RNA–Protein interactions for RNA: ENST00000409716.6

TPRKB-203, Transcript of TP53RK binding protein, humanhuman

TSL 5 BASIC

Gene TPRKB, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKB-203ENST00000409716 NISCHQ9Y2I1 1504 aa33.29■■■□□ 2.92
TPRKB-203ENST00000409716 AEBP2Q6ZN18 517 aaPredicted RBP29.8■■■□□ 2.36
TPRKB-203ENST00000409716 CCDC180Q9P1Z9 1646 aa29.79■■■□□ 2.36
TPRKB-203ENST00000409716 ABCC9O60706 1549 aa29.33■■■□□ 2.29
TPRKB-203ENST00000409716 RB1CC1Q8TDY2 1594 aa28.19■■■□□ 2.1
TPRKB-203ENST00000409716 NACADO15069 1562 aa28.08■■■□□ 2.09
TPRKB-203ENST00000409716 CHIC1Q5VXU3 224 aa28■■■□□ 2.07
TPRKB-203ENST00000409716 DCAF8L2P0C7V8 631 aa27.99■■■□□ 2.07
TPRKB-203ENST00000409716 MYO15BQ96JP2 1530 aa27.83■■■□□ 2.05
TPRKB-203ENST00000409716 ZCCHC6Q5VYS8 1495 aaKnown RBP27.64■■■□□ 2.02
TPRKB-203ENST00000409716 DCAF1Q9Y4B6 1507 aa27.58■■■□□ 2.01
TPRKB-203ENST00000409716 UNC13AQ9UPW8 1703 aa27.47■■□□□ 1.99
TPRKB-203ENST00000409716 PABPN1Q86U42 306 aaKnown RBP eCLIP27.35■■□□□ 1.97
TPRKB-203ENST00000409716 BICRAQ9NZM4 1560 aa27.22■■□□□ 1.95
TPRKB-203ENST00000409716 DNAJC5BQ9UF47 199 aa27.12■■□□□ 1.93
TPRKB-203ENST00000409716 SHROOM4Q9ULL8 1493 aa27.06■■□□□ 1.92
TPRKB-203ENST00000409716 SCRIBQ14160 1630 aa27.06■■□□□ 1.92
TPRKB-203ENST00000409716 EIF4G1Q04637 1599 aaKnown RBP26.58■■□□□ 1.85
TPRKB-203ENST00000409716 CC2D2AQ9P2K1 1620 aa26.54■■□□□ 1.84
TPRKB-203ENST00000409716 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
TPRKB-203ENST00000409716 SMARCA4P51532 1647 aa25.89■■□□□ 1.74
TPRKB-203ENST00000409716 NCAPD3P42695 1498 aa25.89■■□□□ 1.73
TPRKB-203ENST00000409716 BAZ1AQ9NRL2 1556 aaPredicted RBP25.87■■□□□ 1.73
TPRKB-203ENST00000409716 SMARCA2P51531 1590 aa25.85■■□□□ 1.73
TPRKB-203ENST00000409716 ATAD2BQ9ULI0 1458 aa25.82■■□□□ 1.72
TPRKB-203ENST00000409716 HMGXB3Q12766 1538 aa25.73■■□□□ 1.71
TPRKB-203ENST00000409716 PEG3Q9GZU2 1588 aa25.67■■□□□ 1.7
TPRKB-203ENST00000409716 BAZ1BQ9UIG0 1483 aaKnown RBP25.63■■□□□ 1.69
TPRKB-203ENST00000409716 MROH2BQ7Z745 1585 aa25.6■■□□□ 1.69
TPRKB-203ENST00000409716 ERCC6Q03468 1493 aa25.39■■□□□ 1.65
TPRKB-203ENST00000409716 WIZO95785 1651 aa25.33■■□□□ 1.65
TPRKB-203ENST00000409716 SENP3Q9H4L4 574 aaPredicted RBP25.32■■□□□ 1.64
TPRKB-203ENST00000409716 LAMC3Q9Y6N6 1575 aa25.28■■□□□ 1.64
TPRKB-203ENST00000409716 NESP48681 1621 aa25.26■■□□□ 1.63
TPRKB-203ENST00000409716 CUX2O14529 1486 aa25.23■■□□□ 1.63
TPRKB-203ENST00000409716 RSF1Q96T23 1441 aaPredicted RBP25.22■■□□□ 1.63
TPRKB-203ENST00000409716 PDS5BQ9NTI5 1447 aa25.14■■□□□ 1.62
TPRKB-203ENST00000409716 CADPSQ9ULU8 1353 aa25.12■■□□□ 1.61
TPRKB-203ENST00000409716 TOP2AP11388 1531 aaKnown RBP25.08■■□□□ 1.61
TPRKB-203ENST00000409716 KIF21AQ7Z4S6 1674 aa25.01■■□□□ 1.59
TPRKB-203ENST00000409716 PHF23Q9BUL5 403 aaPredicted RBP24.98■■□□□ 1.59
TPRKB-203ENST00000409716 THOC2Q8NI27 1593 aaKnown RBP24.97■■□□□ 1.59
TPRKB-203ENST00000409716 CFTRP13569 1480 aa24.89■■□□□ 1.57
TPRKB-203ENST00000409716 MRC2Q9UBG0 1479 aa24.84■■□□□ 1.57
TPRKB-203ENST00000409716 CEP164Q9UPV0 1460 aa24.83■■□□□ 1.57
TPRKB-203ENST00000409716 FANCD2Q9BXW9 1451 aa24.81■■□□□ 1.56
TPRKB-203ENST00000409716 DNAJC5Q9H3Z4 198 aa24.78■■□□□ 1.56
TPRKB-203ENST00000409716 CCDC88BA6NC98 1476 aa24.77■■□□□ 1.56
TPRKB-203ENST00000409716 WDR62O43379 1518 aa24.76■■□□□ 1.55
TPRKB-203ENST00000409716 PRDM2Q13029 1718 aa24.73■■□□□ 1.55
TPRKB-203ENST00000409716 URB2Q14146 1524 aaKnown RBP24.53■■□□□ 1.52
TPRKB-203ENST00000409716 ABCC8Q09428 1581 aa24.47■■□□□ 1.51
TPRKB-203ENST00000409716 SUPT5HO00267 1087 aaKnown RBP24.4■■□□□ 1.5
TPRKB-203ENST00000409716 TOPBP1Q92547 1522 aa24.36■■□□□ 1.49
TPRKB-203ENST00000409716 DNMBPQ6XZF7 1577 aa24.34■■□□□ 1.49
TPRKB-203ENST00000409716 IFT140Q96RY7 1462 aa24.33■■□□□ 1.49
TPRKB-203ENST00000409716 OSCARQ8IYS5 282 aa24.17■■□□□ 1.46
TPRKB-203ENST00000409716 ZNF608Q9ULD9 1512 aaPredicted RBP24.15■■□□□ 1.46
TPRKB-203ENST00000409716 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
TPRKB-203ENST00000409716 TARBP1Q13395 1621 aaKnown RBP24.11■■□□□ 1.45
TPRKB-203ENST00000409716 EIF4G3O43432 1585 aaKnown RBP24.09■■□□□ 1.45
TPRKB-203ENST00000409716 SOGA1O94964 1423 aa24.08■■□□□ 1.44
TPRKB-203ENST00000409716 FGD5Q6ZNL6 1462 aa24.04■■□□□ 1.44
TPRKB-203ENST00000409716 CUX1P39880 1505 aa24.04■■□□□ 1.44
TPRKB-203ENST00000409716 WDR97A6NE52 1622 aa24.02■■□□□ 1.44
TPRKB-203ENST00000409716 AQRO60306 1485 aaKnown RBP eCLIP24.01■■□□□ 1.432e-9■■■■■ 39.4
TPRKB-203ENST00000409716 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
TPRKB-203ENST00000409716 TDRD9Q8NDG6 1382 aaKnown RBP23.93■■□□□ 1.42
TPRKB-203ENST00000409716 FBLN2P98095 1184 aa23.86■■□□□ 1.41
TPRKB-203ENST00000409716 CHD1O14646 1710 aa23.85■■□□□ 1.41
TPRKB-203ENST00000409716 WRNQ14191 1432 aaPredicted RBP eCLIP23.84■■□□□ 1.41
TPRKB-203ENST00000409716 GRIN2BQ13224 1484 aa23.83■■□□□ 1.41
TPRKB-203ENST00000409716 MAGI1Q96QZ7 1491 aaPredicted RBP23.81■■□□□ 1.4
TPRKB-203ENST00000409716 TOP2BQ02880 1626 aa23.81■■□□□ 1.4
TPRKB-203ENST00000409716 BIVM-ERCC5R4GMW8 1640 aa23.81■■□□□ 1.4
TPRKB-203ENST00000409716 ABCA10Q8WWZ4 1543 aa23.81■■□□□ 1.4
TPRKB-203ENST00000409716 TRIM41Q8WV44 630 aa23.81■■□□□ 1.4
TPRKB-203ENST00000409716 GAPVD1Q14C86 1478 aa23.79■■□□□ 1.4
TPRKB-203ENST00000409716 SNAPC4Q5SXM2 1469 aa23.79■■□□□ 1.4
TPRKB-203ENST00000409716 CHMP7Q8WUX9 453 aaPredicted RBP23.78■■□□□ 1.4
TPRKB-203ENST00000409716 PBRM1Q86U86 1689 aa23.75■■□□□ 1.39
TPRKB-203ENST00000409716 SYNJ1O43426 1573 aa23.73■■□□□ 1.39
TPRKB-203ENST00000409716 RIMBP3CA6NJZ7 1639 aa23.72■■□□□ 1.39
TPRKB-203ENST00000409716 RIMBP3BA6NNM3 1639 aa23.72■■□□□ 1.39
TPRKB-203ENST00000409716 ABCA5Q8WWZ7 1642 aa23.72■■□□□ 1.39
TPRKB-203ENST00000409716 RIMBP3Q9UFD9 1639 aa23.72■■□□□ 1.39
TPRKB-203ENST00000409716 SYNJ2O15056 1496 aa23.71■■□□□ 1.39
TPRKB-203ENST00000409716 FOXD1Q16676 465 aa23.7■■□□□ 1.38
TPRKB-203ENST00000409716 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
TPRKB-203ENST00000409716 CLASP1Q7Z460 1538 aa23.57■■□□□ 1.36
TPRKB-203ENST00000409716 ERICH3Q5RHP9 1530 aa23.55■■□□□ 1.36
TPRKB-203ENST00000409716 CYB5RLQ6IPT4 315 aa23.52■■□□□ 1.36
TPRKB-203ENST00000409716 FHAD1B1AJZ9 1412 aa23.51■■□□□ 1.35
TPRKB-203ENST00000409716 ADAMTS12P58397 1594 aa23.51■■□□□ 1.35
TPRKB-203ENST00000409716 GRIN2AQ12879 1464 aa23.5■■□□□ 1.35
TPRKB-203ENST00000409716 ARAP1Q96P48 1450 aa23.43■■□□□ 1.34
TPRKB-203ENST00000409716 KIF27Q86VH2 1401 aa23.41■■□□□ 1.34
TPRKB-203ENST00000409716 NUP160Q12769 1436 aa23.39■■□□□ 1.33
TPRKB-203ENST00000409716 CEP170Q5SW79 1584 aa23.35■■□□□ 1.33
TPRKB-203ENST00000409716 CUL7Q14999 1698 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms