RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 NISCHQ9Y2I1 1504 aa32.63■■■□□ 2.81
HMGA1P1-201ENST00000415560 CCDC180Q9P1Z9 1646 aa28.64■■■□□ 2.18
HMGA1P1-201ENST00000415560 ZCCHC6Q5VYS8 1495 aaKnown RBP27.32■■□□□ 1.96
HMGA1P1-201ENST00000415560 ABCC9O60706 1549 aa27.19■■□□□ 1.94
HMGA1P1-201ENST00000415560 DCAF8L2P0C7V8 631 aa27.1■■□□□ 1.93
HMGA1P1-201ENST00000415560 DCAF1Q9Y4B6 1507 aa27.04■■□□□ 1.92
HMGA1P1-201ENST00000415560 MYO15BQ96JP2 1530 aa26.83■■□□□ 1.89
HMGA1P1-201ENST00000415560 NACADO15069 1562 aa26.74■■□□□ 1.87
HMGA1P1-201ENST00000415560 RB1CC1Q8TDY2 1594 aa26.57■■□□□ 1.84
HMGA1P1-201ENST00000415560 SHROOM4Q9ULL8 1493 aa26.36■■□□□ 1.81
HMGA1P1-201ENST00000415560 SCRIBQ14160 1630 aa26.19■■□□□ 1.78
HMGA1P1-201ENST00000415560 UNC13AQ9UPW8 1703 aa25.94■■□□□ 1.74
HMGA1P1-201ENST00000415560 BICRAQ9NZM4 1560 aa25.63■■□□□ 1.69
HMGA1P1-201ENST00000415560 PABPN1Q86U42 306 aaKnown RBP eCLIP25.59■■□□□ 1.69
HMGA1P1-201ENST00000415560 SUPT5HO00267 1087 aaKnown RBP25.34■■□□□ 1.65
HMGA1P1-201ENST00000415560 CECR2Q9BXF3 1484 aa25.29■■□□□ 1.64
HMGA1P1-201ENST00000415560 BAZ1AQ9NRL2 1556 aaPredicted RBP25.27■■□□□ 1.64
HMGA1P1-201ENST00000415560 RSF1Q96T23 1441 aaPredicted RBP25.19■■□□□ 1.62
HMGA1P1-201ENST00000415560 MROH2BQ7Z745 1585 aa25.14■■□□□ 1.62
HMGA1P1-201ENST00000415560 SMARCA4P51532 1647 aa25.13■■□□□ 1.61
HMGA1P1-201ENST00000415560 WIZO95785 1651 aa24.95■■□□□ 1.58
HMGA1P1-201ENST00000415560 EIF4G1Q04637 1599 aaKnown RBP24.93■■□□□ 1.58
HMGA1P1-201ENST00000415560 PEG3Q9GZU2 1588 aa24.84■■□□□ 1.57
HMGA1P1-201ENST00000415560 SMARCA2P51531 1590 aa24.83■■□□□ 1.57
HMGA1P1-201ENST00000415560 ATAD2BQ9ULI0 1458 aa24.77■■□□□ 1.56
HMGA1P1-201ENST00000415560 TOP2AP11388 1531 aaKnown RBP24.72■■□□□ 1.55
HMGA1P1-201ENST00000415560 BAZ1BQ9UIG0 1483 aaKnown RBP24.66■■□□□ 1.54
HMGA1P1-201ENST00000415560 NCAPD3P42695 1498 aa24.64■■□□□ 1.53
HMGA1P1-201ENST00000415560 CC2D2AQ9P2K1 1620 aa24.63■■□□□ 1.53
HMGA1P1-201ENST00000415560 HMGXB3Q12766 1538 aa24.58■■□□□ 1.53
HMGA1P1-201ENST00000415560 CCDC88BA6NC98 1476 aa24.45■■□□□ 1.5
HMGA1P1-201ENST00000415560 CHIC1Q5VXU3 224 aa24.12■■□□□ 1.45
HMGA1P1-201ENST00000415560 DNAJC5BQ9UF47 199 aa24.12■■□□□ 1.45
HMGA1P1-201ENST00000415560 CADPSQ9ULU8 1353 aa24■■□□□ 1.43
HMGA1P1-201ENST00000415560 CFTRP13569 1480 aa24■■□□□ 1.43
HMGA1P1-201ENST00000415560 PRDM2Q13029 1718 aa23.93■■□□□ 1.42
HMGA1P1-201ENST00000415560 TRIM41Q8WV44 630 aa23.92■■□□□ 1.42
HMGA1P1-201ENST00000415560 LAMC3Q9Y6N6 1575 aa23.87■■□□□ 1.41
HMGA1P1-201ENST00000415560 ABCC8Q09428 1581 aa23.8■■□□□ 1.4
HMGA1P1-201ENST00000415560 WRNQ14191 1432 aaPredicted RBP eCLIP23.76■■□□□ 1.39
HMGA1P1-201ENST00000415560 NESP48681 1621 aa23.75■■□□□ 1.39
HMGA1P1-201ENST00000415560 PDS5BQ9NTI5 1447 aa23.73■■□□□ 1.39
HMGA1P1-201ENST00000415560 FANCD2Q9BXW9 1451 aa23.7■■□□□ 1.38
HMGA1P1-201ENST00000415560 CEP164Q9UPV0 1460 aa23.61■■□□□ 1.37
HMGA1P1-201ENST00000415560 SYNJ1O43426 1573 aa23.6■■□□□ 1.37
HMGA1P1-201ENST00000415560 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
HMGA1P1-201ENST00000415560 BIVM-ERCC5R4GMW8 1640 aa23.59■■□□□ 1.37
HMGA1P1-201ENST00000415560 KIF21AQ7Z4S6 1674 aa23.53■■□□□ 1.36
HMGA1P1-201ENST00000415560 CUX1P39880 1505 aa23.53■■□□□ 1.36
HMGA1P1-201ENST00000415560 DNMBPQ6XZF7 1577 aa23.47■■□□□ 1.35
HMGA1P1-201ENST00000415560 ERCC6Q03468 1493 aa23.43■■□□□ 1.34
HMGA1P1-201ENST00000415560 TOPBP1Q92547 1522 aa23.41■■□□□ 1.34
HMGA1P1-201ENST00000415560 FAM9AQ8IZU1 332 aaPredicted RBP23.39■■□□□ 1.33
HMGA1P1-201ENST00000415560 EEA1Q15075 1411 aa23.39■■□□□ 1.33
HMGA1P1-201ENST00000415560 MRC2Q9UBG0 1479 aa23.37■■□□□ 1.33
HMGA1P1-201ENST00000415560 URB2Q14146 1524 aaKnown RBP23.37■■□□□ 1.33
HMGA1P1-201ENST00000415560 FGD5Q6ZNL6 1462 aa23.34■■□□□ 1.33
HMGA1P1-201ENST00000415560 SOGA1O94964 1423 aa23.32■■□□□ 1.32
HMGA1P1-201ENST00000415560 CSRNP3Q8WYN3 585 aa23.26■■□□□ 1.31
HMGA1P1-201ENST00000415560 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
HMGA1P1-201ENST00000415560 WDR62O43379 1518 aa23.23■■□□□ 1.31
HMGA1P1-201ENST00000415560 KIF27Q86VH2 1401 aa23.23■■□□□ 1.31
HMGA1P1-201ENST00000415560 RUSC2Q8N2Y8 1516 aa23.21■■□□□ 1.31
HMGA1P1-201ENST00000415560 THOC2Q8NI27 1593 aaKnown RBP23.18■■□□□ 1.3
HMGA1P1-201ENST00000415560 CUX2O14529 1486 aa23.17■■□□□ 1.3
HMGA1P1-201ENST00000415560 RAD54L2Q9Y4B4 1467 aa23.17■■□□□ 1.3
HMGA1P1-201ENST00000415560 ABCA10Q8WWZ4 1543 aa23.16■■□□□ 1.3
HMGA1P1-201ENST00000415560 LOC105371045A0A1W2PR82 267 aa23.15■■□□□ 1.3
HMGA1P1-201ENST00000415560 IFT140Q96RY7 1462 aa23.08■■□□□ 1.29
HMGA1P1-201ENST00000415560 WDR97A6NE52 1622 aa23.08■■□□□ 1.28
HMGA1P1-201ENST00000415560 TARBP1Q13395 1621 aaKnown RBP23.06■■□□□ 1.28
HMGA1P1-201ENST00000415560 KIF21BO75037 1637 aa23.02■■□□□ 1.28
HMGA1P1-201ENST00000415560 EHMT2Q96KQ7 1210 aa23.01■■□□□ 1.27
HMGA1P1-201ENST00000415560 IGF1RP08069 1367 aa23■■□□□ 1.27
HMGA1P1-201ENST00000415560 GOLGA3Q08378 1498 aa22.99■■□□□ 1.27
HMGA1P1-201ENST00000415560 TDRD9Q8NDG6 1382 aaKnown RBP22.99■■□□□ 1.27
HMGA1P1-201ENST00000415560 GAPVD1Q14C86 1478 aa22.98■■□□□ 1.27
HMGA1P1-201ENST00000415560 UBTFP17480 764 aaKnown RBP22.96■■□□□ 1.27
HMGA1P1-201ENST00000415560 ABCA5Q8WWZ7 1642 aa22.96■■□□□ 1.27
HMGA1P1-201ENST00000415560 PRXQ9BXM0 1461 aa22.93■■□□□ 1.26
HMGA1P1-201ENST00000415560 ERICH3Q5RHP9 1530 aa22.92■■□□□ 1.26
HMGA1P1-201ENST00000415560 CARMIL1Q5VZK9 1371 aa22.91■■□□□ 1.26
HMGA1P1-201ENST00000415560 CUL7Q14999 1698 aa22.9■■□□□ 1.26
HMGA1P1-201ENST00000415560 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.25
HMGA1P1-201ENST00000415560 AQRO60306 1485 aaKnown RBP eCLIP22.87■■□□□ 1.25
HMGA1P1-201ENST00000415560 RAPGEF2Q9Y4G8 1499 aa22.86■■□□□ 1.25
HMGA1P1-201ENST00000415560 PBRM1Q86U86 1689 aa22.86■■□□□ 1.25
HMGA1P1-201ENST00000415560 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
HMGA1P1-201ENST00000415560 ZNF608Q9ULD9 1512 aaPredicted RBP22.83■■□□□ 1.25
HMGA1P1-201ENST00000415560 EIF4G3O43432 1585 aaKnown RBP22.8■■□□□ 1.24
HMGA1P1-201ENST00000415560 FHAD1B1AJZ9 1412 aa22.74■■□□□ 1.23
HMGA1P1-201ENST00000415560 MAGI1Q96QZ7 1491 aaPredicted RBP22.68■■□□□ 1.22
HMGA1P1-201ENST00000415560 ADAMTS12P58397 1594 aa22.67■■□□□ 1.22
HMGA1P1-201ENST00000415560 CEP162Q5TB80 1403 aa22.67■■□□□ 1.22
HMGA1P1-201ENST00000415560 SNAPC4Q5SXM2 1469 aa22.66■■□□□ 1.22
HMGA1P1-201ENST00000415560 CHMP7Q8WUX9 453 aaPredicted RBP22.61■■□□□ 1.21
HMGA1P1-201ENST00000415560 CLIP1P30622 1438 aa22.6■■□□□ 1.21
HMGA1P1-201ENST00000415560 CTTNBP2Q8WZ74 1663 aa22.6■■□□□ 1.21
HMGA1P1-201ENST00000415560 SYNJ2O15056 1496 aa22.59■■□□□ 1.21
HMGA1P1-201ENST00000415560 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms