RNA–Protein interactions for RNA: ENST00000537992.5

ITGB8-205, Transcript of integrin subunit beta 8, humanhuman

TSL 2 BASIC

Gene ITGB8, Length 3,420 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB8-205ENST00000537992 NISCHQ9Y2I1 1504 aa24.53■■□□□ 1.52
ITGB8-205ENST00000537992 SHROOM4Q9ULL8 1493 aa21.63■■□□□ 1.05
ITGB8-205ENST00000537992 DCAF8L2P0C7V8 631 aa21.37■■□□□ 1.01
ITGB8-205ENST00000537992 SUPT5HO00267 1087 aaKnown RBP21.35■■□□□ 1.01
ITGB8-205ENST00000537992 CCDC180Q9P1Z9 1646 aa20.96■□□□□ 0.95
ITGB8-205ENST00000537992 ZCCHC6Q5VYS8 1495 aaKnown RBP20.71■□□□□ 0.91
ITGB8-205ENST00000537992 CHIC1Q5VXU3 224 aa20.56■□□□□ 0.88
ITGB8-205ENST00000537992 MYO15BQ96JP2 1530 aa20.4■□□□□ 0.86
ITGB8-205ENST00000537992 ABCC9O60706 1549 aa20.35■□□□□ 0.85
ITGB8-205ENST00000537992 PCGF6Q9BYE7 350 aa20.34■□□□□ 0.85
ITGB8-205ENST00000537992 HRCP23327 699 aa20.22■□□□□ 0.83
ITGB8-205ENST00000537992 LOC105371045A0A1W2PR82 267 aa20.17■□□□□ 0.82
ITGB8-205ENST00000537992 PPARGC1BQ86YN6 1023 aaKnown RBP20.01■□□□□ 0.79
ITGB8-205ENST00000537992 DCAF1Q9Y4B6 1507 aa19.92■□□□□ 0.78
ITGB8-205ENST00000537992 EHMT2Q96KQ7 1210 aa19.84■□□□□ 0.77
ITGB8-205ENST00000537992 FAM9AQ8IZU1 332 aaPredicted RBP19.82■□□□□ 0.76
ITGB8-205ENST00000537992 SCRIBQ14160 1630 aa19.77■□□□□ 0.76
ITGB8-205ENST00000537992 TRIM41Q8WV44 630 aa19.74■□□□□ 0.75
ITGB8-205ENST00000537992 TRIM26Q12899 539 aaPredicted RBP19.7■□□□□ 0.74
ITGB8-205ENST00000537992 NACADO15069 1562 aa19.63■□□□□ 0.73
ITGB8-205ENST00000537992 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
ITGB8-205ENST00000537992 RB1CC1Q8TDY2 1594 aa19.51■□□□□ 0.71
ITGB8-205ENST00000537992 PABPN1Q86U42 306 aaKnown RBP eCLIP19.42■□□□□ 0.7
ITGB8-205ENST00000537992 CECR2Q9BXF3 1484 aa19.31■□□□□ 0.68
ITGB8-205ENST00000537992 ZEB1P37275 1124 aaPredicted RBP19.29■□□□□ 0.68
ITGB8-205ENST00000537992 TTBK1Q5TCY1 1321 aaPredicted RBP19.2■□□□□ 0.66
ITGB8-205ENST00000537992 MROH2BQ7Z745 1585 aa19.18■□□□□ 0.66
ITGB8-205ENST00000537992 UNC13AQ9UPW8 1703 aa19.09■□□□□ 0.65
ITGB8-205ENST00000537992 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.08■□□□□ 0.64
ITGB8-205ENST00000537992 WIZO95785 1651 aa19.06■□□□□ 0.64
ITGB8-205ENST00000537992 CCER1Q8TC90 406 aaPredicted RBP19.04■□□□□ 0.64
ITGB8-205ENST00000537992 BICRAQ9NZM4 1560 aa18.96■□□□□ 0.62
ITGB8-205ENST00000537992 UBTFP17480 764 aaKnown RBP18.88■□□□□ 0.61
ITGB8-205ENST00000537992 BAZ1AQ9NRL2 1556 aaPredicted RBP18.83■□□□□ 0.6
ITGB8-205ENST00000537992 ABCC8Q09428 1581 aa18.82■□□□□ 0.6
ITGB8-205ENST00000537992 SCAF1Q9H7N4 1312 aaKnown RBP18.8■□□□□ 0.6
ITGB8-205ENST00000537992 CCDC88BA6NC98 1476 aa18.78■□□□□ 0.6
ITGB8-205ENST00000537992 SMARCA4P51532 1647 aa18.74■□□□□ 0.59
ITGB8-205ENST00000537992 SOGA1O94964 1423 aa18.73■□□□□ 0.59
ITGB8-205ENST00000537992 CSRNP3Q8WYN3 585 aa18.72■□□□□ 0.59
ITGB8-205ENST00000537992 RANGAP1P46060 587 aaPredicted RBP18.71■□□□□ 0.59
ITGB8-205ENST00000537992 CEP162Q5TB80 1403 aa18.69■□□□□ 0.58
ITGB8-205ENST00000537992 DIEXFQ68CQ4 756 aaKnown RBP18.67■□□□□ 0.58
ITGB8-205ENST00000537992 TOP2AP11388 1531 aaKnown RBP18.65■□□□□ 0.58
ITGB8-205ENST00000537992 RUSC2Q8N2Y8 1516 aa18.62■□□□□ 0.57
ITGB8-205ENST00000537992 HNRNPUL2Q1KMD3 747 aaKnown RBP18.61■□□□□ 0.57
ITGB8-205ENST00000537992 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
ITGB8-205ENST00000537992 NEUROD1Q13562 356 aa18.58■□□□□ 0.56
ITGB8-205ENST00000537992 SMARCA2P51531 1590 aa18.58■□□□□ 0.56
ITGB8-205ENST00000537992 TNIKQ9UKE5 1360 aa18.57■□□□□ 0.56
ITGB8-205ENST00000537992 ACIN1Q9UKV3 1341 aaKnown RBP18.56■□□□□ 0.56
ITGB8-205ENST00000537992 CENPBP07199 599 aaPredicted RBP18.5■□□□□ 0.55
ITGB8-205ENST00000537992 APLP2Q06481 763 aa18.5■□□□□ 0.55
ITGB8-205ENST00000537992 WRNQ14191 1432 aaPredicted RBP eCLIP18.5■□□□□ 0.55
ITGB8-205ENST00000537992 ATAD2BQ9ULI0 1458 aa18.49■□□□□ 0.55
ITGB8-205ENST00000537992 YTHDC1Q96MU7 727 aaKnown RBP18.49■□□□□ 0.55
ITGB8-205ENST00000537992 PELP1Q8IZL8 1130 aaKnown RBP18.48■□□□□ 0.55
ITGB8-205ENST00000537992 GTF3C3Q9Y5Q9 886 aa18.46■□□□□ 0.55
ITGB8-205ENST00000537992 BAZ1BQ9UIG0 1483 aaKnown RBP18.45■□□□□ 0.54
ITGB8-205ENST00000537992 EEA1Q15075 1411 aa18.44■□□□□ 0.54
ITGB8-205ENST00000537992 GOLGA3Q08378 1498 aa18.44■□□□□ 0.54
ITGB8-205ENST00000537992 ZNF316A6NFI3 1004 aaPredicted RBP18.42■□□□□ 0.54
ITGB8-205ENST00000537992 CLIP1P30622 1438 aa18.34■□□□□ 0.53
ITGB8-205ENST00000537992 PEG3Q9GZU2 1588 aa18.31■□□□□ 0.52
ITGB8-205ENST00000537992 CEP164Q9UPV0 1460 aa18.29■□□□□ 0.52
ITGB8-205ENST00000537992 MIER1Q8N108 512 aa18.25■□□□□ 0.51
ITGB8-205ENST00000537992 SYNJ1O43426 1573 aa18.24■□□□□ 0.51
ITGB8-205ENST00000537992 RAPGEF2Q9Y4G8 1499 aa18.21■□□□□ 0.51
ITGB8-205ENST00000537992 NCAPD3P42695 1498 aa18.21■□□□□ 0.51
ITGB8-205ENST00000537992 VPS8Q8N3P4 1428 aa18.18■□□□□ 0.5
ITGB8-205ENST00000537992 CC2D2AQ9P2K1 1620 aa18.17■□□□□ 0.5
ITGB8-205ENST00000537992 ITGAEP38570 1179 aa18.15■□□□□ 0.5
ITGB8-205ENST00000537992 DNAJC5BQ9UF47 199 aa18.14■□□□□ 0.49
ITGB8-205ENST00000537992 HMGXB3Q12766 1538 aa18.09■□□□□ 0.49
ITGB8-205ENST00000537992 KIF21BO75037 1637 aa18.08■□□□□ 0.49
ITGB8-205ENST00000537992 KANK4Q5T7N3 995 aaPredicted RBP18.07■□□□□ 0.48
ITGB8-205ENST00000537992 ATP1B4Q9UN42 357 aaPredicted RBP17.96■□□□□ 0.47
ITGB8-205ENST00000537992 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
ITGB8-205ENST00000537992 TOP2BQ02880 1626 aa17.9■□□□□ 0.46
ITGB8-205ENST00000537992 CADPSQ9ULU8 1353 aa17.89■□□□□ 0.46
ITGB8-205ENST00000537992 CFTRP13569 1480 aa17.88■□□□□ 0.45
ITGB8-205ENST00000537992 KIF27Q86VH2 1401 aa17.88■□□□□ 0.45
ITGB8-205ENST00000537992 NESP48681 1621 aa17.87■□□□□ 0.45
ITGB8-205ENST00000537992 ARAP1Q96P48 1450 aa17.87■□□□□ 0.45
ITGB8-205ENST00000537992 P3H3Q8IVL6 736 aa17.86■□□□□ 0.45
ITGB8-205ENST00000537992 PRXQ9BXM0 1461 aa17.86■□□□□ 0.45
ITGB8-205ENST00000537992 FAM50AQ14320 339 aaKnown RBP17.82■□□□□ 0.44
ITGB8-205ENST00000537992 CLSPNQ9HAW4 1339 aa17.81■□□□□ 0.44
ITGB8-205ENST00000537992 CUX1P39880 1505 aa17.8■□□□□ 0.44
ITGB8-205ENST00000537992 CCNB3Q8WWL7 1395 aa17.8■□□□□ 0.44
ITGB8-205ENST00000537992 ERICH3Q5RHP9 1530 aa17.77■□□□□ 0.44
ITGB8-205ENST00000537992 BIVM-ERCC5R4GMW8 1640 aa17.74■□□□□ 0.43
ITGB8-205ENST00000537992 CUX2O14529 1486 aa17.73■□□□□ 0.43
ITGB8-205ENST00000537992 ARHGAP35Q9NRY4 1499 aa17.72■□□□□ 0.43
ITGB8-205ENST00000537992 FANCD2Q9BXW9 1451 aa17.72■□□□□ 0.43
ITGB8-205ENST00000537992 SIN3AQ96ST3 1273 aa17.7■□□□□ 0.42
ITGB8-205ENST00000537992 RRBP1Q9P2E9 1410 aaKnown RBP17.7■□□□□ 0.42
ITGB8-205ENST00000537992 RAB3GAP2Q9H2M9 1393 aa17.69■□□□□ 0.42
ITGB8-205ENST00000537992 KCNH8Q96L42 1107 aa17.68■□□□□ 0.42
ITGB8-205ENST00000537992 HIRIP3Q9BW71 556 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms