Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC17.63■□□□□ 0.41
RPGRQ92834 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
RPGRQ92834 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPGRQ92834 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPGRQ92834 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPGRQ92834 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
RPGRQ92834 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPGRQ92834 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.62■□□□□ 0.41
RPGRQ92834 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPGRQ92834 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPGRQ92834 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RPGRQ92834 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.62■□□□□ 0.41
RPGRQ92834 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC17.62■□□□□ 0.41
RPGRQ92834 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC17.62■□□□□ 0.41
RPGRQ92834 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.62■□□□□ 0.41
RPGRQ92834 AC008026.2-201ENST00000495438 348 ntBASIC17.62■□□□□ 0.41
RPGRQ92834 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC17.62■□□□□ 0.41
RPGRQ92834 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPGRQ92834 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC17.62■□□□□ 0.41
RPGRQ92834 CMC2-204ENST00000562713 573 ntTSL 3 BASIC17.62■□□□□ 0.41
RPGRQ92834 CMC2-209ENST00000565108 399 ntTSL 2 BASIC17.62■□□□□ 0.41
RPGRQ92834 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC17.62■□□□□ 0.41
RPGRQ92834 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC17.62■□□□□ 0.41
RPGRQ92834 PEBP1P2-201ENST00000603980 558 ntBASIC17.62■□□□□ 0.41
RPGRQ92834 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPGRQ92834 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.62■□□□□ 0.41
RPGRQ92834 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.62■□□□□ 0.41
RPGRQ92834 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RPGRQ92834 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RPGRQ92834 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPGRQ92834 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.62■□□□□ 0.41
RPGRQ92834 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPGRQ92834 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RPGRQ92834 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPGRQ92834 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPGRQ92834 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
RPGRQ92834 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPGRQ92834 AL672207.1-201ENST00000328462 1570 ntBASIC17.62■□□□□ 0.41
RPGRQ92834 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPGRQ92834 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPGRQ92834 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.61■□□□□ 0.41
RPGRQ92834 ODCP-201ENST00000459650 1639 ntBASIC17.61■□□□□ 0.41
RPGRQ92834 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.61■□□□□ 0.41
RPGRQ92834 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RPGRQ92834 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.61■□□□□ 0.41
RPGRQ92834 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC17.61■□□□□ 0.41
RPGRQ92834 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RPGRQ92834 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC17.61■□□□□ 0.41
RPGRQ92834 TREHP1-201ENST00000531328 465 ntBASIC17.61■□□□□ 0.41
RPGRQ92834 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC17.61■□□□□ 0.41
RPGRQ92834 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC17.61■□□□□ 0.41
RPGRQ92834 TRMT112P3-201ENST00000580149 358 ntBASIC17.61■□□□□ 0.41
RPGRQ92834 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RPGRQ92834 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RPGRQ92834 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RPGRQ92834 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RPGRQ92834 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.61■□□□□ 0.41
RPGRQ92834 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 KRT8P18-201ENST00000413425 1445 ntBASIC17.61■□□□□ 0.41
RPGRQ92834 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.61■□□□□ 0.41
RPGRQ92834 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 AC019109.1-201ENST00000401725 1874 ntBASIC17.61■□□□□ 0.41
RPGRQ92834 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RPGRQ92834 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPGRQ92834 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPGRQ92834 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPGRQ92834 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPGRQ92834 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RPGRQ92834 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPGRQ92834 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RPGRQ92834 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPGRQ92834 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPGRQ92834 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPGRQ92834 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPGRQ92834 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPGRQ92834 COX20P1-201ENST00000366529 357 ntBASIC17.6■□□□□ 0.41
RPGRQ92834 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC17.6■□□□□ 0.41
RPGRQ92834 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC17.6■□□□□ 0.41
RPGRQ92834 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPGRQ92834 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC17.6■□□□□ 0.41
RPGRQ92834 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPGRQ92834 RN7SL582P-201ENST00000491078 279 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms