RNA–Protein interactions for RNA: ENST00000525631.1

TMEM223-202, Transcript of transmembrane protein 223, humanhuman

TSL 1 (best) BASIC

Gene TMEM223, Length 736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM223-202ENST00000525631 NISCHQ9Y2I1 1504 aa34.48■■■■□ 3.11
TMEM223-202ENST00000525631 CCDC180Q9P1Z9 1646 aa30.72■■■□□ 2.51
TMEM223-202ENST00000525631 ABCC9O60706 1549 aa30.02■■■□□ 2.4
TMEM223-202ENST00000525631 RB1CC1Q8TDY2 1594 aa28.92■■■□□ 2.22
TMEM223-202ENST00000525631 DCAF8L2P0C7V8 631 aa28.88■■■□□ 2.21
TMEM223-202ENST00000525631 NACADO15069 1562 aa28.88■■■□□ 2.21
TMEM223-202ENST00000525631 ZCCHC6Q5VYS8 1495 aaKnown RBP28.71■■■□□ 2.19
TMEM223-202ENST00000525631 MYO15BQ96JP2 1530 aa28.67■■■□□ 2.18
TMEM223-202ENST00000525631 DCAF1Q9Y4B6 1507 aa28.53■■■□□ 2.16
TMEM223-202ENST00000525631 UNC13AQ9UPW8 1703 aa28.26■■■□□ 2.12
TMEM223-202ENST00000525631 PABPN1Q86U42 306 aaKnown RBP eCLIP28.04■■■□□ 2.08
TMEM223-202ENST00000525631 SCRIBQ14160 1630 aa28■■■□□ 2.07
TMEM223-202ENST00000525631 BICRAQ9NZM4 1560 aa27.97■■■□□ 2.07
TMEM223-202ENST00000525631 SHROOM4Q9ULL8 1493 aa27.73■■■□□ 2.03
TMEM223-202ENST00000525631 DNAJC5BQ9UF47 199 aa27.5■■□□□ 1.99
TMEM223-202ENST00000525631 EIF4G1Q04637 1599 aaKnown RBP27.26■■□□□ 1.96
TMEM223-202ENST00000525631 CC2D2AQ9P2K1 1620 aa27.17■■□□□ 1.94
TMEM223-202ENST00000525631 CECR2Q9BXF3 1484 aa26.99■■□□□ 1.91
TMEM223-202ENST00000525631 SMARCA4P51532 1647 aa26.78■■□□□ 1.88
TMEM223-202ENST00000525631 BAZ1AQ9NRL2 1556 aaPredicted RBP26.76■■□□□ 1.87
TMEM223-202ENST00000525631 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
TMEM223-202ENST00000525631 ATAD2BQ9ULI0 1458 aa26.61■■□□□ 1.85
TMEM223-202ENST00000525631 NCAPD3P42695 1498 aa26.6■■□□□ 1.85
TMEM223-202ENST00000525631 MROH2BQ7Z745 1585 aa26.55■■□□□ 1.84
TMEM223-202ENST00000525631 PEG3Q9GZU2 1588 aa26.5■■□□□ 1.83
TMEM223-202ENST00000525631 HMGXB3Q12766 1538 aa26.49■■□□□ 1.83
TMEM223-202ENST00000525631 BAZ1BQ9UIG0 1483 aaKnown RBP26.42■■□□□ 1.82
TMEM223-202ENST00000525631 WIZO95785 1651 aa26.31■■□□□ 1.8
TMEM223-202ENST00000525631 RSF1Q96T23 1441 aaPredicted RBP26.23■■□□□ 1.79
TMEM223-202ENST00000525631 TOP2AP11388 1531 aaKnown RBP26.03■■□□□ 1.76
TMEM223-202ENST00000525631 NESP48681 1621 aa25.95■■□□□ 1.74
TMEM223-202ENST00000525631 LAMC3Q9Y6N6 1575 aa25.95■■□□□ 1.74
TMEM223-202ENST00000525631 ERCC6Q03468 1493 aa25.93■■□□□ 1.74
TMEM223-202ENST00000525631 CADPSQ9ULU8 1353 aa25.83■■□□□ 1.73
TMEM223-202ENST00000525631 PDS5BQ9NTI5 1447 aa25.78■■□□□ 1.72
TMEM223-202ENST00000525631 KIF21AQ7Z4S6 1674 aa25.71■■□□□ 1.71
TMEM223-202ENST00000525631 CCDC88BA6NC98 1476 aa25.7■■□□□ 1.7
TMEM223-202ENST00000525631 CFTRP13569 1480 aa25.66■■□□□ 1.7
TMEM223-202ENST00000525631 CUX2O14529 1486 aa25.64■■□□□ 1.69
TMEM223-202ENST00000525631 SUPT5HO00267 1087 aaKnown RBP25.63■■□□□ 1.69
TMEM223-202ENST00000525631 THOC2Q8NI27 1593 aaKnown RBP25.59■■□□□ 1.69
TMEM223-202ENST00000525631 PRDM2Q13029 1718 aa25.57■■□□□ 1.68
TMEM223-202ENST00000525631 FANCD2Q9BXW9 1451 aa25.55■■□□□ 1.68
TMEM223-202ENST00000525631 CEP164Q9UPV0 1460 aa25.54■■□□□ 1.68
TMEM223-202ENST00000525631 MRC2Q9UBG0 1479 aa25.49■■□□□ 1.67
TMEM223-202ENST00000525631 WDR62O43379 1518 aa25.39■■□□□ 1.66
TMEM223-202ENST00000525631 URB2Q14146 1524 aaKnown RBP25.27■■□□□ 1.64
TMEM223-202ENST00000525631 ABCC8Q09428 1581 aa25.18■■□□□ 1.62
TMEM223-202ENST00000525631 TOPBP1Q92547 1522 aa25.13■■□□□ 1.61
TMEM223-202ENST00000525631 DNMBPQ6XZF7 1577 aa25.13■■□□□ 1.61
TMEM223-202ENST00000525631 IFT140Q96RY7 1462 aa25■■□□□ 1.59
TMEM223-202ENST00000525631 CUX1P39880 1505 aa24.91■■□□□ 1.58
TMEM223-202ENST00000525631 POLA1P09884 1462 aaPredicted RBP24.91■■□□□ 1.58
TMEM223-202ENST00000525631 FGD5Q6ZNL6 1462 aa24.86■■□□□ 1.57
TMEM223-202ENST00000525631 TARBP1Q13395 1621 aaKnown RBP24.86■■□□□ 1.57
TMEM223-202ENST00000525631 DNAJC5Q9H3Z4 198 aa24.84■■□□□ 1.57
TMEM223-202ENST00000525631 ZNF608Q9ULD9 1512 aaPredicted RBP24.83■■□□□ 1.57
TMEM223-202ENST00000525631 SOGA1O94964 1423 aa24.83■■□□□ 1.57
TMEM223-202ENST00000525631 RAD54L2Q9Y4B4 1467 aa24.79■■□□□ 1.56
TMEM223-202ENST00000525631 WRNQ14191 1432 aaPredicted RBP eCLIP24.78■■□□□ 1.56
TMEM223-202ENST00000525631 EIF4G3O43432 1585 aaKnown RBP24.78■■□□□ 1.56
TMEM223-202ENST00000525631 BIVM-ERCC5R4GMW8 1640 aa24.75■■□□□ 1.55
TMEM223-202ENST00000525631 TOP2BQ02880 1626 aa24.73■■□□□ 1.55
TMEM223-202ENST00000525631 AQRO60306 1485 aaKnown RBP eCLIP24.71■■□□□ 1.55
TMEM223-202ENST00000525631 WDR97A6NE52 1622 aa24.71■■□□□ 1.55
TMEM223-202ENST00000525631 SYNJ1O43426 1573 aa24.7■■□□□ 1.54
TMEM223-202ENST00000525631 TDRD9Q8NDG6 1382 aaKnown RBP24.67■■□□□ 1.54
TMEM223-202ENST00000525631 ABCA10Q8WWZ4 1543 aa24.61■■□□□ 1.53
TMEM223-202ENST00000525631 OSCARQ8IYS5 282 aa24.59■■□□□ 1.53
TMEM223-202ENST00000525631 GRIN2BQ13224 1484 aa24.55■■□□□ 1.52
TMEM223-202ENST00000525631 GAPVD1Q14C86 1478 aa24.55■■□□□ 1.52
TMEM223-202ENST00000525631 PBRM1Q86U86 1689 aa24.53■■□□□ 1.52
TMEM223-202ENST00000525631 ABCA5Q8WWZ7 1642 aa24.53■■□□□ 1.52
TMEM223-202ENST00000525631 CHD1O14646 1710 aa24.51■■□□□ 1.51
TMEM223-202ENST00000525631 SNAPC4Q5SXM2 1469 aa24.5■■□□□ 1.51
TMEM223-202ENST00000525631 MAGI1Q96QZ7 1491 aaPredicted RBP24.49■■□□□ 1.51
TMEM223-202ENST00000525631 FBLN2P98095 1184 aa24.48■■□□□ 1.51
TMEM223-202ENST00000525631 CHMP7Q8WUX9 453 aaPredicted RBP24.41■■□□□ 1.5
TMEM223-202ENST00000525631 SYNJ2O15056 1496 aa24.38■■□□□ 1.49
TMEM223-202ENST00000525631 ERICH3Q5RHP9 1530 aa24.35■■□□□ 1.49
TMEM223-202ENST00000525631 ADAMTS12P58397 1594 aa24.29■■□□□ 1.48
TMEM223-202ENST00000525631 KIF27Q86VH2 1401 aa24.28■■□□□ 1.48
TMEM223-202ENST00000525631 FHAD1B1AJZ9 1412 aa24.27■■□□□ 1.48
TMEM223-202ENST00000525631 GRIN2AQ12879 1464 aa24.22■■□□□ 1.47
TMEM223-202ENST00000525631 TRIM41Q8WV44 630 aa24.22■■□□□ 1.47
TMEM223-202ENST00000525631 RIMBP3CA6NJZ7 1639 aa24.18■■□□□ 1.46
TMEM223-202ENST00000525631 RIMBP3BA6NNM3 1639 aa24.18■■□□□ 1.46
TMEM223-202ENST00000525631 RIMBP3Q9UFD9 1639 aa24.18■■□□□ 1.46
TMEM223-202ENST00000525631 CLASP1Q7Z460 1538 aa24.18■■□□□ 1.46
TMEM223-202ENST00000525631 ARHGEF11O15085 1522 aa24.15■■□□□ 1.46
TMEM223-202ENST00000525631 CUL7Q14999 1698 aa24.15■■□□□ 1.46
TMEM223-202ENST00000525631 IGF1RP08069 1367 aa24.14■■□□□ 1.45
TMEM223-202ENST00000525631 NUP160Q12769 1436 aa24.1■■□□□ 1.45
TMEM223-202ENST00000525631 CEP170Q5SW79 1584 aa24.08■■□□□ 1.45
TMEM223-202ENST00000525631 CARMIL1Q5VZK9 1371 aa24.03■■□□□ 1.44
TMEM223-202ENST00000525631 RUSC2Q8N2Y8 1516 aa24■■□□□ 1.43
TMEM223-202ENST00000525631 CYB5RLQ6IPT4 315 aa23.95■■□□□ 1.42
TMEM223-202ENST00000525631 ARAP1Q96P48 1450 aa23.94■■□□□ 1.42
TMEM223-202ENST00000525631 SHROOM2Q13796 1616 aa23.93■■□□□ 1.42
TMEM223-202ENST00000525631 RAPGEF2Q9Y4G8 1499 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms