
COX6A1P12074 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
COX6A1P12074 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.15□□□□□ -0.3
COX6A1P12074 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
COX6A1P12074 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
COX6A1P12074 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.15□□□□□ -0.3
COX6A1P12074 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
COX6A1P12074 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
COX6A1P12074 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
COX6A1P12074 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.15□□□□□ -0.31
COX6A1P12074 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
COX6A1P12074 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 AL590824.1-201ENST00000403828 1349 ntBASIC13.14□□□□□ -0.31
COX6A1P12074 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
COX6A1P12074 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
COX6A1P12074 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
COX6A1P12074 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.14□□□□□ -0.31
COX6A1P12074 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
COX6A1P12074 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.14□□□□□ -0.31
COX6A1P12074 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.14□□□□□ -0.31
COX6A1P12074 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.14□□□□□ -0.31
COX6A1P12074 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.14□□□□□ -0.31
COX6A1P12074 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.14□□□□□ -0.31
COX6A1P12074 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
COX6A1P12074 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
COX6A1P12074 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms