RNA–Protein interactions for RNA: ENST00000347703.7

CDCA7-202, Transcript of cell division cycle associated 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA7, Length 2,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-202ENST00000347703 NISCHQ9Y2I1 1504 aa31.57■■■□□ 2.64
CDCA7-202ENST00000347703 CCDC180Q9P1Z9 1646 aa26.93■■□□□ 1.9
CDCA7-202ENST00000347703 SHROOM4Q9ULL8 1493 aa26.9■■□□□ 1.9
CDCA7-202ENST00000347703 ZCCHC6Q5VYS8 1495 aaKnown RBP26.63■■□□□ 1.85
CDCA7-202ENST00000347703 DCAF8L2P0C7V8 631 aa26.47■■□□□ 1.83
CDCA7-202ENST00000347703 SUPT5HO00267 1087 aaKnown RBP26.18■■□□□ 1.78
CDCA7-202ENST00000347703 DCAF1Q9Y4B6 1507 aa25.78■■□□□ 1.72
CDCA7-202ENST00000347703 ABCC9O60706 1549 aa25.41■■□□□ 1.66
CDCA7-202ENST00000347703 SCRIBQ14160 1630 aa25.36■■□□□ 1.65
CDCA7-202ENST00000347703 CHIC1Q5VXU3 224 aa25.2■■□□□ 1.62
CDCA7-202ENST00000347703 MYO15BQ96JP2 1530 aa25.12■■□□□ 1.61
CDCA7-202ENST00000347703 NACADO15069 1562 aa24.97■■□□□ 1.59
CDCA7-202ENST00000347703 RSF1Q96T23 1441 aaPredicted RBP24.89■■□□□ 1.57
CDCA7-202ENST00000347703 CECR2Q9BXF3 1484 aa24.75■■□□□ 1.55
CDCA7-202ENST00000347703 RB1CC1Q8TDY2 1594 aa24.67■■□□□ 1.54
CDCA7-202ENST00000347703 MROH2BQ7Z745 1585 aa24.6■■□□□ 1.53
CDCA7-202ENST00000347703 LOC105371045A0A1W2PR82 267 aa24.56■■□□□ 1.52
CDCA7-202ENST00000347703 WIZO95785 1651 aa24.48■■□□□ 1.51
CDCA7-202ENST00000347703 UNC13AQ9UPW8 1703 aa24.42■■□□□ 1.5
CDCA7-202ENST00000347703 TRIM41Q8WV44 630 aa24.32■■□□□ 1.48
CDCA7-202ENST00000347703 PABPN1Q86U42 306 aaKnown RBP eCLIP24.28■■□□□ 1.483e-6■■■■□ 22
CDCA7-202ENST00000347703 FAM9AQ8IZU1 332 aaPredicted RBP24.25■■□□□ 1.47
CDCA7-202ENST00000347703 BAZ1AQ9NRL2 1556 aaPredicted RBP24.24■■□□□ 1.47
CDCA7-202ENST00000347703 EHMT2Q96KQ7 1210 aa24.17■■□□□ 1.46
CDCA7-202ENST00000347703 PCGF6Q9BYE7 350 aa24.16■■□□□ 1.46
CDCA7-202ENST00000347703 SMARCA4P51532 1647 aa24.13■■□□□ 1.45
CDCA7-202ENST00000347703 BICRAQ9NZM4 1560 aa24.08■■□□□ 1.44
CDCA7-202ENST00000347703 TOP2AP11388 1531 aaKnown RBP23.98■■□□□ 1.43
CDCA7-202ENST00000347703 CCDC88BA6NC98 1476 aa23.93■■□□□ 1.42
CDCA7-202ENST00000347703 EIF4G1Q04637 1599 aaKnown RBP23.93■■□□□ 1.42
CDCA7-202ENST00000347703 SMARCA2P51531 1590 aa23.89■■□□□ 1.41
CDCA7-202ENST00000347703 ABCC8Q09428 1581 aa23.86■■□□□ 1.41
CDCA7-202ENST00000347703 HRCP23327 699 aa23.82■■□□□ 1.4
CDCA7-202ENST00000347703 TRIM26Q12899 539 aaPredicted RBP23.65■■□□□ 1.38
CDCA7-202ENST00000347703 PEG3Q9GZU2 1588 aa23.6■■□□□ 1.37
CDCA7-202ENST00000347703 ATAD2BQ9ULI0 1458 aa23.58■■□□□ 1.37
CDCA7-202ENST00000347703 PPARGC1BQ86YN6 1023 aaKnown RBP23.58■■□□□ 1.37
CDCA7-202ENST00000347703 SOGA1O94964 1423 aa23.53■■□□□ 1.36
CDCA7-202ENST00000347703 BAZ1BQ9UIG0 1483 aaKnown RBP23.51■■□□□ 1.35
CDCA7-202ENST00000347703 RUSC2Q8N2Y8 1516 aa23.47■■□□□ 1.35
CDCA7-202ENST00000347703 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
CDCA7-202ENST00000347703 SYNJ1O43426 1573 aa23.34■■□□□ 1.33
CDCA7-202ENST00000347703 CSRNP3Q8WYN3 585 aa23.29■■□□□ 1.32
CDCA7-202ENST00000347703 TTBK1Q5TCY1 1321 aaPredicted RBP23.27■■□□□ 1.32
CDCA7-202ENST00000347703 UBTFP17480 764 aaKnown RBP23.24■■□□□ 1.31
CDCA7-202ENST00000347703 CEP162Q5TB80 1403 aa23.22■■□□□ 1.31
CDCA7-202ENST00000347703 EEA1Q15075 1411 aa23.15■■□□□ 1.3
CDCA7-202ENST00000347703 TNIKQ9UKE5 1360 aa23.13■■□□□ 1.29
CDCA7-202ENST00000347703 NCAPD3P42695 1498 aa23.12■■□□□ 1.29
CDCA7-202ENST00000347703 HMGXB3Q12766 1538 aa23.08■■□□□ 1.29
CDCA7-202ENST00000347703 GOLGA3Q08378 1498 aa23.08■■□□□ 1.28
CDCA7-202ENST00000347703 RANGAP1P46060 587 aaPredicted RBP23.03■■□□□ 1.28
CDCA7-202ENST00000347703 TOP2BQ02880 1626 aa23■■□□□ 1.27
CDCA7-202ENST00000347703 CEP164Q9UPV0 1460 aa22.97■■□□□ 1.27
CDCA7-202ENST00000347703 RAPGEF2Q9Y4G8 1499 aa22.95■■□□□ 1.27
CDCA7-202ENST00000347703 KIF21BO75037 1637 aa22.94■■□□□ 1.26
CDCA7-202ENST00000347703 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.93■■□□□ 1.26
CDCA7-202ENST00000347703 BIVM-ERCC5R4GMW8 1640 aa22.92■■□□□ 1.26
CDCA7-202ENST00000347703 CUX1P39880 1505 aa22.91■■□□□ 1.26
CDCA7-202ENST00000347703 CFTRP13569 1480 aa22.88■■□□□ 1.25
CDCA7-202ENST00000347703 ZEB1P37275 1124 aaPredicted RBP22.86■■□□□ 1.25
CDCA7-202ENST00000347703 CLIP1P30622 1438 aa22.84■■□□□ 1.25
CDCA7-202ENST00000347703 CC2D2AQ9P2K1 1620 aa22.83■■□□□ 1.25
CDCA7-202ENST00000347703 CCER1Q8TC90 406 aaPredicted RBP22.77■■□□□ 1.24
CDCA7-202ENST00000347703 CADPSQ9ULU8 1353 aa22.7■■□□□ 1.22
CDCA7-202ENST00000347703 PRDM2Q13029 1718 aa22.68■■□□□ 1.22
CDCA7-202ENST00000347703 PRXQ9BXM0 1461 aa22.68■■□□□ 1.22
CDCA7-202ENST00000347703 VPS8Q8N3P4 1428 aa22.67■■□□□ 1.22
CDCA7-202ENST00000347703 KIF27Q86VH2 1401 aa22.66■■□□□ 1.22
CDCA7-202ENST00000347703 ERICH3Q5RHP9 1530 aa22.59■■□□□ 1.21
CDCA7-202ENST00000347703 HNRNPUL2Q1KMD3 747 aaKnown RBP22.59■■□□□ 1.21
CDCA7-202ENST00000347703 CUX2O14529 1486 aa22.57■■□□□ 1.2
CDCA7-202ENST00000347703 APLP2Q06481 763 aa22.57■■□□□ 1.2
CDCA7-202ENST00000347703 NESP48681 1621 aa22.56■■□□□ 1.2
CDCA7-202ENST00000347703 FGD5Q6ZNL6 1462 aa22.55■■□□□ 1.2
CDCA7-202ENST00000347703 ARAP1Q96P48 1450 aa22.53■■□□□ 1.2
CDCA7-202ENST00000347703 FANCD2Q9BXW9 1451 aa22.51■■□□□ 1.19
CDCA7-202ENST00000347703 DNAJC5BQ9UF47 199 aa22.51■■□□□ 1.19
CDCA7-202ENST00000347703 IGF1RP08069 1367 aa22.47■■□□□ 1.19
CDCA7-202ENST00000347703 KANK4Q5T7N3 995 aaPredicted RBP22.43■■□□□ 1.18
CDCA7-202ENST00000347703 RAD54L2Q9Y4B4 1467 aa22.42■■□□□ 1.18
CDCA7-202ENST00000347703 ARHGAP35Q9NRY4 1499 aa22.39■■□□□ 1.17
CDCA7-202ENST00000347703 CARMIL1Q5VZK9 1371 aa22.38■■□□□ 1.17
CDCA7-202ENST00000347703 TOPBP1Q92547 1522 aa22.33■■□□□ 1.17
CDCA7-202ENST00000347703 DNMBPQ6XZF7 1577 aa22.31■■□□□ 1.16
CDCA7-202ENST00000347703 POLA1P09884 1462 aaPredicted RBP22.31■■□□□ 1.16
CDCA7-202ENST00000347703 P3H3Q8IVL6 736 aa22.29■■□□□ 1.16
CDCA7-202ENST00000347703 URB2Q14146 1524 aaKnown RBP22.24■■□□□ 1.15
CDCA7-202ENST00000347703 ABCA10Q8WWZ4 1543 aa22.2■■□□□ 1.14
CDCA7-202ENST00000347703 LAMC3Q9Y6N6 1575 aa22.19■■□□□ 1.14
CDCA7-202ENST00000347703 ITGAEP38570 1179 aa22.17■■□□□ 1.14
CDCA7-202ENST00000347703 TDRD9Q8NDG6 1382 aaKnown RBP22.16■■□□□ 1.14
CDCA7-202ENST00000347703 ATP1B4Q9UN42 357 aaPredicted RBP22.16■■□□□ 1.14
CDCA7-202ENST00000347703 KIF21AQ7Z4S6 1674 aa22.14■■□□□ 1.13
CDCA7-202ENST00000347703 DIEXFQ68CQ4 756 aaKnown RBP22.1■■□□□ 1.13
CDCA7-202ENST00000347703 FHOD3Q2V2M9 1422 aa22.09■■□□□ 1.13
CDCA7-202ENST00000347703 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
CDCA7-202ENST00000347703 RRBP1Q9P2E9 1410 aaKnown RBP22.07■■□□□ 1.12
CDCA7-202ENST00000347703 WDR97A6NE52 1622 aa22.06■■□□□ 1.12
CDCA7-202ENST00000347703 TIAM1Q13009 1591 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 771.5 ms