RNA–Protein interactions for RNA: ENST00000360348.6

RUNX1T1-202, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1T1, Length 2,370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-202ENST00000360348 NISCHQ9Y2I1 1504 aa22.84■■□□□ 1.25
RUNX1T1-202ENST00000360348 CCDC180Q9P1Z9 1646 aa20.07■□□□□ 0.8
RUNX1T1-202ENST00000360348 HRCP23327 699 aa19.4■□□□□ 0.7
RUNX1T1-202ENST00000360348 ABCC9O60706 1549 aa19.2■□□□□ 0.66
RUNX1T1-202ENST00000360348 SHROOM4Q9ULL8 1493 aa19.17■□□□□ 0.66
RUNX1T1-202ENST00000360348 ZCCHC6Q5VYS8 1495 aaKnown RBP19.13■□□□□ 0.65
RUNX1T1-202ENST00000360348 SUPT5HO00267 1087 aaKnown RBP19.1■□□□□ 0.65
RUNX1T1-202ENST00000360348 MYO15BQ96JP2 1530 aa19.02■□□□□ 0.63
RUNX1T1-202ENST00000360348 PCGF6Q9BYE7 350 aa18.94■□□□□ 0.62
RUNX1T1-202ENST00000360348 DCAF8L2P0C7V8 631 aa18.9■□□□□ 0.62
RUNX1T1-202ENST00000360348 CHIC1Q5VXU3 224 aa18.9■□□□□ 0.62
RUNX1T1-202ENST00000360348 PPARGC1BQ86YN6 1023 aaKnown RBP18.9■□□□□ 0.62
RUNX1T1-202ENST00000360348 DCAF1Q9Y4B6 1507 aa18.89■□□□□ 0.61
RUNX1T1-202ENST00000360348 NACADO15069 1562 aa18.74■□□□□ 0.59
RUNX1T1-202ENST00000360348 PELP1Q8IZL8 1130 aaKnown RBP18.66■□□□□ 0.58
RUNX1T1-202ENST00000360348 RB1CC1Q8TDY2 1594 aa18.64■□□□□ 0.58
RUNX1T1-202ENST00000360348 TRIM26Q12899 539 aaPredicted RBP18.43■□□□□ 0.54
RUNX1T1-202ENST00000360348 SCRIBQ14160 1630 aa18.39■□□□□ 0.54
RUNX1T1-202ENST00000360348 LOC105371045A0A1W2PR82 267 aa18.38■□□□□ 0.53
RUNX1T1-202ENST00000360348 UNC13AQ9UPW8 1703 aa18.3■□□□□ 0.52
RUNX1T1-202ENST00000360348 ZEB1P37275 1124 aaPredicted RBP18.29■□□□□ 0.52
RUNX1T1-202ENST00000360348 SCAF1Q9H7N4 1312 aaKnown RBP18.29■□□□□ 0.52
RUNX1T1-202ENST00000360348 BICRAQ9NZM4 1560 aa18.1■□□□□ 0.49
RUNX1T1-202ENST00000360348 PABPN1Q86U42 306 aaKnown RBP eCLIP18.03■□□□□ 0.48
RUNX1T1-202ENST00000360348 MYT1Q01538 1121 aa17.93■□□□□ 0.46
RUNX1T1-202ENST00000360348 ACIN1Q9UKV3 1341 aaKnown RBP17.88■□□□□ 0.45
RUNX1T1-202ENST00000360348 NEUROD1Q13562 356 aa17.8■□□□□ 0.44
RUNX1T1-202ENST00000360348 CECR2Q9BXF3 1484 aa17.77■□□□□ 0.43
RUNX1T1-202ENST00000360348 TRIM41Q8WV44 630 aa17.73■□□□□ 0.43
RUNX1T1-202ENST00000360348 GTF3C3Q9Y5Q9 886 aa17.68■□□□□ 0.42
RUNX1T1-202ENST00000360348 BAZ1AQ9NRL2 1556 aaPredicted RBP17.65■□□□□ 0.42
RUNX1T1-202ENST00000360348 MROH2BQ7Z745 1585 aa17.64■□□□□ 0.41
RUNX1T1-202ENST00000360348 CENPBP07199 599 aaPredicted RBP17.63■□□□□ 0.41
RUNX1T1-202ENST00000360348 RSF1Q96T23 1441 aaPredicted RBP17.63■□□□□ 0.41
RUNX1T1-202ENST00000360348 SMARCA4P51532 1647 aa17.62■□□□□ 0.41
RUNX1T1-202ENST00000360348 FAM9AQ8IZU1 332 aaPredicted RBP17.61■□□□□ 0.41
RUNX1T1-202ENST00000360348 EIF4G1Q04637 1599 aaKnown RBP17.57■□□□□ 0.4
RUNX1T1-202ENST00000360348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.57■□□□□ 0.4
RUNX1T1-202ENST00000360348 DIEXFQ68CQ4 756 aaKnown RBP17.57■□□□□ 0.4
RUNX1T1-202ENST00000360348 CCER1Q8TC90 406 aaPredicted RBP17.54■□□□□ 0.4
RUNX1T1-202ENST00000360348 WIZO95785 1651 aa17.49■□□□□ 0.39
RUNX1T1-202ENST00000360348 EHMT2Q96KQ7 1210 aa17.45■□□□□ 0.38
RUNX1T1-202ENST00000360348 PEG3Q9GZU2 1588 aa17.43■□□□□ 0.38
RUNX1T1-202ENST00000360348 ATAD2BQ9ULI0 1458 aa17.39■□□□□ 0.37
RUNX1T1-202ENST00000360348 CC2D2AQ9P2K1 1620 aa17.38■□□□□ 0.37
RUNX1T1-202ENST00000360348 SMARCA2P51531 1590 aa17.37■□□□□ 0.37
RUNX1T1-202ENST00000360348 NCAPD3P42695 1498 aa17.29■□□□□ 0.36
RUNX1T1-202ENST00000360348 TOP2AP11388 1531 aaKnown RBP17.28■□□□□ 0.36
RUNX1T1-202ENST00000360348 ZNF316A6NFI3 1004 aaPredicted RBP17.28■□□□□ 0.36
RUNX1T1-202ENST00000360348 BAZ1BQ9UIG0 1483 aaKnown RBP17.27■□□□□ 0.36
RUNX1T1-202ENST00000360348 WRNQ14191 1432 aaPredicted RBP eCLIP17.25■□□□□ 0.35
RUNX1T1-202ENST00000360348 HMGXB3Q12766 1538 aa17.25■□□□□ 0.35
RUNX1T1-202ENST00000360348 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
RUNX1T1-202ENST00000360348 YTHDC1Q96MU7 727 aaKnown RBP17.17■□□□□ 0.34
RUNX1T1-202ENST00000360348 MIER1Q8N108 512 aa17.13■□□□□ 0.33
RUNX1T1-202ENST00000360348 CCDC88BA6NC98 1476 aa17.1■□□□□ 0.33
RUNX1T1-202ENST00000360348 CEP162Q5TB80 1403 aa17.08■□□□□ 0.32
RUNX1T1-202ENST00000360348 TTBK1Q5TCY1 1321 aaPredicted RBP17.06■□□□□ 0.32
RUNX1T1-202ENST00000360348 TNIKQ9UKE5 1360 aa17■□□□□ 0.31
RUNX1T1-202ENST00000360348 CLSPNQ9HAW4 1339 aa16.94■□□□□ 0.3
RUNX1T1-202ENST00000360348 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
RUNX1T1-202ENST00000360348 SUPT16HQ9Y5B9 1047 aaKnown RBP16.88■□□□□ 0.29
RUNX1T1-202ENST00000360348 SOGA1O94964 1423 aa16.87■□□□□ 0.29
RUNX1T1-202ENST00000360348 EEA1Q15075 1411 aa16.85■□□□□ 0.29
RUNX1T1-202ENST00000360348 CFTRP13569 1480 aa16.83■□□□□ 0.28
RUNX1T1-202ENST00000360348 CADPSQ9ULU8 1353 aa16.82■□□□□ 0.28
RUNX1T1-202ENST00000360348 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
RUNX1T1-202ENST00000360348 ANP32EQ9BTT0 268 aa16.81■□□□□ 0.28
RUNX1T1-202ENST00000360348 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
RUNX1T1-202ENST00000360348 TSHZ2Q9NRE2 1034 aa16.8■□□□□ 0.28
RUNX1T1-202ENST00000360348 UBTFP17480 764 aaKnown RBP16.79■□□□□ 0.28
RUNX1T1-202ENST00000360348 NESP48681 1621 aa16.78■□□□□ 0.28
RUNX1T1-202ENST00000360348 GOLGA3Q08378 1498 aa16.78■□□□□ 0.28
RUNX1T1-202ENST00000360348 RUSC2Q8N2Y8 1516 aa16.77■□□□□ 0.28
RUNX1T1-202ENST00000360348 PRDM2Q13029 1718 aa16.76■□□□□ 0.27
RUNX1T1-202ENST00000360348 LAMC3Q9Y6N6 1575 aa16.76■□□□□ 0.27
RUNX1T1-202ENST00000360348 BCL11AQ9H165 835 aa16.71■□□□□ 0.26
RUNX1T1-202ENST00000360348 FANCD2Q9BXW9 1451 aa16.64■□□□□ 0.25
RUNX1T1-202ENST00000360348 VPS8Q8N3P4 1428 aa16.63■□□□□ 0.25
RUNX1T1-202ENST00000360348 CLIP1P30622 1438 aa16.62■□□□□ 0.25
RUNX1T1-202ENST00000360348 KIF21BO75037 1637 aa16.62■□□□□ 0.25
RUNX1T1-202ENST00000360348 CEP164Q9UPV0 1460 aa16.61■□□□□ 0.25
RUNX1T1-202ENST00000360348 PDS5BQ9NTI5 1447 aa16.61■□□□□ 0.25
RUNX1T1-202ENST00000360348 DHX57Q6P158 1386 aaKnown RBP16.61■□□□□ 0.25
RUNX1T1-202ENST00000360348 KIF21AQ7Z4S6 1674 aa16.59■□□□□ 0.25
RUNX1T1-202ENST00000360348 SYNJ1O43426 1573 aa16.53■□□□□ 0.24
RUNX1T1-202ENST00000360348 APLP2Q06481 763 aa16.53■□□□□ 0.24
RUNX1T1-202ENST00000360348 CUX1P39880 1505 aa16.51■□□□□ 0.23
RUNX1T1-202ENST00000360348 TOP2BQ02880 1626 aa16.49■□□□□ 0.23
RUNX1T1-202ENST00000360348 BIVM-ERCC5R4GMW8 1640 aa16.48■□□□□ 0.23
RUNX1T1-202ENST00000360348 ERCC6Q03468 1493 aa16.47■□□□□ 0.23
RUNX1T1-202ENST00000360348 URB2Q14146 1524 aaKnown RBP16.45■□□□□ 0.22
RUNX1T1-202ENST00000360348 DNMBPQ6XZF7 1577 aa16.44■□□□□ 0.22
RUNX1T1-202ENST00000360348 KCNH8Q96L42 1107 aa16.44■□□□□ 0.22
RUNX1T1-202ENST00000360348 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
RUNX1T1-202ENST00000360348 RAPGEF2Q9Y4G8 1499 aa16.43■□□□□ 0.22
RUNX1T1-202ENST00000360348 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
RUNX1T1-202ENST00000360348 BCANQ96GW7 911 aa16.41■□□□□ 0.22
RUNX1T1-202ENST00000360348 FKBP8Q14318 412 aa16.4■□□□□ 0.22
RUNX1T1-202ENST00000360348 RBM19Q9Y4C8 960 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms