RNA–Protein interactions for RNA: ENST00000581549.1

LINC00511-213, long intergenic non-protein coding RNA 511, humanhuman

TSL 2 BASIC

Gene LINC00511, Length 2,265 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-213ENST00000581549 NISCHQ9Y2I1 1504 aa31.11■■■□□ 2.57
LINC00511-213ENST00000581549 CCDC180Q9P1Z9 1646 aa26.95■■□□□ 1.9
LINC00511-213ENST00000581549 ZCCHC6Q5VYS8 1495 aaKnown RBP26.21■■□□□ 1.79
LINC00511-213ENST00000581549 DCAF1Q9Y4B6 1507 aa25.7■■□□□ 1.7
LINC00511-213ENST00000581549 SHROOM4Q9ULL8 1493 aa25.66■■□□□ 1.7
LINC00511-213ENST00000581549 DCAF8L2P0C7V8 631 aa25.56■■□□□ 1.68
LINC00511-213ENST00000581549 MYO15BQ96JP2 1530 aa25.25■■□□□ 1.63
LINC00511-213ENST00000581549 ABCC9O60706 1549 aa25.2■■□□□ 1.62
LINC00511-213ENST00000581549 NACADO15069 1562 aa25■■□□□ 1.59
LINC00511-213ENST00000581549 SCRIBQ14160 1630 aa24.87■■□□□ 1.57
LINC00511-213ENST00000581549 SUPT5HO00267 1087 aaKnown RBP24.83■■□□□ 1.57
LINC00511-213ENST00000581549 RB1CC1Q8TDY2 1594 aa24.7■■□□□ 1.55
LINC00511-213ENST00000581549 UNC13AQ9UPW8 1703 aa24.32■■□□□ 1.48
LINC00511-213ENST00000581549 RSF1Q96T23 1441 aaPredicted RBP24.29■■□□□ 1.48
LINC00511-213ENST00000581549 CECR2Q9BXF3 1484 aa24.19■■□□□ 1.46
LINC00511-213ENST00000581549 MROH2BQ7Z745 1585 aa24.08■■□□□ 1.45
LINC00511-213ENST00000581549 BICRAQ9NZM4 1560 aa24.03■■□□□ 1.44
LINC00511-213ENST00000581549 CHIC1Q5VXU3 224 aa23.97■■□□□ 1.43
LINC00511-213ENST00000581549 BAZ1AQ9NRL2 1556 aaPredicted RBP23.97■■□□□ 1.43
LINC00511-213ENST00000581549 WIZO95785 1651 aa23.92■■□□□ 1.42
LINC00511-213ENST00000581549 PABPN1Q86U42 306 aaKnown RBP eCLIP23.85■■□□□ 1.41
LINC00511-213ENST00000581549 SMARCA4P51532 1647 aa23.85■■□□□ 1.41
LINC00511-213ENST00000581549 TOP2AP11388 1531 aaKnown RBP23.63■■□□□ 1.37
LINC00511-213ENST00000581549 PEG3Q9GZU2 1588 aa23.53■■□□□ 1.36
LINC00511-213ENST00000581549 SMARCA2P51531 1590 aa23.45■■□□□ 1.34
LINC00511-213ENST00000581549 EIF4G1Q04637 1599 aaKnown RBP23.43■■□□□ 1.34
LINC00511-213ENST00000581549 CCDC88BA6NC98 1476 aa23.42■■□□□ 1.34
LINC00511-213ENST00000581549 ATAD2BQ9ULI0 1458 aa23.36■■□□□ 1.33
LINC00511-213ENST00000581549 TRIM41Q8WV44 630 aa23.29■■□□□ 1.32
LINC00511-213ENST00000581549 BAZ1BQ9UIG0 1483 aaKnown RBP23.23■■□□□ 1.31
LINC00511-213ENST00000581549 LOC105371045A0A1W2PR82 267 aa23.1■■□□□ 1.29
LINC00511-213ENST00000581549 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
LINC00511-213ENST00000581549 HMGXB3Q12766 1538 aa23.08■■□□□ 1.29
LINC00511-213ENST00000581549 ABCC8Q09428 1581 aa23.06■■□□□ 1.28
LINC00511-213ENST00000581549 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
LINC00511-213ENST00000581549 CC2D2AQ9P2K1 1620 aa22.82■■□□□ 1.24
LINC00511-213ENST00000581549 WRNQ14191 1432 aaPredicted RBP eCLIP22.82■■□□□ 1.24
LINC00511-213ENST00000581549 SYNJ1O43426 1573 aa22.76■■□□□ 1.23
LINC00511-213ENST00000581549 SOGA1O94964 1423 aa22.69■■□□□ 1.22
LINC00511-213ENST00000581549 CFTRP13569 1480 aa22.68■■□□□ 1.22
LINC00511-213ENST00000581549 EEA1Q15075 1411 aa22.64■■□□□ 1.21
LINC00511-213ENST00000581549 RUSC2Q8N2Y8 1516 aa22.61■■□□□ 1.21
LINC00511-213ENST00000581549 TOP2BQ02880 1626 aa22.61■■□□□ 1.21
LINC00511-213ENST00000581549 PRDM2Q13029 1718 aa22.61■■□□□ 1.21
LINC00511-213ENST00000581549 EHMT2Q96KQ7 1210 aa22.6■■□□□ 1.21
LINC00511-213ENST00000581549 BIVM-ERCC5R4GMW8 1640 aa22.59■■□□□ 1.21
LINC00511-213ENST00000581549 CADPSQ9ULU8 1353 aa22.52■■□□□ 1.2
LINC00511-213ENST00000581549 CSRNP3Q8WYN3 585 aa22.51■■□□□ 1.19
LINC00511-213ENST00000581549 CUX1P39880 1505 aa22.49■■□□□ 1.19
LINC00511-213ENST00000581549 KIF21BO75037 1637 aa22.38■■□□□ 1.17
LINC00511-213ENST00000581549 TNIKQ9UKE5 1360 aa22.38■■□□□ 1.17
LINC00511-213ENST00000581549 GOLGA3Q08378 1498 aa22.37■■□□□ 1.17
LINC00511-213ENST00000581549 PCGF6Q9BYE7 350 aa22.36■■□□□ 1.17
LINC00511-213ENST00000581549 CEP164Q9UPV0 1460 aa22.33■■□□□ 1.17
LINC00511-213ENST00000581549 CEP162Q5TB80 1403 aa22.29■■□□□ 1.16
LINC00511-213ENST00000581549 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
LINC00511-213ENST00000581549 NESP48681 1621 aa22.27■■□□□ 1.16
LINC00511-213ENST00000581549 TRIM26Q12899 539 aaPredicted RBP22.26■■□□□ 1.15
LINC00511-213ENST00000581549 UBTFP17480 764 aaKnown RBP22.24■■□□□ 1.15
LINC00511-213ENST00000581549 LAMC3Q9Y6N6 1575 aa22.24■■□□□ 1.15
LINC00511-213ENST00000581549 DNAJC5BQ9UF47 199 aa22.2■■□□□ 1.15
LINC00511-213ENST00000581549 RAPGEF2Q9Y4G8 1499 aa22.2■■□□□ 1.14
LINC00511-213ENST00000581549 KIF27Q86VH2 1401 aa22.19■■□□□ 1.14
LINC00511-213ENST00000581549 FGD5Q6ZNL6 1462 aa22.17■■□□□ 1.14
LINC00511-213ENST00000581549 PRXQ9BXM0 1461 aa22.17■■□□□ 1.14
LINC00511-213ENST00000581549 ERICH3Q5RHP9 1530 aa22.15■■□□□ 1.14
LINC00511-213ENST00000581549 DNMBPQ6XZF7 1577 aa22.14■■□□□ 1.14
LINC00511-213ENST00000581549 TOPBP1Q92547 1522 aa22.09■■□□□ 1.13
LINC00511-213ENST00000581549 CUX2O14529 1486 aa22.08■■□□□ 1.13
LINC00511-213ENST00000581549 CLIP1P30622 1438 aa22.03■■□□□ 1.12
LINC00511-213ENST00000581549 PDS5BQ9NTI5 1447 aa22.03■■□□□ 1.12
LINC00511-213ENST00000581549 URB2Q14146 1524 aaKnown RBP22.02■■□□□ 1.12
LINC00511-213ENST00000581549 POLA1P09884 1462 aaPredicted RBP22.01■■□□□ 1.11
LINC00511-213ENST00000581549 HRCP23327 699 aa22.01■■□□□ 1.11
LINC00511-213ENST00000581549 KIF21AQ7Z4S6 1674 aa22■■□□□ 1.11
LINC00511-213ENST00000581549 IGF1RP08069 1367 aa22■■□□□ 1.11
LINC00511-213ENST00000581549 PPARGC1BQ86YN6 1023 aaKnown RBP21.97■■□□□ 1.11
LINC00511-213ENST00000581549 ABCA10Q8WWZ4 1543 aa21.97■■□□□ 1.11
LINC00511-213ENST00000581549 RAD54L2Q9Y4B4 1467 aa21.97■■□□□ 1.11
LINC00511-213ENST00000581549 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
LINC00511-213ENST00000581549 VPS8Q8N3P4 1428 aa21.89■■□□□ 1.09
LINC00511-213ENST00000581549 CARMIL1Q5VZK9 1371 aa21.88■■□□□ 1.09
LINC00511-213ENST00000581549 ARAP1Q96P48 1450 aa21.81■■□□□ 1.08
LINC00511-213ENST00000581549 RANGAP1P46060 587 aaPredicted RBP21.81■■□□□ 1.08
LINC00511-213ENST00000581549 ABCA5Q8WWZ7 1642 aa21.78■■□□□ 1.08
LINC00511-213ENST00000581549 CUL7Q14999 1698 aa21.77■■□□□ 1.08
LINC00511-213ENST00000581549 MRC2Q9UBG0 1479 aa21.76■■□□□ 1.07
LINC00511-213ENST00000581549 TARBP1Q13395 1621 aaKnown RBP21.75■■□□□ 1.07
LINC00511-213ENST00000581549 ARHGAP35Q9NRY4 1499 aa21.73■■□□□ 1.07
LINC00511-213ENST00000581549 TTBK1Q5TCY1 1321 aaPredicted RBP21.71■■□□□ 1.07
LINC00511-213ENST00000581549 TDRD9Q8NDG6 1382 aaKnown RBP21.7■■□□□ 1.06
LINC00511-213ENST00000581549 GAPVD1Q14C86 1478 aa21.69■■□□□ 1.06
LINC00511-213ENST00000581549 WDR62O43379 1518 aa21.65■■□□□ 1.06
LINC00511-213ENST00000581549 CTTNBP2Q8WZ74 1663 aa21.61■■□□□ 1.05
LINC00511-213ENST00000581549 APLP2Q06481 763 aa21.61■■□□□ 1.05
LINC00511-213ENST00000581549 PBRM1Q86U86 1689 aa21.58■■□□□ 1.05
LINC00511-213ENST00000581549 IFT140Q96RY7 1462 aa21.54■■□□□ 1.04
LINC00511-213ENST00000581549 THOC2Q8NI27 1593 aaKnown RBP21.53■■□□□ 1.04
LINC00511-213ENST00000581549 ERCC6Q03468 1493 aa21.52■■□□□ 1.04
LINC00511-213ENST00000581549 AQRO60306 1485 aaKnown RBP eCLIP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms