Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
USH1GQ495M9 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
USH1GQ495M9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.57■□□□□ 0.24
USH1GQ495M9 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USH1GQ495M9 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.57■□□□□ 0.24
USH1GQ495M9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USH1GQ495M9 AL390755.1-201ENST00000623716 2027 ntBASIC16.57■□□□□ 0.24
USH1GQ495M9 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.57■□□□□ 0.24
USH1GQ495M9 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USH1GQ495M9 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USH1GQ495M9 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USH1GQ495M9 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
USH1GQ495M9 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USH1GQ495M9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USH1GQ495M9 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.57■□□□□ 0.24
USH1GQ495M9 AC064801.2-201ENST00000625052 1303 ntBASIC16.57■□□□□ 0.24
USH1GQ495M9 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
USH1GQ495M9 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
USH1GQ495M9 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.57■□□□□ 0.24
USH1GQ495M9 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.57■□□□□ 0.24
USH1GQ495M9 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.57■□□□□ 0.24
USH1GQ495M9 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.57■□□□□ 0.24
USH1GQ495M9 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USH1GQ495M9 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.57■□□□□ 0.24
USH1GQ495M9 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USH1GQ495M9 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
USH1GQ495M9 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
USH1GQ495M9 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USH1GQ495M9 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USH1GQ495M9 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
USH1GQ495M9 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.57■□□□□ 0.24
USH1GQ495M9 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.57■□□□□ 0.24
USH1GQ495M9 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
USH1GQ495M9 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.57■□□□□ 0.24
USH1GQ495M9 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
USH1GQ495M9 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USH1GQ495M9 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
USH1GQ495M9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USH1GQ495M9 AC012617.1-204ENST00000586340 2305 ntBASIC16.57■□□□□ 0.24
USH1GQ495M9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.57■□□□□ 0.24
USH1GQ495M9 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USH1GQ495M9 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USH1GQ495M9 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
USH1GQ495M9 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
USH1GQ495M9 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.56■□□□□ 0.24
USH1GQ495M9 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.56■□□□□ 0.24
USH1GQ495M9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.56■□□□□ 0.24
USH1GQ495M9 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.56■□□□□ 0.24
USH1GQ495M9 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 KRT18P9-201ENST00000604826 1300 ntBASIC16.56■□□□□ 0.24
USH1GQ495M9 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
USH1GQ495M9 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
USH1GQ495M9 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.56■□□□□ 0.24
USH1GQ495M9 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.56■□□□□ 0.24
USH1GQ495M9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.56■□□□□ 0.24
USH1GQ495M9 MAGEA5-201ENST00000446757 942 ntBASIC16.56■□□□□ 0.24
USH1GQ495M9 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.56■□□□□ 0.24
USH1GQ495M9 RPSAP15-201ENST00000448168 861 ntBASIC16.56■□□□□ 0.24
USH1GQ495M9 FGFR3P1-201ENST00000449999 601 ntBASIC16.56■□□□□ 0.24
USH1GQ495M9 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.56■□□□□ 0.24
USH1GQ495M9 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.56■□□□□ 0.24
USH1GQ495M9 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.56■□□□□ 0.24
USH1GQ495M9 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.56■□□□□ 0.24
USH1GQ495M9 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.56■□□□□ 0.24
USH1GQ495M9 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.56■□□□□ 0.24
USH1GQ495M9 AC140658.4-201ENST00000561990 352 ntBASIC16.56■□□□□ 0.24
USH1GQ495M9 MIR6074-201ENST00000612054 107 ntBASIC16.56■□□□□ 0.24
USH1GQ495M9 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.56■□□□□ 0.24
USH1GQ495M9 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.56■□□□□ 0.24
USH1GQ495M9 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.56■□□□□ 0.24
USH1GQ495M9 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.56■□□□□ 0.24
USH1GQ495M9 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.56■□□□□ 0.24
USH1GQ495M9 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
USH1GQ495M9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.56■□□□□ 0.24
USH1GQ495M9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.56■□□□□ 0.24
USH1GQ495M9 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.56■□□□□ 0.24
USH1GQ495M9 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
USH1GQ495M9 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USH1GQ495M9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
USH1GQ495M9 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms