Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 FGD5P1-201ENST00000611158 3374 ntTSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 AL132656.4-201ENST00000623504 2122 ntBASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 HM13-204ENST00000398174 3792 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 POM121L1P-202ENST00000605258 1835 ntBASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 LINC02210-CRHR1-202ENST00000634540 2695 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 E2F8-205ENST00000620009 3519 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 AC131009.4-201ENST00000624048 1740 ntBASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 HHIPL2-201ENST00000343410 2575 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDC42SE1Q9NRR8 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 AL160286.1-201ENST00000427215 2471 ntBASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 MRVI1-215ENST00000541483 2468 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 FETUB-201ENST00000265029 1627 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 AC011511.5-201ENST00000589379 3219 ntBASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 RUNX1T1-202ENST00000360348 2370 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 AL607033.1-201ENST00000623900 1599 ntBASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 MYO9A-201ENST00000356056 12411 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 CLASP2-209ENST00000468888 6978 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 GANAB-216ENST00000540933 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 SCN5A-204ENST00000414099 8303 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 TDRD3-201ENST00000196169 3019 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 FAM214B-201ENST00000322813 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 DOCK10-201ENST00000258390 7260 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 TM9SF2-201ENST00000376387 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 ANKLE2-208ENST00000542282 3302 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 TAF1A-AS1-201ENST00000413074 1313 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 PRR19-202ENST00000499536 1956 ntAPPRIS P2 TSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 ESRRAP1-201ENST00000400596 1257 ntBASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 AC103564.2-201ENST00000432853 1299 ntBASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 AK2P2-201ENST00000439142 405 ntBASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 AC009947.2-201ENST00000444014 672 ntBASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 ACTN3-201ENST00000502692 3084 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 C1S-201ENST00000328916 2972 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 ZNF730-202ENST00000597761 2374 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 LINC01391-203ENST00000495287 3538 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 BTBD18-202ENST00000436147 2947 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 LRP2-202ENST00000443831 4007 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 F7-206ENST00000541084 2873 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 ITGB8-205ENST00000537992 3420 ntTSL 2 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 ASB15-202ENST00000434204 2817 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 PKNOX1-201ENST00000291547 5003 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 ABRA-201ENST00000311955 2755 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 SLC35F6-201ENST00000344420 3898 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 ANKMY1-201ENST00000272972 3228 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 HSPA4-201ENST00000304858 4825 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 SEMA4D-211ENST00000438547 4824 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 PISD-201ENST00000266095 2655 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 DCLK3-201ENST00000416516 5344 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CDC42SE1Q9NRR8 COPA-201ENST00000241704 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms