RNA–Protein interactions for RNA: ENST00000449999.1

FGFR3P1-201, Transcript of fibroblast growth factor receptor 3 pseudogene 1, humanhuman

BASIC

Gene FGFR3P1, Length 601 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3P1-201ENST00000449999 NISCHQ9Y2I1 1504 aa35.32■■■■□ 3.25
FGFR3P1-201ENST00000449999 ABCC9O60706 1549 aa31.77■■■□□ 2.68
FGFR3P1-201ENST00000449999 CCDC180Q9P1Z9 1646 aa31.69■■■□□ 2.66
FGFR3P1-201ENST00000449999 RB1CC1Q8TDY2 1594 aa30.16■■■□□ 2.42
FGFR3P1-201ENST00000449999 NACADO15069 1562 aa29.93■■■□□ 2.38
FGFR3P1-201ENST00000449999 DCAF8L2P0C7V8 631 aa29.9■■■□□ 2.38
FGFR3P1-201ENST00000449999 DNAJC5BQ9UF47 199 aa29.77■■■□□ 2.36
FGFR3P1-201ENST00000449999 PABPN1Q86U42 306 aaKnown RBP eCLIP29.59■■■□□ 2.33
FGFR3P1-201ENST00000449999 UNC13AQ9UPW8 1703 aa29.55■■■□□ 2.32
FGFR3P1-201ENST00000449999 MYO15BQ96JP2 1530 aa29.45■■■□□ 2.31
FGFR3P1-201ENST00000449999 BICRAQ9NZM4 1560 aa29.32■■■□□ 2.28
FGFR3P1-201ENST00000449999 ZCCHC6Q5VYS8 1495 aaKnown RBP29.29■■■□□ 2.28
FGFR3P1-201ENST00000449999 DCAF1Q9Y4B6 1507 aa29.1■■■□□ 2.25
FGFR3P1-201ENST00000449999 SCRIBQ14160 1630 aa28.99■■■□□ 2.23
FGFR3P1-201ENST00000449999 SHROOM4Q9ULL8 1493 aa28.81■■■□□ 2.2
FGFR3P1-201ENST00000449999 CC2D2AQ9P2K1 1620 aa28.67■■■□□ 2.18
FGFR3P1-201ENST00000449999 EIF4G1Q04637 1599 aaKnown RBP28.6■■■□□ 2.17
FGFR3P1-201ENST00000449999 CECR2Q9BXF3 1484 aa28.58■■■□□ 2.17
FGFR3P1-201ENST00000449999 NCAPD3P42695 1498 aa27.62■■■□□ 2.01
FGFR3P1-201ENST00000449999 SMARCA4P51532 1647 aa27.59■■■□□ 2.01
FGFR3P1-201ENST00000449999 ATAD2BQ9ULI0 1458 aa27.57■■■□□ 2
FGFR3P1-201ENST00000449999 SMARCA2P51531 1590 aa27.49■■□□□ 1.99
FGFR3P1-201ENST00000449999 HMGXB3Q12766 1538 aa27.44■■□□□ 1.98
FGFR3P1-201ENST00000449999 BAZ1AQ9NRL2 1556 aaPredicted RBP27.42■■□□□ 1.98
FGFR3P1-201ENST00000449999 ERCC6Q03468 1493 aa27.41■■□□□ 1.98
FGFR3P1-201ENST00000449999 BAZ1BQ9UIG0 1483 aaKnown RBP27.34■■□□□ 1.97
FGFR3P1-201ENST00000449999 NESP48681 1621 aa27.3■■□□□ 1.96
FGFR3P1-201ENST00000449999 CUX2O14529 1486 aa27.28■■□□□ 1.96
FGFR3P1-201ENST00000449999 MROH2BQ7Z745 1585 aa27.27■■□□□ 1.96
FGFR3P1-201ENST00000449999 PEG3Q9GZU2 1588 aa27.25■■□□□ 1.95
FGFR3P1-201ENST00000449999 DNAJC5Q9H3Z4 198 aa27.24■■□□□ 1.95
FGFR3P1-201ENST00000449999 LAMC3Q9Y6N6 1575 aa27.02■■□□□ 1.92
FGFR3P1-201ENST00000449999 THOC2Q8NI27 1593 aaKnown RBP27■■□□□ 1.91
FGFR3P1-201ENST00000449999 WIZO95785 1651 aa26.97■■□□□ 1.91
FGFR3P1-201ENST00000449999 KIF21AQ7Z4S6 1674 aa26.95■■□□□ 1.91
FGFR3P1-201ENST00000449999 PDS5BQ9NTI5 1447 aa26.85■■□□□ 1.89
FGFR3P1-201ENST00000449999 CADPSQ9ULU8 1353 aa26.8■■□□□ 1.88
FGFR3P1-201ENST00000449999 MRC2Q9UBG0 1479 aa26.68■■□□□ 1.86
FGFR3P1-201ENST00000449999 RSF1Q96T23 1441 aaPredicted RBP26.67■■□□□ 1.86
FGFR3P1-201ENST00000449999 WDR62O43379 1518 aa26.6■■□□□ 1.85
FGFR3P1-201ENST00000449999 TOP2AP11388 1531 aaKnown RBP26.59■■□□□ 1.85
FGFR3P1-201ENST00000449999 CEP164Q9UPV0 1460 aa26.57■■□□□ 1.84
FGFR3P1-201ENST00000449999 FANCD2Q9BXW9 1451 aa26.55■■□□□ 1.84
FGFR3P1-201ENST00000449999 CFTRP13569 1480 aa26.49■■□□□ 1.83
FGFR3P1-201ENST00000449999 URB2Q14146 1524 aaKnown RBP26.34■■□□□ 1.81
FGFR3P1-201ENST00000449999 CCDC88BA6NC98 1476 aa26.28■■□□□ 1.8
FGFR3P1-201ENST00000449999 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
FGFR3P1-201ENST00000449999 TRIM41Q8WV44 630 aa26.18■■□□□ 1.78
FGFR3P1-201ENST00000449999 TOPBP1Q92547 1522 aa26.04■■□□□ 1.76
FGFR3P1-201ENST00000449999 ZNF608Q9ULD9 1512 aaPredicted RBP26.04■■□□□ 1.76
FGFR3P1-201ENST00000449999 OSCARQ8IYS5 282 aa26.03■■□□□ 1.76
FGFR3P1-201ENST00000449999 IFT140Q96RY7 1462 aa26.01■■□□□ 1.75
FGFR3P1-201ENST00000449999 DNMBPQ6XZF7 1577 aa25.95■■□□□ 1.74
FGFR3P1-201ENST00000449999 EIF4G3O43432 1585 aaKnown RBP25.9■■□□□ 1.74
FGFR3P1-201ENST00000449999 ABCC8Q09428 1581 aa25.9■■□□□ 1.74
FGFR3P1-201ENST00000449999 TARBP1Q13395 1621 aaKnown RBP25.81■■□□□ 1.72
FGFR3P1-201ENST00000449999 AQRO60306 1485 aaKnown RBP eCLIP25.79■■□□□ 1.72
FGFR3P1-201ENST00000449999 RIMBP3CA6NJZ7 1639 aa25.78■■□□□ 1.72
FGFR3P1-201ENST00000449999 RIMBP3BA6NNM3 1639 aa25.78■■□□□ 1.72
FGFR3P1-201ENST00000449999 RIMBP3Q9UFD9 1639 aa25.78■■□□□ 1.72
FGFR3P1-201ENST00000449999 POLA1P09884 1462 aaPredicted RBP25.78■■□□□ 1.72
FGFR3P1-201ENST00000449999 RAD54L2Q9Y4B4 1467 aa25.72■■□□□ 1.71
FGFR3P1-201ENST00000449999 CHD1O14646 1710 aa25.71■■□□□ 1.71
FGFR3P1-201ENST00000449999 ARHGEF11O15085 1522 aa25.68■■□□□ 1.7
FGFR3P1-201ENST00000449999 FGD5Q6ZNL6 1462 aa25.65■■□□□ 1.7
FGFR3P1-201ENST00000449999 SOGA1O94964 1423 aa25.64■■□□□ 1.7
FGFR3P1-201ENST00000449999 FBLN2P98095 1184 aa25.64■■□□□ 1.7
FGFR3P1-201ENST00000449999 TDRD9Q8NDG6 1382 aaKnown RBP25.63■■□□□ 1.69
FGFR3P1-201ENST00000449999 CUX1P39880 1505 aa25.63■■□□□ 1.69
FGFR3P1-201ENST00000449999 SUPT5HO00267 1087 aaKnown RBP25.58■■□□□ 1.69
FGFR3P1-201ENST00000449999 SNAPC4Q5SXM2 1469 aa25.54■■□□□ 1.68
FGFR3P1-201ENST00000449999 CYB5RLQ6IPT4 315 aa25.48■■□□□ 1.67
FGFR3P1-201ENST00000449999 WDR97A6NE52 1622 aa25.47■■□□□ 1.67
FGFR3P1-201ENST00000449999 ARAP1Q96P48 1450 aa25.44■■□□□ 1.66
FGFR3P1-201ENST00000449999 GRIN2BQ13224 1484 aa25.41■■□□□ 1.66
FGFR3P1-201ENST00000449999 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
FGFR3P1-201ENST00000449999 CHMP7Q8WUX9 453 aaPredicted RBP25.39■■□□□ 1.66
FGFR3P1-201ENST00000449999 PBRM1Q86U86 1689 aa25.38■■□□□ 1.65
FGFR3P1-201ENST00000449999 CLASP1Q7Z460 1538 aa25.37■■□□□ 1.65
FGFR3P1-201ENST00000449999 SYNJ1O43426 1573 aa25.35■■□□□ 1.65
FGFR3P1-201ENST00000449999 SYNJ2O15056 1496 aa25.34■■□□□ 1.65
FGFR3P1-201ENST00000449999 GAPVD1Q14C86 1478 aa25.34■■□□□ 1.65
FGFR3P1-201ENST00000449999 ABCA10Q8WWZ4 1543 aa25.3■■□□□ 1.64
FGFR3P1-201ENST00000449999 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
FGFR3P1-201ENST00000449999 TRHP20396 242 aaPredicted RBP25.23■■□□□ 1.63
FGFR3P1-201ENST00000449999 WRNQ14191 1432 aaPredicted RBP eCLIP25.2■■□□□ 1.62
FGFR3P1-201ENST00000449999 BIVM-ERCC5R4GMW8 1640 aa25.19■■□□□ 1.62
FGFR3P1-201ENST00000449999 TOP2BQ02880 1626 aa25.19■■□□□ 1.62
FGFR3P1-201ENST00000449999 ADAMTS12P58397 1594 aa25.13■■□□□ 1.61
FGFR3P1-201ENST00000449999 GRIN2AQ12879 1464 aa25.11■■□□□ 1.61
FGFR3P1-201ENST00000449999 CEP170Q5SW79 1584 aa25.06■■□□□ 1.6
FGFR3P1-201ENST00000449999 ERCC6L2Q5T890 1561 aa25.05■■□□□ 1.6
FGFR3P1-201ENST00000449999 FHAD1B1AJZ9 1412 aa25■■□□□ 1.59
FGFR3P1-201ENST00000449999 NUP160Q12769 1436 aa24.99■■□□□ 1.59
FGFR3P1-201ENST00000449999 ERICH3Q5RHP9 1530 aa24.96■■□□□ 1.59
FGFR3P1-201ENST00000449999 SHROOM2Q13796 1616 aa24.9■■□□□ 1.58
FGFR3P1-201ENST00000449999 PRG4Q92954 1404 aaPredicted RBP24.79■■□□□ 1.56
FGFR3P1-201ENST00000449999 RUSC2Q8N2Y8 1516 aa24.78■■□□□ 1.56
FGFR3P1-201ENST00000449999 JPH4Q96JJ6 628 aa24.73■■□□□ 1.55
FGFR3P1-201ENST00000449999 KIF27Q86VH2 1401 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms