RNA–Protein interactions for RNA: ENST00000541483.5

MRVI1-215, Transcript of murine retrovirus integration site 1 homolog, humanhuman

TSL 2 BASIC

Gene MRVI1, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRVI1-215ENST00000541483 NISCHQ9Y2I1 1504 aa27.44■■□□□ 1.98
MRVI1-215ENST00000541483 CCDC180Q9P1Z9 1646 aa23.62■■□□□ 1.37
MRVI1-215ENST00000541483 ZCCHC6Q5VYS8 1495 aaKnown RBP23.08■■□□□ 1.29
MRVI1-215ENST00000541483 DCAF8L2P0C7V8 631 aa23.01■■□□□ 1.27
MRVI1-215ENST00000541483 SHROOM4Q9ULL8 1493 aa22.99■■□□□ 1.27
MRVI1-215ENST00000541483 ABCC9O60706 1549 aa22.51■■□□□ 1.19
MRVI1-215ENST00000541483 DCAF1Q9Y4B6 1507 aa22.47■■□□□ 1.19
MRVI1-215ENST00000541483 SUPT5HO00267 1087 aaKnown RBP22.21■■□□□ 1.15
MRVI1-215ENST00000541483 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
MRVI1-215ENST00000541483 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
MRVI1-215ENST00000541483 NACADO15069 1562 aa21.99■■□□□ 1.11
MRVI1-215ENST00000541483 RB1CC1Q8TDY2 1594 aa21.79■■□□□ 1.08
MRVI1-215ENST00000541483 CECR2Q9BXF3 1484 aa21.48■■□□□ 1.03
MRVI1-215ENST00000541483 UNC13AQ9UPW8 1703 aa21.47■■□□□ 1.03
MRVI1-215ENST00000541483 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
MRVI1-215ENST00000541483 PABPN1Q86U42 306 aaKnown RBP eCLIP21.4■■□□□ 1.02
MRVI1-215ENST00000541483 MROH2BQ7Z745 1585 aa21.32■■□□□ 1
MRVI1-215ENST00000541483 BICRAQ9NZM4 1560 aa21.23■□□□□ 0.99
MRVI1-215ENST00000541483 CHIC1Q5VXU3 224 aa21.22■□□□□ 0.99
MRVI1-215ENST00000541483 WIZO95785 1651 aa21.18■□□□□ 0.98
MRVI1-215ENST00000541483 BAZ1AQ9NRL2 1556 aaPredicted RBP21.12■□□□□ 0.97
MRVI1-215ENST00000541483 SMARCA4P51532 1647 aa21.04■□□□□ 0.96
MRVI1-215ENST00000541483 TOP2AP11388 1531 aaKnown RBP20.81■□□□□ 0.92
MRVI1-215ENST00000541483 CCDC88BA6NC98 1476 aa20.72■□□□□ 0.91
MRVI1-215ENST00000541483 TRIM41Q8WV44 630 aa20.7■□□□□ 0.9
MRVI1-215ENST00000541483 SMARCA2P51531 1590 aa20.69■□□□□ 0.9
MRVI1-215ENST00000541483 ATAD2BQ9ULI0 1458 aa20.66■□□□□ 0.9
MRVI1-215ENST00000541483 PEG3Q9GZU2 1588 aa20.64■□□□□ 0.89
MRVI1-215ENST00000541483 LOC105371045A0A1W2PR82 267 aa20.62■□□□□ 0.89
MRVI1-215ENST00000541483 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.88
MRVI1-215ENST00000541483 EIF4G1Q04637 1599 aaKnown RBP20.58■□□□□ 0.88
MRVI1-215ENST00000541483 FAM9AQ8IZU1 332 aaPredicted RBP20.56■□□□□ 0.88
MRVI1-215ENST00000541483 ABCC8Q09428 1581 aa20.49■□□□□ 0.87
MRVI1-215ENST00000541483 EHMT2Q96KQ7 1210 aa20.46■□□□□ 0.87
MRVI1-215ENST00000541483 NCAPD3P42695 1498 aa20.35■□□□□ 0.85
MRVI1-215ENST00000541483 HMGXB3Q12766 1538 aa20.3■□□□□ 0.84
MRVI1-215ENST00000541483 CC2D2AQ9P2K1 1620 aa20.25■□□□□ 0.83
MRVI1-215ENST00000541483 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
MRVI1-215ENST00000541483 SOGA1O94964 1423 aa20.15■□□□□ 0.82
MRVI1-215ENST00000541483 SYNJ1O43426 1573 aa20.13■□□□□ 0.81
MRVI1-215ENST00000541483 RUSC2Q8N2Y8 1516 aa20.1■□□□□ 0.81
MRVI1-215ENST00000541483 CFTRP13569 1480 aa20.02■□□□□ 0.79
MRVI1-215ENST00000541483 DNAJC5BQ9UF47 199 aa19.98■□□□□ 0.79
MRVI1-215ENST00000541483 CSRNP3Q8WYN3 585 aa19.94■□□□□ 0.78
MRVI1-215ENST00000541483 PCGF6Q9BYE7 350 aa19.93■□□□□ 0.78
MRVI1-215ENST00000541483 CADPSQ9ULU8 1353 aa19.92■□□□□ 0.78
MRVI1-215ENST00000541483 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
MRVI1-215ENST00000541483 CUX1P39880 1505 aa19.89■□□□□ 0.77
MRVI1-215ENST00000541483 NESP48681 1621 aa19.86■□□□□ 0.77
MRVI1-215ENST00000541483 EEA1Q15075 1411 aa19.85■□□□□ 0.77
MRVI1-215ENST00000541483 BIVM-ERCC5R4GMW8 1640 aa19.84■□□□□ 0.77
MRVI1-215ENST00000541483 UBTFP17480 764 aaKnown RBP19.83■□□□□ 0.77
MRVI1-215ENST00000541483 PRDM2Q13029 1718 aa19.8■□□□□ 0.76
MRVI1-215ENST00000541483 PPARGC1BQ86YN6 1023 aaKnown RBP19.78■□□□□ 0.76
MRVI1-215ENST00000541483 FANCD2Q9BXW9 1451 aa19.75■□□□□ 0.75
MRVI1-215ENST00000541483 GOLGA3Q08378 1498 aa19.73■□□□□ 0.75
MRVI1-215ENST00000541483 CEP162Q5TB80 1403 aa19.72■□□□□ 0.75
MRVI1-215ENST00000541483 TNIKQ9UKE5 1360 aa19.7■□□□□ 0.74
MRVI1-215ENST00000541483 RANGAP1P46060 587 aaPredicted RBP19.69■□□□□ 0.74
MRVI1-215ENST00000541483 RAPGEF2Q9Y4G8 1499 aa19.69■□□□□ 0.74
MRVI1-215ENST00000541483 CEP164Q9UPV0 1460 aa19.68■□□□□ 0.74
MRVI1-215ENST00000541483 FGD5Q6ZNL6 1462 aa19.65■□□□□ 0.74
MRVI1-215ENST00000541483 TRIM26Q12899 539 aaPredicted RBP19.64■□□□□ 0.74
MRVI1-215ENST00000541483 KIF21BO75037 1637 aa19.64■□□□□ 0.73
MRVI1-215ENST00000541483 TTBK1Q5TCY1 1321 aaPredicted RBP19.62■□□□□ 0.73
MRVI1-215ENST00000541483 KIF27Q86VH2 1401 aa19.61■□□□□ 0.73
MRVI1-215ENST00000541483 LAMC3Q9Y6N6 1575 aa19.6■□□□□ 0.73
MRVI1-215ENST00000541483 CUX2O14529 1486 aa19.59■□□□□ 0.73
MRVI1-215ENST00000541483 TOPBP1Q92547 1522 aa19.55■□□□□ 0.72
MRVI1-215ENST00000541483 RAD54L2Q9Y4B4 1467 aa19.54■□□□□ 0.72
MRVI1-215ENST00000541483 PRXQ9BXM0 1461 aa19.53■□□□□ 0.72
MRVI1-215ENST00000541483 DNMBPQ6XZF7 1577 aa19.53■□□□□ 0.72
MRVI1-215ENST00000541483 URB2Q14146 1524 aaKnown RBP19.51■□□□□ 0.71
MRVI1-215ENST00000541483 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
MRVI1-215ENST00000541483 PDS5BQ9NTI5 1447 aa19.5■□□□□ 0.71
MRVI1-215ENST00000541483 KIF21AQ7Z4S6 1674 aa19.5■□□□□ 0.71
MRVI1-215ENST00000541483 CLIP1P30622 1438 aa19.49■□□□□ 0.71
MRVI1-215ENST00000541483 IGF1RP08069 1367 aa19.46■□□□□ 0.71
MRVI1-215ENST00000541483 ERICH3Q5RHP9 1530 aa19.44■□□□□ 0.7
MRVI1-215ENST00000541483 HRCP23327 699 aa19.4■□□□□ 0.7
MRVI1-215ENST00000541483 CARMIL1Q5VZK9 1371 aa19.37■□□□□ 0.69
MRVI1-215ENST00000541483 ABCA10Q8WWZ4 1543 aa19.37■□□□□ 0.69
MRVI1-215ENST00000541483 TDRD9Q8NDG6 1382 aaKnown RBP19.36■□□□□ 0.69
MRVI1-215ENST00000541483 VPS8Q8N3P4 1428 aa19.3■□□□□ 0.68
MRVI1-215ENST00000541483 ARAP1Q96P48 1450 aa19.26■□□□□ 0.67
MRVI1-215ENST00000541483 WDR97A6NE52 1622 aa19.26■□□□□ 0.67
MRVI1-215ENST00000541483 MRC2Q9UBG0 1479 aa19.24■□□□□ 0.67
MRVI1-215ENST00000541483 GAPVD1Q14C86 1478 aa19.21■□□□□ 0.67
MRVI1-215ENST00000541483 ARHGAP35Q9NRY4 1499 aa19.21■□□□□ 0.67
MRVI1-215ENST00000541483 ERCC6Q03468 1493 aa19.21■□□□□ 0.67
MRVI1-215ENST00000541483 APLP2Q06481 763 aa19.2■□□□□ 0.66
MRVI1-215ENST00000541483 TARBP1Q13395 1621 aaKnown RBP19.2■□□□□ 0.66
MRVI1-215ENST00000541483 ABCA5Q8WWZ7 1642 aa19.2■□□□□ 0.66
MRVI1-215ENST00000541483 P3H3Q8IVL6 736 aa19.19■□□□□ 0.66
MRVI1-215ENST00000541483 AQRO60306 1485 aaKnown RBP eCLIP19.17■□□□□ 0.66
MRVI1-215ENST00000541483 CUL7Q14999 1698 aa19.14■□□□□ 0.65
MRVI1-215ENST00000541483 ZNF608Q9ULD9 1512 aaPredicted RBP19.11■□□□□ 0.65
MRVI1-215ENST00000541483 WDR62O43379 1518 aa19.1■□□□□ 0.65
MRVI1-215ENST00000541483 KANK4Q5T7N3 995 aaPredicted RBP19.1■□□□□ 0.65
MRVI1-215ENST00000541483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms