RNA–Protein interactions for RNA: ENST00000487082.5

PRKRA-211, Transcript of protein activator of interferon induced protein kinase EIF2AK2, humanhuman

TSL 1 (best) BASIC

Gene PRKRA, Length 1,211 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKRA-211ENST00000487082 NISCHQ9Y2I1 1504 aa35.38■■■■□ 3.25
PRKRA-211ENST00000487082 CCDC180Q9P1Z9 1646 aa31.71■■■□□ 2.67
PRKRA-211ENST00000487082 ABCC9O60706 1549 aa31.31■■■□□ 2.6
PRKRA-211ENST00000487082 RB1CC1Q8TDY2 1594 aa29.98■■■□□ 2.39
PRKRA-211ENST00000487082 NACADO15069 1562 aa29.86■■■□□ 2.37
PRKRA-211ENST00000487082 MYO15BQ96JP2 1530 aa29.58■■■□□ 2.33
PRKRA-211ENST00000487082 DCAF8L2P0C7V8 631 aa29.53■■■□□ 2.32
PRKRA-211ENST00000487082 UNC13AQ9UPW8 1703 aa29.42■■■□□ 2.3
PRKRA-211ENST00000487082 ZCCHC6Q5VYS8 1495 aaKnown RBP29.41■■■□□ 2.3
PRKRA-211ENST00000487082 DCAF1Q9Y4B6 1507 aa29.3■■■□□ 2.28
PRKRA-211ENST00000487082 BICRAQ9NZM4 1560 aa29.16■■■□□ 2.26
PRKRA-211ENST00000487082 DNAJC5BQ9UF47 199 aa29.15■■■□□ 2.26
PRKRA-211ENST00000487082 PABPN1Q86U42 306 aaKnown RBP eCLIP29.13■■■□□ 2.25
PRKRA-211ENST00000487082 SCRIBQ14160 1630 aa28.82■■■□□ 2.2
PRKRA-211ENST00000487082 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
PRKRA-211ENST00000487082 EIF4G1Q04637 1599 aaKnown RBP28.38■■■□□ 2.13
PRKRA-211ENST00000487082 CC2D2AQ9P2K1 1620 aa28.37■■■□□ 2.13
PRKRA-211ENST00000487082 CECR2Q9BXF3 1484 aa28.19■■■□□ 2.1
PRKRA-211ENST00000487082 SMARCA4P51532 1647 aa27.57■■■□□ 2
PRKRA-211ENST00000487082 NCAPD3P42695 1498 aa27.55■■■□□ 2
PRKRA-211ENST00000487082 ATAD2BQ9ULI0 1458 aa27.49■■□□□ 1.99
PRKRA-211ENST00000487082 BAZ1AQ9NRL2 1556 aaPredicted RBP27.44■■□□□ 1.98
PRKRA-211ENST00000487082 SMARCA2P51531 1590 aa27.43■■□□□ 1.98
PRKRA-211ENST00000487082 HMGXB3Q12766 1538 aa27.41■■□□□ 1.98
PRKRA-211ENST00000487082 PEG3Q9GZU2 1588 aa27.34■■□□□ 1.97
PRKRA-211ENST00000487082 MROH2BQ7Z745 1585 aa27.26■■□□□ 1.95
PRKRA-211ENST00000487082 BAZ1BQ9UIG0 1483 aaKnown RBP27.21■■□□□ 1.95
PRKRA-211ENST00000487082 NESP48681 1621 aa27.01■■□□□ 1.91
PRKRA-211ENST00000487082 ERCC6Q03468 1493 aa26.98■■□□□ 1.91
PRKRA-211ENST00000487082 WIZO95785 1651 aa26.96■■□□□ 1.91
PRKRA-211ENST00000487082 CUX2O14529 1486 aa26.93■■□□□ 1.9
PRKRA-211ENST00000487082 LAMC3Q9Y6N6 1575 aa26.91■■□□□ 1.9
PRKRA-211ENST00000487082 THOC2Q8NI27 1593 aaKnown RBP26.76■■□□□ 1.87
PRKRA-211ENST00000487082 RSF1Q96T23 1441 aaPredicted RBP26.76■■□□□ 1.87
PRKRA-211ENST00000487082 KIF21AQ7Z4S6 1674 aa26.74■■□□□ 1.87
PRKRA-211ENST00000487082 CADPSQ9ULU8 1353 aa26.68■■□□□ 1.86
PRKRA-211ENST00000487082 PDS5BQ9NTI5 1447 aa26.66■■□□□ 1.86
PRKRA-211ENST00000487082 TOP2AP11388 1531 aaKnown RBP26.64■■□□□ 1.85
PRKRA-211ENST00000487082 DNAJC5Q9H3Z4 198 aa26.56■■□□□ 1.84
PRKRA-211ENST00000487082 CFTRP13569 1480 aa26.47■■□□□ 1.83
PRKRA-211ENST00000487082 MRC2Q9UBG0 1479 aa26.45■■□□□ 1.82
PRKRA-211ENST00000487082 WDR62O43379 1518 aa26.43■■□□□ 1.82
PRKRA-211ENST00000487082 CEP164Q9UPV0 1460 aa26.39■■□□□ 1.82
PRKRA-211ENST00000487082 FANCD2Q9BXW9 1451 aa26.38■■□□□ 1.81
PRKRA-211ENST00000487082 PRDM2Q13029 1718 aa26.34■■□□□ 1.81
PRKRA-211ENST00000487082 CCDC88BA6NC98 1476 aa26.3■■□□□ 1.8
PRKRA-211ENST00000487082 URB2Q14146 1524 aaKnown RBP26.18■■□□□ 1.78
PRKRA-211ENST00000487082 TOPBP1Q92547 1522 aa25.94■■□□□ 1.74
PRKRA-211ENST00000487082 ABCC8Q09428 1581 aa25.89■■□□□ 1.73
PRKRA-211ENST00000487082 DNMBPQ6XZF7 1577 aa25.89■■□□□ 1.73
PRKRA-211ENST00000487082 IFT140Q96RY7 1462 aa25.85■■□□□ 1.73
PRKRA-211ENST00000487082 ZNF608Q9ULD9 1512 aaPredicted RBP25.79■■□□□ 1.72
PRKRA-211ENST00000487082 TARBP1Q13395 1621 aaKnown RBP25.74■■□□□ 1.71
PRKRA-211ENST00000487082 EIF4G3O43432 1585 aaKnown RBP25.71■■□□□ 1.71
PRKRA-211ENST00000487082 SUPT5HO00267 1087 aaKnown RBP25.7■■□□□ 1.7
PRKRA-211ENST00000487082 POLA1P09884 1462 aaPredicted RBP25.69■■□□□ 1.7
PRKRA-211ENST00000487082 OSCARQ8IYS5 282 aa25.64■■□□□ 1.7
PRKRA-211ENST00000487082 CUX1P39880 1505 aa25.59■■□□□ 1.69
PRKRA-211ENST00000487082 AQRO60306 1485 aaKnown RBP eCLIP25.56■■□□□ 1.68
PRKRA-211ENST00000487082 FGD5Q6ZNL6 1462 aa25.56■■□□□ 1.68
PRKRA-211ENST00000487082 RAD54L2Q9Y4B4 1467 aa25.56■■□□□ 1.68
PRKRA-211ENST00000487082 SOGA1O94964 1423 aa25.53■■□□□ 1.68
PRKRA-211ENST00000487082 WDR97A6NE52 1622 aa25.51■■□□□ 1.67
PRKRA-211ENST00000487082 CHD1O14646 1710 aa25.5■■□□□ 1.67
PRKRA-211ENST00000487082 TDRD9Q8NDG6 1382 aaKnown RBP25.43■■□□□ 1.66
PRKRA-211ENST00000487082 TRIM41Q8WV44 630 aa25.4■■□□□ 1.66
PRKRA-211ENST00000487082 RIMBP3CA6NJZ7 1639 aa25.4■■□□□ 1.66
PRKRA-211ENST00000487082 RIMBP3BA6NNM3 1639 aa25.4■■□□□ 1.66
PRKRA-211ENST00000487082 RIMBP3Q9UFD9 1639 aa25.4■■□□□ 1.66
PRKRA-211ENST00000487082 SNAPC4Q5SXM2 1469 aa25.33■■□□□ 1.65
PRKRA-211ENST00000487082 ARHGEF11O15085 1522 aa25.32■■□□□ 1.64
PRKRA-211ENST00000487082 BIVM-ERCC5R4GMW8 1640 aa25.31■■□□□ 1.64
PRKRA-211ENST00000487082 PBRM1Q86U86 1689 aa25.31■■□□□ 1.64
PRKRA-211ENST00000487082 ABCA10Q8WWZ4 1543 aa25.31■■□□□ 1.64
PRKRA-211ENST00000487082 GRIN2BQ13224 1484 aa25.3■■□□□ 1.64
PRKRA-211ENST00000487082 MAGI1Q96QZ7 1491 aaPredicted RBP25.3■■□□□ 1.64
PRKRA-211ENST00000487082 ABCA5Q8WWZ7 1642 aa25.29■■□□□ 1.64
PRKRA-211ENST00000487082 TOP2BQ02880 1626 aa25.28■■□□□ 1.64
PRKRA-211ENST00000487082 SYNJ1O43426 1573 aa25.25■■□□□ 1.63
PRKRA-211ENST00000487082 GAPVD1Q14C86 1478 aa25.24■■□□□ 1.63
PRKRA-211ENST00000487082 WRNQ14191 1432 aaPredicted RBP eCLIP25.23■■□□□ 1.63
PRKRA-211ENST00000487082 FBLN2P98095 1184 aa25.23■■□□□ 1.63
PRKRA-211ENST00000487082 CLASP1Q7Z460 1538 aa25.2■■□□□ 1.62
PRKRA-211ENST00000487082 SYNJ2O15056 1496 aa25.2■■□□□ 1.62
PRKRA-211ENST00000487082 CHMP7Q8WUX9 453 aaPredicted RBP25.12■■□□□ 1.61
PRKRA-211ENST00000487082 ARAP1Q96P48 1450 aa25.1■■□□□ 1.61
PRKRA-211ENST00000487082 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
PRKRA-211ENST00000487082 CYB5RLQ6IPT4 315 aa25.01■■□□□ 1.59
PRKRA-211ENST00000487082 GRIN2AQ12879 1464 aa25■■□□□ 1.59
PRKRA-211ENST00000487082 ERICH3Q5RHP9 1530 aa24.99■■□□□ 1.59
PRKRA-211ENST00000487082 FHAD1B1AJZ9 1412 aa24.94■■□□□ 1.58
PRKRA-211ENST00000487082 CEP170Q5SW79 1584 aa24.93■■□□□ 1.58
PRKRA-211ENST00000487082 NUP160Q12769 1436 aa24.92■■□□□ 1.58
PRKRA-211ENST00000487082 SHROOM2Q13796 1616 aa24.84■■□□□ 1.57
PRKRA-211ENST00000487082 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
PRKRA-211ENST00000487082 KIF27Q86VH2 1401 aa24.71■■□□□ 1.55
PRKRA-211ENST00000487082 RUSC2Q8N2Y8 1516 aa24.71■■□□□ 1.55
PRKRA-211ENST00000487082 CUL7Q14999 1698 aa24.7■■□□□ 1.54
PRKRA-211ENST00000487082 IGF1RP08069 1367 aa24.68■■□□□ 1.54
PRKRA-211ENST00000487082 TRHP20396 242 aaPredicted RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms