RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 DCAF8L2P0C7V8 631 aa18.11■□□□□ 0.49
SCN5A-204ENST00000414099 PELP1Q8IZL8 1130 aaKnown RBP17.31■□□□□ 0.36
SCN5A-204ENST00000414099 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
SCN5A-204ENST00000414099 FAM9AQ8IZU1 332 aaPredicted RBP16.98■□□□□ 0.31
SCN5A-204ENST00000414099 SUPT5HO00267 1087 aaKnown RBP16.86■□□□□ 0.29
SCN5A-204ENST00000414099 APLP2Q06481 763 aa16.72■□□□□ 0.27
SCN5A-204ENST00000414099 SHROOM4Q9ULL8 1493 aa16.52■□□□□ 0.23
SCN5A-204ENST00000414099 CCER1Q8TC90 406 aaPredicted RBP16.5■□□□□ 0.23
SCN5A-204ENST00000414099 ERICH6Q7L0X2 663 aa16.4■□□□□ 0.22
SCN5A-204ENST00000414099 EHMT2Q96KQ7 1210 aa16.26■□□□□ 0.19
SCN5A-204ENST00000414099 MYT1Q01538 1121 aa16.2■□□□□ 0.18
SCN5A-204ENST00000414099 CENPBP07199 599 aaPredicted RBP16.17■□□□□ 0.18
SCN5A-204ENST00000414099 ZEB1P37275 1124 aaPredicted RBP16.08■□□□□ 0.17
SCN5A-204ENST00000414099 ATP1B4Q9UN42 357 aaPredicted RBP15.94■□□□□ 0.14
SCN5A-204ENST00000414099 NEFLP07196 543 aa15.94■□□□□ 0.14
SCN5A-204ENST00000414099 TRIM41Q8WV44 630 aa15.84■□□□□ 0.13
SCN5A-204ENST00000414099 YTHDC1Q96MU7 727 aaKnown RBP15.8■□□□□ 0.12
SCN5A-204ENST00000414099 UBTFP17480 764 aaKnown RBP15.78■□□□□ 0.12
SCN5A-204ENST00000414099 RANGAP1P46060 587 aaPredicted RBP15.76■□□□□ 0.11
SCN5A-204ENST00000414099 TTBK1Q5TCY1 1321 aaPredicted RBP15.75■□□□□ 0.11
SCN5A-204ENST00000414099 PCGF6Q9BYE7 350 aa15.72■□□□□ 0.11
SCN5A-204ENST00000414099 DAXXQ9UER7 740 aaPredicted RBP15.69■□□□□ 0.1
SCN5A-204ENST00000414099 MYT1LQ9UL68 1186 aa15.61■□□□□ 0.09
SCN5A-204ENST00000414099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.46■□□□□ 0.07
SCN5A-204ENST00000414099 HNRNPUL2Q1KMD3 747 aaKnown RBP15.46■□□□□ 0.07
SCN5A-204ENST00000414099 ZNF316A6NFI3 1004 aaPredicted RBP15.25■□□□□ 0.03
SCN5A-204ENST00000414099 RTL5Q5HYW3 569 aaPredicted RBP15.22■□□□□ 0.03
SCN5A-204ENST00000414099 POLR3GLQ9BT43 218 aa15.19■□□□□ 0.02
SCN5A-204ENST00000414099 SLC4A1APQ9BWU0 796 aaKnown RBP15.17■□□□□ 0.02
SCN5A-204ENST00000414099 TRIM26Q12899 539 aaPredicted RBP15.17■□□□□ 0.02
SCN5A-204ENST00000414099 ITGAEP38570 1179 aa15.12■□□□□ 0.01
SCN5A-204ENST00000414099 CHIC1Q5VXU3 224 aa15.09■□□□□ 0.01
SCN5A-204ENST00000414099 CLSPNQ9HAW4 1339 aa15.08■□□□□ 0
SCN5A-204ENST00000414099 ZBTB47Q9UFB7 747 aaPredicted RBP14.98□□□□□ -0.01
SCN5A-204ENST00000414099 PPARGC1BQ86YN6 1023 aaKnown RBP14.94□□□□□ -0.02
SCN5A-204ENST00000414099 ABCC9O60706 1549 aa14.92□□□□□ -0.02
SCN5A-204ENST00000414099 FAM50AQ14320 339 aaKnown RBP14.89□□□□□ -0.03
SCN5A-204ENST00000414099 HRCP23327 699 aa14.89□□□□□ -0.03
SCN5A-204ENST00000414099 NEFMP07197 916 aa14.87□□□□□ -0.03
SCN5A-204ENST00000414099 TRIM52Q96A61 297 aa14.87□□□□□ -0.03
SCN5A-204ENST00000414099 CNGB1Q14028 1251 aaPredicted RBP14.79□□□□□ -0.04
SCN5A-204ENST00000414099 FBLN2P98095 1184 aa14.78□□□□□ -0.04
SCN5A-204ENST00000414099 BCANQ96GW7 911 aa14.78□□□□□ -0.04
SCN5A-204ENST00000414099 ESF1Q9H501 851 aaKnown RBP14.76□□□□□ -0.05
SCN5A-204ENST00000414099 CDK11AQ9UQ88 783 aaPredicted RBP14.76□□□□□ -0.05
SCN5A-204ENST00000414099 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
SCN5A-204ENST00000414099 DIEXFQ68CQ4 756 aaKnown RBP14.7□□□□□ -0.06
SCN5A-204ENST00000414099 SLC24A1O60721 1099 aa14.7□□□□□ -0.06
SCN5A-204ENST00000414099 ANP32CO43423 234 aa14.68□□□□□ -0.06
SCN5A-204ENST00000414099 CANXP27824 592 aaKnown RBP14.67□□□□□ -0.06
SCN5A-204ENST00000414099 ANP32BQ92688 251 aaKnown RBP14.67□□□□□ -0.06
SCN5A-204ENST00000414099 NPM1P06748 294 aaKnown RBP eCLIP14.62□□□□□ -0.07
SCN5A-204ENST00000414099 LOC105371045A0A1W2PR82 267 aa14.61□□□□□ -0.07
SCN5A-204ENST00000414099 NEUROD1Q13562 356 aa14.6□□□□□ -0.07
SCN5A-204ENST00000414099 CCDC180Q9P1Z9 1646 aa14.6□□□□□ -0.07
SCN5A-204ENST00000414099 ANP32AP39687 249 aaKnown RBP14.6□□□□□ -0.07
SCN5A-204ENST00000414099 ZNF326Q5BKZ1 582 aaKnown RBP14.59□□□□□ -0.07
SCN5A-204ENST00000414099 STAG3Q9UJ98 1225 aa14.55□□□□□ -0.08
SCN5A-204ENST00000414099 GLIPR1L2Q4G1C9 344 aa14.55□□□□□ -0.08
SCN5A-204ENST00000414099 SCRIBQ14160 1630 aa14.48□□□□□ -0.09
SCN5A-204ENST00000414099 UPF2Q9HAU5 1272 aaKnown RBP14.47□□□□□ -0.09
SCN5A-204ENST00000414099 ZNF777Q9ULD5 760 aaPredicted RBP14.42□□□□□ -0.1
SCN5A-204ENST00000414099 HSP90AA1P07900 732 aaKnown RBP14.42□□□□□ -0.1
SCN5A-204ENST00000414099 ACIN1Q9UKV3 1341 aaKnown RBP14.36□□□□□ -0.11
SCN5A-204ENST00000414099 RB1CC1Q8TDY2 1594 aa14.35□□□□□ -0.11
SCN5A-204ENST00000414099 CDK11BP21127 795 aaKnown RBP14.34□□□□□ -0.11
SCN5A-204ENST00000414099 CHGAP10645 457 aaKnown RBP14.33□□□□□ -0.12
SCN5A-204ENST00000414099 GTF3C3Q9Y5Q9 886 aa14.32□□□□□ -0.12
SCN5A-204ENST00000414099 CSRNP3Q8WYN3 585 aa14.32□□□□□ -0.12
SCN5A-204ENST00000414099 P3H3Q8IVL6 736 aa14.32□□□□□ -0.12
SCN5A-204ENST00000414099 TONSLQ96HA7 1378 aa14.31□□□□□ -0.12
SCN5A-204ENST00000414099 BCL11AQ9H165 835 aa14.3□□□□□ -0.12
SCN5A-204ENST00000414099 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.28□□□□□ -0.12
SCN5A-204ENST00000414099 ARID3CA6NKF2 412 aa14.27□□□□□ -0.13
SCN5A-204ENST00000414099 NPM2Q86SE8 214 aaKnown RBP14.27□□□□□ -0.13
SCN5A-204ENST00000414099 TSPY4P0CV99 314 aa14.23□□□□□ -0.13
SCN5A-204ENST00000414099 TSPY10P0CW01 314 aa14.23□□□□□ -0.13
SCN5A-204ENST00000414099 PLPPR3Q6T4P5 718 aa14.22□□□□□ -0.13
SCN5A-204ENST00000414099 EIF5BO60841 1220 aaKnown RBP14.22□□□□□ -0.13
SCN5A-204ENST00000414099 CHMP7Q8WUX9 453 aaPredicted RBP14.21□□□□□ -0.13
SCN5A-204ENST00000414099 ANP32EQ9BTT0 268 aa14.19□□□□□ -0.14
SCN5A-204ENST00000414099 MYH16Q9H6N6 1097 aa14.17□□□□□ -0.14
SCN5A-204ENST00000414099 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
SCN5A-204ENST00000414099 WDR43Q15061 677 aaKnown RBP eCLIP14.16□□□□□ -0.14
SCN5A-204ENST00000414099 MTUS2Q5JR59 1369 aa14.14□□□□□ -0.15
SCN5A-204ENST00000414099 RSF1Q96T23 1441 aaPredicted RBP14.13□□□□□ -0.15
SCN5A-204ENST00000414099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.13□□□□□ -0.15
SCN5A-204ENST00000414099 NACADO15069 1562 aa14.12□□□□□ -0.15
SCN5A-204ENST00000414099 NCLP19338 710 aaKnown RBP14.11□□□□□ -0.15
SCN5A-204ENST00000414099 PPP1R15AO75807 674 aaPredicted RBP14.11□□□□□ -0.15
SCN5A-204ENST00000414099 TMC1Q8TDI8 760 aa14.11□□□□□ -0.15
SCN5A-204ENST00000414099 ZCCHC6Q5VYS8 1495 aaKnown RBP14.1□□□□□ -0.15
SCN5A-204ENST00000414099 TNNT2P45379 298 aaPredicted RBP14.1□□□□□ -0.15
SCN5A-204ENST00000414099 C14orf37Q86TY3 774 aa14.09□□□□□ -0.15
SCN5A-204ENST00000414099 DDRGK1Q96HY6 314 aa14.09□□□□□ -0.15
SCN5A-204ENST00000414099 BECN1Q14457 450 aa14.07□□□□□ -0.16
SCN5A-204ENST00000414099 A0A0G2JS52 829 aa14.05□□□□□ -0.16
SCN5A-204ENST00000414099 HAP1P54257 671 aaPredicted RBP14.05□□□□□ -0.16
SCN5A-204ENST00000414099 GOLGA6L22H0YM25 854 aa14.05□□□□□ -0.16
SCN5A-204ENST00000414099 CDCA8Q53HL2 280 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms