RNA–Protein interactions for RNA: ENST00000416516.2

DCLK3-201, Transcript of doublecortin like kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene DCLK3, Length 5,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK3-201ENST00000416516 DCAF8L2P0C7V8 631 aa18.45■□□□□ 0.54
DCLK3-201ENST00000416516 NISCHQ9Y2I1 1504 aa17.59■□□□□ 0.41
DCLK3-201ENST00000416516 PELP1Q8IZL8 1130 aaKnown RBP17.51■□□□□ 0.39
DCLK3-201ENST00000416516 SUPT5HO00267 1087 aaKnown RBP17.41■□□□□ 0.38
DCLK3-201ENST00000416516 FAM9AQ8IZU1 332 aaPredicted RBP17.31■□□□□ 0.36
DCLK3-201ENST00000416516 APLP2Q06481 763 aa17.17■□□□□ 0.34
DCLK3-201ENST00000416516 SHROOM4Q9ULL8 1493 aa17.06■□□□□ 0.32
DCLK3-201ENST00000416516 PCGF6Q9BYE7 350 aa16.76■□□□□ 0.27
DCLK3-201ENST00000416516 CCER1Q8TC90 406 aaPredicted RBP16.72■□□□□ 0.27
DCLK3-201ENST00000416516 EHMT2Q96KQ7 1210 aa16.64■□□□□ 0.25
DCLK3-201ENST00000416516 ERICH6Q7L0X2 663 aa16.52■□□□□ 0.24
DCLK3-201ENST00000416516 ZEB1P37275 1124 aaPredicted RBP16.48■□□□□ 0.23
DCLK3-201ENST00000416516 CENPBP07199 599 aaPredicted RBP16.47■□□□□ 0.23
DCLK3-201ENST00000416516 NEFLP07196 543 aa16.26■□□□□ 0.19
DCLK3-201ENST00000416516 HRCP23327 699 aa16.26■□□□□ 0.19
DCLK3-201ENST00000416516 ATP1B4Q9UN42 357 aaPredicted RBP16.26■□□□□ 0.19
DCLK3-201ENST00000416516 TRIM41Q8WV44 630 aa16.22■□□□□ 0.19
DCLK3-201ENST00000416516 TTBK1Q5TCY1 1321 aaPredicted RBP16.17■□□□□ 0.18
DCLK3-201ENST00000416516 MYT1Q01538 1121 aa16.17■□□□□ 0.18
DCLK3-201ENST00000416516 UBTFP17480 764 aaKnown RBP16.14■□□□□ 0.17
DCLK3-201ENST00000416516 RANGAP1P46060 587 aaPredicted RBP16.09■□□□□ 0.17
DCLK3-201ENST00000416516 TRIM26Q12899 539 aaPredicted RBP16.03■□□□□ 0.16
DCLK3-201ENST00000416516 DAXXQ9UER7 740 aaPredicted RBP15.93■□□□□ 0.14
DCLK3-201ENST00000416516 YTHDC1Q96MU7 727 aaKnown RBP15.92■□□□□ 0.14
DCLK3-201ENST00000416516 PPARGC1BQ86YN6 1023 aaKnown RBP15.91■□□□□ 0.14
DCLK3-201ENST00000416516 MYT1LQ9UL68 1186 aa15.9■□□□□ 0.14
DCLK3-201ENST00000416516 CHIC1Q5VXU3 224 aa15.87■□□□□ 0.13
DCLK3-201ENST00000416516 LOC105371045A0A1W2PR82 267 aa15.81■□□□□ 0.12
DCLK3-201ENST00000416516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.78■□□□□ 0.12
DCLK3-201ENST00000416516 HNRNPUL2Q1KMD3 747 aaKnown RBP15.78■□□□□ 0.12
DCLK3-201ENST00000416516 POLR3GLQ9BT43 218 aa15.6■□□□□ 0.09
DCLK3-201ENST00000416516 DIEXFQ68CQ4 756 aaKnown RBP15.52■□□□□ 0.08
DCLK3-201ENST00000416516 ITGAEP38570 1179 aa15.49■□□□□ 0.07
DCLK3-201ENST00000416516 SLC4A1APQ9BWU0 796 aaKnown RBP15.48■□□□□ 0.07
DCLK3-201ENST00000416516 ZNF316A6NFI3 1004 aaPredicted RBP15.46■□□□□ 0.06
DCLK3-201ENST00000416516 CLSPNQ9HAW4 1339 aa15.45■□□□□ 0.06
DCLK3-201ENST00000416516 RTL5Q5HYW3 569 aaPredicted RBP15.41■□□□□ 0.06
DCLK3-201ENST00000416516 GTF3C3Q9Y5Q9 886 aa15.41■□□□□ 0.06
DCLK3-201ENST00000416516 ZBTB47Q9UFB7 747 aaPredicted RBP15.39■□□□□ 0.05
DCLK3-201ENST00000416516 ACIN1Q9UKV3 1341 aaKnown RBP15.27■□□□□ 0.03
DCLK3-201ENST00000416516 NEFMP07197 916 aa15.26■□□□□ 0.03
DCLK3-201ENST00000416516 TRIM52Q96A61 297 aa15.24■□□□□ 0.03
DCLK3-201ENST00000416516 FAM50AQ14320 339 aaKnown RBP15.21■□□□□ 0.02
DCLK3-201ENST00000416516 CNGB1Q14028 1251 aaPredicted RBP15.19■□□□□ 0.02
DCLK3-201ENST00000416516 ANP32CO43423 234 aa15.11■□□□□ 0.01
DCLK3-201ENST00000416516 BCANQ96GW7 911 aa15.06■□□□□ 0
DCLK3-201ENST00000416516 DCAF1Q9Y4B6 1507 aa15.06■□□□□ 0
DCLK3-201ENST00000416516 CANXP27824 592 aaKnown RBP15.06■□□□□ 0
DCLK3-201ENST00000416516 CDK11AQ9UQ88 783 aaPredicted RBP15.03■□□□□ -0
DCLK3-201ENST00000416516 ESF1Q9H501 851 aaKnown RBP15.02□□□□□ -0.01
DCLK3-201ENST00000416516 SCAF1Q9H7N4 1312 aaKnown RBP15.01□□□□□ -0.01
DCLK3-201ENST00000416516 SLC24A1O60721 1099 aa14.98□□□□□ -0.01
DCLK3-201ENST00000416516 NEUROD1Q13562 356 aa14.97□□□□□ -0.01
DCLK3-201ENST00000416516 ZNF326Q5BKZ1 582 aaKnown RBP14.97□□□□□ -0.01
DCLK3-201ENST00000416516 FBLN2P98095 1184 aa14.96□□□□□ -0.01
DCLK3-201ENST00000416516 ANP32BQ92688 251 aaKnown RBP14.88□□□□□ -0.03
DCLK3-201ENST00000416516 NPM1P06748 294 aaKnown RBP eCLIP14.86□□□□□ -0.03
DCLK3-201ENST00000416516 ANP32AP39687 249 aaKnown RBP14.84□□□□□ -0.03
DCLK3-201ENST00000416516 PABPN1Q86U42 306 aaKnown RBP eCLIP14.83□□□□□ -0.03
DCLK3-201ENST00000416516 STAG3Q9UJ98 1225 aa14.82□□□□□ -0.04
DCLK3-201ENST00000416516 UPF2Q9HAU5 1272 aaKnown RBP14.8□□□□□ -0.04
DCLK3-201ENST00000416516 MYO15BQ96JP2 1530 aa14.79□□□□□ -0.04
DCLK3-201ENST00000416516 ABCC9O60706 1549 aa14.78□□□□□ -0.04
DCLK3-201ENST00000416516 CSRNP3Q8WYN3 585 aa14.75□□□□□ -0.05
DCLK3-201ENST00000416516 HSP90AA1P07900 732 aaKnown RBP14.73□□□□□ -0.05
DCLK3-201ENST00000416516 FKBP8Q14318 412 aa14.72□□□□□ -0.05
DCLK3-201ENST00000416516 ZNF777Q9ULD5 760 aaPredicted RBP14.72□□□□□ -0.05
DCLK3-201ENST00000416516 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.7□□□□□ -0.06
DCLK3-201ENST00000416516 BCL11AQ9H165 835 aa14.67□□□□□ -0.06
DCLK3-201ENST00000416516 ZCCHC6Q5VYS8 1495 aaKnown RBP14.67□□□□□ -0.06
DCLK3-201ENST00000416516 MIER1Q8N108 512 aa14.67□□□□□ -0.06
DCLK3-201ENST00000416516 TONSLQ96HA7 1378 aa14.65□□□□□ -0.06
DCLK3-201ENST00000416516 CHGAP10645 457 aaKnown RBP14.65□□□□□ -0.06
DCLK3-201ENST00000416516 NPM2Q86SE8 214 aaKnown RBP14.64□□□□□ -0.07
DCLK3-201ENST00000416516 CDK11BP21127 795 aaKnown RBP14.63□□□□□ -0.07
DCLK3-201ENST00000416516 P3H3Q8IVL6 736 aa14.59□□□□□ -0.07
DCLK3-201ENST00000416516 CCDC180Q9P1Z9 1646 aa14.57□□□□□ -0.08
DCLK3-201ENST00000416516 TSPY4P0CV99 314 aa14.57□□□□□ -0.08
DCLK3-201ENST00000416516 TSPY10P0CW01 314 aa14.57□□□□□ -0.08
DCLK3-201ENST00000416516 DDX10Q13206 875 aaKnown RBP14.56□□□□□ -0.08
DCLK3-201ENST00000416516 EIF5BO60841 1220 aaKnown RBP14.56□□□□□ -0.08
DCLK3-201ENST00000416516 MYH16Q9H6N6 1097 aa14.55□□□□□ -0.08
DCLK3-201ENST00000416516 WDR43Q15061 677 aaKnown RBP eCLIP14.53□□□□□ -0.08
DCLK3-201ENST00000416516 ARID3CA6NKF2 412 aa14.53□□□□□ -0.08
DCLK3-201ENST00000416516 HNRNPUQ00839 825 aaKnown RBP eCLIP14.52□□□□□ -0.08
DCLK3-201ENST00000416516 GLIPR1L2Q4G1C9 344 aa14.52□□□□□ -0.08
DCLK3-201ENST00000416516 TMC1Q8TDI8 760 aa14.5□□□□□ -0.09
DCLK3-201ENST00000416516 ANP32EQ9BTT0 268 aa14.47□□□□□ -0.09
DCLK3-201ENST00000416516 CCDC136Q96JN2 1154 aa14.41□□□□□ -0.1
DCLK3-201ENST00000416516 NCLP19338 710 aaKnown RBP14.41□□□□□ -0.1
DCLK3-201ENST00000416516 CDCA8Q53HL2 280 aa14.4□□□□□ -0.1
DCLK3-201ENST00000416516 NBR1Q14596 966 aa14.4□□□□□ -0.1
DCLK3-201ENST00000416516 FAM9BQ8IZU0 186 aa14.4□□□□□ -0.1
DCLK3-201ENST00000416516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.39□□□□□ -0.11
DCLK3-201ENST00000416516 PPP1R15AO75807 674 aaPredicted RBP14.39□□□□□ -0.11
DCLK3-201ENST00000416516 PLPPR3Q6T4P5 718 aa14.38□□□□□ -0.11
DCLK3-201ENST00000416516 SCRIBQ14160 1630 aa14.37□□□□□ -0.11
DCLK3-201ENST00000416516 CHMP7Q8WUX9 453 aaPredicted RBP14.37□□□□□ -0.11
DCLK3-201ENST00000416516 MTUS2Q5JR59 1369 aa14.36□□□□□ -0.11
DCLK3-201ENST00000416516 CFAP53Q96M91 514 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms