Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.19■□□□□ 0.34
CHGBP05060 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17.19■□□□□ 0.34
CHGBP05060 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.19■□□□□ 0.34
CHGBP05060 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.19■□□□□ 0.34
CHGBP05060 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CHGBP05060 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHGBP05060 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.18■□□□□ 0.34
CHGBP05060 AC007952.5-201ENST00000572818 1486 ntBASIC17.18■□□□□ 0.34
CHGBP05060 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHGBP05060 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CHGBP05060 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CHGBP05060 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHGBP05060 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC17.18■□□□□ 0.34
CHGBP05060 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHGBP05060 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CHGBP05060 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHGBP05060 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHGBP05060 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHGBP05060 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.18■□□□□ 0.34
CHGBP05060 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC17.18■□□□□ 0.34
CHGBP05060 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.18■□□□□ 0.34
CHGBP05060 AC026320.2-201ENST00000434379 478 ntBASIC17.18■□□□□ 0.34
CHGBP05060 RPSAP15-201ENST00000448168 861 ntBASIC17.18■□□□□ 0.34
CHGBP05060 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHGBP05060 UPF3AP2-201ENST00000457924 1132 ntBASIC17.18■□□□□ 0.34
CHGBP05060 NDUFS6P1-201ENST00000485187 316 ntBASIC17.18■□□□□ 0.34
CHGBP05060 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHGBP05060 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.18■□□□□ 0.34
CHGBP05060 RN7SL67P-201ENST00000492147 296 ntBASIC17.18■□□□□ 0.34
CHGBP05060 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.18■□□□□ 0.34
CHGBP05060 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.18■□□□□ 0.34
CHGBP05060 AC140658.4-201ENST00000561990 352 ntBASIC17.18■□□□□ 0.34
CHGBP05060 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.18■□□□□ 0.34
CHGBP05060 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.18■□□□□ 0.34
CHGBP05060 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHGBP05060 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHGBP05060 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHGBP05060 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHGBP05060 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHGBP05060 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHGBP05060 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CHGBP05060 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHGBP05060 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CHGBP05060 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CHGBP05060 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC17.18■□□□□ 0.34
CHGBP05060 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CHGBP05060 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.17■□□□□ 0.34
CHGBP05060 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC17.17■□□□□ 0.34
CHGBP05060 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
CHGBP05060 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CHGBP05060 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC17.17■□□□□ 0.34
CHGBP05060 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.17■□□□□ 0.34
CHGBP05060 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 AC007274.2-201ENST00000421675 662 ntBASIC17.17■□□□□ 0.34
CHGBP05060 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.17■□□□□ 0.34
CHGBP05060 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.17■□□□□ 0.34
CHGBP05060 AL133466.1-201ENST00000447582 150 ntBASIC17.17■□□□□ 0.34
CHGBP05060 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.17■□□□□ 0.34
CHGBP05060 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.17■□□□□ 0.34
CHGBP05060 RNA5SP423-201ENST00000517127 109 ntBASIC17.17■□□□□ 0.34
CHGBP05060 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.17■□□□□ 0.34
CHGBP05060 MIR3907-201ENST00000579424 151 ntBASIC17.17■□□□□ 0.34
CHGBP05060 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.17■□□□□ 0.34
CHGBP05060 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC17.17■□□□□ 0.34
CHGBP05060 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.17■□□□□ 0.34
CHGBP05060 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
CHGBP05060 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CHGBP05060 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CHGBP05060 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHGBP05060 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.17■□□□□ 0.34
CHGBP05060 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CHGBP05060 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC17.16■□□□□ 0.34
CHGBP05060 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms