RNA–Protein interactions for RNA: ENST00000561510.5

LINC01229-201, Transcript of long intergenic non-protein coding RNA 1229, humanhuman

TSL 5 BASIC

Gene LINC01229, Length 1,494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01229-201ENST00000561510 NISCHQ9Y2I1 1504 aa34.52■■■■□ 3.12
LINC01229-201ENST00000561510 CCDC180Q9P1Z9 1646 aa30.63■■■□□ 2.49
LINC01229-201ENST00000561510 ABCC9O60706 1549 aa30.11■■■□□ 2.41
LINC01229-201ENST00000561510 DCAF8L2P0C7V8 631 aa28.93■■■□□ 2.22
LINC01229-201ENST00000561510 RB1CC1Q8TDY2 1594 aa28.89■■■□□ 2.22
LINC01229-201ENST00000561510 NACADO15069 1562 aa28.85■■■□□ 2.21
LINC01229-201ENST00000561510 ZCCHC6Q5VYS8 1495 aaKnown RBP28.73■■■□□ 2.19
LINC01229-201ENST00000561510 MYO15BQ96JP2 1530 aa28.66■■■□□ 2.18
LINC01229-201ENST00000561510 DCAF1Q9Y4B6 1507 aa28.53■■■□□ 2.16
LINC01229-201ENST00000561510 UNC13AQ9UPW8 1703 aa28.2■■■□□ 2.1
LINC01229-201ENST00000561510 PABPN1Q86U42 306 aaKnown RBP eCLIP28.18■■■□□ 2.1
LINC01229-201ENST00000561510 BICRAQ9NZM4 1560 aa28.04■■■□□ 2.08
LINC01229-201ENST00000561510 SCRIBQ14160 1630 aa28■■■□□ 2.07
LINC01229-201ENST00000561510 DNAJC5BQ9UF47 199 aa27.74■■■□□ 2.03
LINC01229-201ENST00000561510 SHROOM4Q9ULL8 1493 aa27.7■■■□□ 2.02
LINC01229-201ENST00000561510 EIF4G1Q04637 1599 aaKnown RBP27.3■■□□□ 1.96
LINC01229-201ENST00000561510 CC2D2AQ9P2K1 1620 aa27.2■■□□□ 1.95
LINC01229-201ENST00000561510 CECR2Q9BXF3 1484 aa27.06■■□□□ 1.92
LINC01229-201ENST00000561510 SMARCA4P51532 1647 aa26.76■■□□□ 1.87
LINC01229-201ENST00000561510 BAZ1AQ9NRL2 1556 aaPredicted RBP26.74■■□□□ 1.87
LINC01229-201ENST00000561510 ATAD2BQ9ULI0 1458 aa26.68■■□□□ 1.86
LINC01229-201ENST00000561510 NCAPD3P42695 1498 aa26.66■■□□□ 1.86
LINC01229-201ENST00000561510 MROH2BQ7Z745 1585 aa26.61■■□□□ 1.85
LINC01229-201ENST00000561510 SMARCA2P51531 1590 aa26.6■■□□□ 1.85
LINC01229-201ENST00000561510 PEG3Q9GZU2 1588 aa26.5■■□□□ 1.83
LINC01229-201ENST00000561510 HMGXB3Q12766 1538 aa26.48■■□□□ 1.83
LINC01229-201ENST00000561510 BAZ1BQ9UIG0 1483 aaKnown RBP26.43■■□□□ 1.82
LINC01229-201ENST00000561510 RSF1Q96T23 1441 aaPredicted RBP26.31■■□□□ 1.8
LINC01229-201ENST00000561510 WIZO95785 1651 aa26.3■■□□□ 1.8
LINC01229-201ENST00000561510 NESP48681 1621 aa26.05■■□□□ 1.76
LINC01229-201ENST00000561510 TOP2AP11388 1531 aaKnown RBP26.01■■□□□ 1.75
LINC01229-201ENST00000561510 ERCC6Q03468 1493 aa25.94■■□□□ 1.74
LINC01229-201ENST00000561510 LAMC3Q9Y6N6 1575 aa25.93■■□□□ 1.74
LINC01229-201ENST00000561510 CADPSQ9ULU8 1353 aa25.9■■□□□ 1.74
LINC01229-201ENST00000561510 PDS5BQ9NTI5 1447 aa25.79■■□□□ 1.72
LINC01229-201ENST00000561510 CCDC88BA6NC98 1476 aa25.75■■□□□ 1.71
LINC01229-201ENST00000561510 CFTRP13569 1480 aa25.72■■□□□ 1.71
LINC01229-201ENST00000561510 KIF21AQ7Z4S6 1674 aa25.67■■□□□ 1.7
LINC01229-201ENST00000561510 CUX2O14529 1486 aa25.66■■□□□ 1.7
LINC01229-201ENST00000561510 SUPT5HO00267 1087 aaKnown RBP25.66■■□□□ 1.7
LINC01229-201ENST00000561510 THOC2Q8NI27 1593 aaKnown RBP25.6■■□□□ 1.69
LINC01229-201ENST00000561510 FANCD2Q9BXW9 1451 aa25.58■■□□□ 1.69
LINC01229-201ENST00000561510 CEP164Q9UPV0 1460 aa25.53■■□□□ 1.68
LINC01229-201ENST00000561510 MRC2Q9UBG0 1479 aa25.51■■□□□ 1.67
LINC01229-201ENST00000561510 WDR62O43379 1518 aa25.42■■□□□ 1.66
LINC01229-201ENST00000561510 PRDM2Q13029 1718 aa25.4■■□□□ 1.66
LINC01229-201ENST00000561510 URB2Q14146 1524 aaKnown RBP25.33■■□□□ 1.65
LINC01229-201ENST00000561510 TOPBP1Q92547 1522 aa25.16■■□□□ 1.62
LINC01229-201ENST00000561510 ABCC8Q09428 1581 aa25.14■■□□□ 1.61
LINC01229-201ENST00000561510 DNMBPQ6XZF7 1577 aa25.11■■□□□ 1.61
LINC01229-201ENST00000561510 IFT140Q96RY7 1462 aa25.01■■□□□ 1.59
LINC01229-201ENST00000561510 DNAJC5Q9H3Z4 198 aa24.99■■□□□ 1.59
LINC01229-201ENST00000561510 CUX1P39880 1505 aa24.96■■□□□ 1.59
LINC01229-201ENST00000561510 POLA1P09884 1462 aaPredicted RBP24.95■■□□□ 1.58
LINC01229-201ENST00000561510 ZNF608Q9ULD9 1512 aaPredicted RBP24.93■■□□□ 1.58
LINC01229-201ENST00000561510 FGD5Q6ZNL6 1462 aa24.88■■□□□ 1.57
LINC01229-201ENST00000561510 SOGA1O94964 1423 aa24.87■■□□□ 1.57
LINC01229-201ENST00000561510 TARBP1Q13395 1621 aaKnown RBP24.87■■□□□ 1.57
LINC01229-201ENST00000561510 RAD54L2Q9Y4B4 1467 aa24.87■■□□□ 1.57
LINC01229-201ENST00000561510 WRNQ14191 1432 aaPredicted RBP eCLIP24.8■■□□□ 1.56
LINC01229-201ENST00000561510 AQRO60306 1485 aaKnown RBP eCLIP24.79■■□□□ 1.56
LINC01229-201ENST00000561510 EIF4G3O43432 1585 aaKnown RBP24.78■■□□□ 1.56
LINC01229-201ENST00000561510 TDRD9Q8NDG6 1382 aaKnown RBP24.76■■□□□ 1.55
LINC01229-201ENST00000561510 SYNJ1O43426 1573 aa24.72■■□□□ 1.55
LINC01229-201ENST00000561510 TOP2BQ02880 1626 aa24.71■■□□□ 1.55
LINC01229-201ENST00000561510 BIVM-ERCC5R4GMW8 1640 aa24.68■■□□□ 1.54
LINC01229-201ENST00000561510 OSCARQ8IYS5 282 aa24.64■■□□□ 1.54
LINC01229-201ENST00000561510 ABCA10Q8WWZ4 1543 aa24.64■■□□□ 1.53
LINC01229-201ENST00000561510 WDR97A6NE52 1622 aa24.63■■□□□ 1.53
LINC01229-201ENST00000561510 GRIN2BQ13224 1484 aa24.56■■□□□ 1.52
LINC01229-201ENST00000561510 GAPVD1Q14C86 1478 aa24.56■■□□□ 1.52
LINC01229-201ENST00000561510 SNAPC4Q5SXM2 1469 aa24.54■■□□□ 1.52
LINC01229-201ENST00000561510 FBLN2P98095 1184 aa24.53■■□□□ 1.52
LINC01229-201ENST00000561510 ABCA5Q8WWZ7 1642 aa24.51■■□□□ 1.51
LINC01229-201ENST00000561510 MAGI1Q96QZ7 1491 aaPredicted RBP24.49■■□□□ 1.51
LINC01229-201ENST00000561510 CHD1O14646 1710 aa24.45■■□□□ 1.5
LINC01229-201ENST00000561510 PBRM1Q86U86 1689 aa24.44■■□□□ 1.5
LINC01229-201ENST00000561510 CHMP7Q8WUX9 453 aaPredicted RBP24.44■■□□□ 1.5
LINC01229-201ENST00000561510 SYNJ2O15056 1496 aa24.4■■□□□ 1.5
LINC01229-201ENST00000561510 ERICH3Q5RHP9 1530 aa24.33■■□□□ 1.48
LINC01229-201ENST00000561510 ADAMTS12P58397 1594 aa24.28■■□□□ 1.48
LINC01229-201ENST00000561510 FHAD1B1AJZ9 1412 aa24.28■■□□□ 1.48
LINC01229-201ENST00000561510 KIF27Q86VH2 1401 aa24.28■■□□□ 1.48
LINC01229-201ENST00000561510 GRIN2AQ12879 1464 aa24.24■■□□□ 1.47
LINC01229-201ENST00000561510 CLASP1Q7Z460 1538 aa24.22■■□□□ 1.47
LINC01229-201ENST00000561510 IGF1RP08069 1367 aa24.22■■□□□ 1.47
LINC01229-201ENST00000561510 TRIM41Q8WV44 630 aa24.21■■□□□ 1.47
LINC01229-201ENST00000561510 ARHGEF11O15085 1522 aa24.21■■□□□ 1.47
LINC01229-201ENST00000561510 RIMBP3CA6NJZ7 1639 aa24.2■■□□□ 1.46
LINC01229-201ENST00000561510 RIMBP3BA6NNM3 1639 aa24.2■■□□□ 1.46
LINC01229-201ENST00000561510 RIMBP3Q9UFD9 1639 aa24.2■■□□□ 1.46
LINC01229-201ENST00000561510 NUP160Q12769 1436 aa24.14■■□□□ 1.45
LINC01229-201ENST00000561510 CEP170Q5SW79 1584 aa24.11■■□□□ 1.45
LINC01229-201ENST00000561510 RUSC2Q8N2Y8 1516 aa24.08■■□□□ 1.45
LINC01229-201ENST00000561510 CUL7Q14999 1698 aa24.06■■□□□ 1.44
LINC01229-201ENST00000561510 CARMIL1Q5VZK9 1371 aa24.05■■□□□ 1.44
LINC01229-201ENST00000561510 CYB5RLQ6IPT4 315 aa24.05■■□□□ 1.44
LINC01229-201ENST00000561510 ARAP1Q96P48 1450 aa24.02■■□□□ 1.44
LINC01229-201ENST00000561510 JPH4Q96JJ6 628 aa23.94■■□□□ 1.42
LINC01229-201ENST00000561510 SHROOM2Q13796 1616 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms