RNA–Protein interactions for RNA: ENST00000311955.3

ABRA-201, Transcript of actin binding Rho activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABRA, Length 2,755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABRA-201ENST00000311955 NISCHQ9Y2I1 1504 aa23.48■■□□□ 1.35
ABRA-201ENST00000311955 SHROOM4Q9ULL8 1493 aa20.57■□□□□ 0.88
ABRA-201ENST00000311955 SUPT5HO00267 1087 aaKnown RBP20.35■□□□□ 0.85
ABRA-201ENST00000311955 HRCP23327 699 aa19.98■□□□□ 0.79
ABRA-201ENST00000311955 MYO15BQ96JP2 1530 aa19.98■□□□□ 0.79
ABRA-201ENST00000311955 ZCCHC6Q5VYS8 1495 aaKnown RBP19.92■□□□□ 0.78
ABRA-201ENST00000311955 CHIC1Q5VXU3 224 aa19.9■□□□□ 0.78
ABRA-201ENST00000311955 PCGF6Q9BYE7 350 aa19.78■□□□□ 0.76
ABRA-201ENST00000311955 PPARGC1BQ86YN6 1023 aaKnown RBP19.66■□□□□ 0.74
ABRA-201ENST00000311955 CCDC180Q9P1Z9 1646 aa19.63■□□□□ 0.73
ABRA-201ENST00000311955 DCAF8L2P0C7V8 631 aa19.61■□□□□ 0.73
ABRA-201ENST00000311955 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
ABRA-201ENST00000311955 DCAF1Q9Y4B6 1507 aa19.38■□□□□ 0.69
ABRA-201ENST00000311955 TRIM26Q12899 539 aaPredicted RBP19.18■□□□□ 0.66
ABRA-201ENST00000311955 ABCC9O60706 1549 aa18.87■□□□□ 0.61
ABRA-201ENST00000311955 ZEB1P37275 1124 aaPredicted RBP18.86■□□□□ 0.61
ABRA-201ENST00000311955 FAM9AQ8IZU1 332 aaPredicted RBP18.83■□□□□ 0.6
ABRA-201ENST00000311955 TRIM41Q8WV44 630 aa18.83■□□□□ 0.6
ABRA-201ENST00000311955 RSF1Q96T23 1441 aaPredicted RBP18.8■□□□□ 0.6
ABRA-201ENST00000311955 EHMT2Q96KQ7 1210 aa18.76■□□□□ 0.59
ABRA-201ENST00000311955 SCAF1Q9H7N4 1312 aaKnown RBP18.73■□□□□ 0.59
ABRA-201ENST00000311955 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
ABRA-201ENST00000311955 SCRIBQ14160 1630 aa18.68■□□□□ 0.58
ABRA-201ENST00000311955 PELP1Q8IZL8 1130 aaKnown RBP18.63■□□□□ 0.57
ABRA-201ENST00000311955 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.46■□□□□ 0.55
ABRA-201ENST00000311955 CECR2Q9BXF3 1484 aa18.41■□□□□ 0.54
ABRA-201ENST00000311955 CCER1Q8TC90 406 aaPredicted RBP18.37■□□□□ 0.53
ABRA-201ENST00000311955 NEUROD1Q13562 356 aa18.36■□□□□ 0.53
ABRA-201ENST00000311955 MROH2BQ7Z745 1585 aa18.35■□□□□ 0.53
ABRA-201ENST00000311955 ACIN1Q9UKV3 1341 aaKnown RBP18.35■□□□□ 0.53
ABRA-201ENST00000311955 WIZO95785 1651 aa18.27■□□□□ 0.52
ABRA-201ENST00000311955 TTBK1Q5TCY1 1321 aaPredicted RBP18.24■□□□□ 0.51
ABRA-201ENST00000311955 DIEXFQ68CQ4 756 aaKnown RBP18.23■□□□□ 0.51
ABRA-201ENST00000311955 GTF3C3Q9Y5Q9 886 aa18.2■□□□□ 0.5
ABRA-201ENST00000311955 EIF4G1Q04637 1599 aaKnown RBP18.12■□□□□ 0.49
ABRA-201ENST00000311955 CENPBP07199 599 aaPredicted RBP18.11■□□□□ 0.49
ABRA-201ENST00000311955 NACADO15069 1562 aa18.1■□□□□ 0.49
ABRA-201ENST00000311955 BAZ1AQ9NRL2 1556 aaPredicted RBP18.09■□□□□ 0.49
ABRA-201ENST00000311955 ABCC8Q09428 1581 aa18.06■□□□□ 0.48
ABRA-201ENST00000311955 CCDC88BA6NC98 1476 aa18.06■□□□□ 0.48
ABRA-201ENST00000311955 WRNQ14191 1432 aaPredicted RBP eCLIP18.05■□□□□ 0.48
ABRA-201ENST00000311955 CEP162Q5TB80 1403 aa18.04■□□□□ 0.48
ABRA-201ENST00000311955 SOGA1O94964 1423 aa17.99■□□□□ 0.47
ABRA-201ENST00000311955 ZNF316A6NFI3 1004 aaPredicted RBP17.96■□□□□ 0.46
ABRA-201ENST00000311955 TNIKQ9UKE5 1360 aa17.93■□□□□ 0.46
ABRA-201ENST00000311955 YTHDC1Q96MU7 727 aaKnown RBP17.93■□□□□ 0.46
ABRA-201ENST00000311955 UBTFP17480 764 aaKnown RBP17.91■□□□□ 0.46
ABRA-201ENST00000311955 RUSC2Q8N2Y8 1516 aa17.9■□□□□ 0.46
ABRA-201ENST00000311955 TOP2AP11388 1531 aaKnown RBP17.89■□□□□ 0.45
ABRA-201ENST00000311955 CSRNP3Q8WYN3 585 aa17.88■□□□□ 0.45
ABRA-201ENST00000311955 SMARCA2P51531 1590 aa17.85■□□□□ 0.45
ABRA-201ENST00000311955 MIER1Q8N108 512 aa17.83■□□□□ 0.45
ABRA-201ENST00000311955 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
ABRA-201ENST00000311955 SMARCA4P51532 1647 aa17.79■□□□□ 0.44
ABRA-201ENST00000311955 EEA1Q15075 1411 aa17.76■□□□□ 0.43
ABRA-201ENST00000311955 GOLGA3Q08378 1498 aa17.75■□□□□ 0.43
ABRA-201ENST00000311955 MYT1Q01538 1121 aa17.74■□□□□ 0.43
ABRA-201ENST00000311955 CLIP1P30622 1438 aa17.61■□□□□ 0.41
ABRA-201ENST00000311955 CEP164Q9UPV0 1460 aa17.59■□□□□ 0.41
ABRA-201ENST00000311955 RANGAP1P46060 587 aaPredicted RBP17.58■□□□□ 0.4
ABRA-201ENST00000311955 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
ABRA-201ENST00000311955 VPS8Q8N3P4 1428 aa17.55■□□□□ 0.4
ABRA-201ENST00000311955 SYNJ1O43426 1573 aa17.55■□□□□ 0.4
ABRA-201ENST00000311955 KIF21BO75037 1637 aa17.53■□□□□ 0.4
ABRA-201ENST00000311955 APLP2Q06481 763 aa17.53■□□□□ 0.4
ABRA-201ENST00000311955 RAPGEF2Q9Y4G8 1499 aa17.49■□□□□ 0.39
ABRA-201ENST00000311955 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
ABRA-201ENST00000311955 DHX57Q6P158 1386 aaKnown RBP17.42■□□□□ 0.38
ABRA-201ENST00000311955 BAZ1BQ9UIG0 1483 aaKnown RBP17.42■□□□□ 0.38
ABRA-201ENST00000311955 SUPT16HQ9Y5B9 1047 aaKnown RBP17.4■□□□□ 0.38
ABRA-201ENST00000311955 KANK4Q5T7N3 995 aaPredicted RBP17.35■□□□□ 0.37
ABRA-201ENST00000311955 PEG3Q9GZU2 1588 aa17.35■□□□□ 0.37
ABRA-201ENST00000311955 CLSPNQ9HAW4 1339 aa17.34■□□□□ 0.37
ABRA-201ENST00000311955 BICRAQ9NZM4 1560 aa17.33■□□□□ 0.37
ABRA-201ENST00000311955 ARAP1Q96P48 1450 aa17.28■□□□□ 0.36
ABRA-201ENST00000311955 ATAD2BQ9ULI0 1458 aa17.26■□□□□ 0.35
ABRA-201ENST00000311955 KCNH8Q96L42 1107 aa17.24■□□□□ 0.35
ABRA-201ENST00000311955 TSHZ2Q9NRE2 1034 aa17.24■□□□□ 0.35
ABRA-201ENST00000311955 TOP2BQ02880 1626 aa17.22■□□□□ 0.35
ABRA-201ENST00000311955 ITGAEP38570 1179 aa17.21■□□□□ 0.35
ABRA-201ENST00000311955 PRXQ9BXM0 1461 aa17.2■□□□□ 0.34
ABRA-201ENST00000311955 RRBP1Q9P2E9 1410 aaKnown RBP17.19■□□□□ 0.34
ABRA-201ENST00000311955 ERICH3Q5RHP9 1530 aa17.17■□□□□ 0.34
ABRA-201ENST00000311955 CCNB3Q8WWL7 1395 aa17.14■□□□□ 0.33
ABRA-201ENST00000311955 CUX2O14529 1486 aa17.13■□□□□ 0.33
ABRA-201ENST00000311955 BIVM-ERCC5R4GMW8 1640 aa17.12■□□□□ 0.33
ABRA-201ENST00000311955 BCANQ96GW7 911 aa17.11■□□□□ 0.33
ABRA-201ENST00000311955 RAB3GAP2Q9H2M9 1393 aa17.08■□□□□ 0.32
ABRA-201ENST00000311955 ANP32EQ9BTT0 268 aa17.07■□□□□ 0.32
ABRA-201ENST00000311955 ARHGAP35Q9NRY4 1499 aa17.06■□□□□ 0.32
ABRA-201ENST00000311955 MAPKBP1O60336 1514 aa17.06■□□□□ 0.32
ABRA-201ENST00000311955 DDX10Q13206 875 aaKnown RBP17.04■□□□□ 0.32
ABRA-201ENST00000311955 CUX1P39880 1505 aa17.03■□□□□ 0.32
ABRA-201ENST00000311955 FKBP8Q14318 412 aa17.03■□□□□ 0.32
ABRA-201ENST00000311955 KIF27Q86VH2 1401 aa17.02■□□□□ 0.32
ABRA-201ENST00000311955 SIN3AQ96ST3 1273 aa17.01■□□□□ 0.31
ABRA-201ENST00000311955 WDR97A6NE52 1622 aa16.98■□□□□ 0.31
ABRA-201ENST00000311955 HIRIP3Q9BW71 556 aaPredicted RBP16.96■□□□□ 0.31
ABRA-201ENST00000311955 SETD5Q9C0A6 1442 aa16.95■□□□□ 0.3
ABRA-201ENST00000311955 PPP1R15AO75807 674 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms