RNA–Protein interactions for RNA: ENST00000458100.6

CTNND2-202, Transcript of catenin delta 2, humanhuman

TSL 5 BASIC

Gene CTNND2, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-202ENST00000458100 NISCHQ9Y2I1 1504 aa32.85■■■□□ 2.85
CTNND2-202ENST00000458100 CCDC180Q9P1Z9 1646 aa28.64■■■□□ 2.18
CTNND2-202ENST00000458100 ZCCHC6Q5VYS8 1495 aaKnown RBP27.63■■■□□ 2.01
CTNND2-202ENST00000458100 DCAF1Q9Y4B6 1507 aa27.19■■□□□ 1.94
CTNND2-202ENST00000458100 DCAF8L2P0C7V8 631 aa27.06■■□□□ 1.92
CTNND2-202ENST00000458100 ABCC9O60706 1549 aa26.91■■□□□ 1.9
CTNND2-202ENST00000458100 SHROOM4Q9ULL8 1493 aa26.84■■□□□ 1.89
CTNND2-202ENST00000458100 MYO15BQ96JP2 1530 aa26.83■■□□□ 1.88
CTNND2-202ENST00000458100 NACADO15069 1562 aa26.63■■□□□ 1.85
CTNND2-202ENST00000458100 RB1CC1Q8TDY2 1594 aa26.38■■□□□ 1.81
CTNND2-202ENST00000458100 SCRIBQ14160 1630 aa26.31■■□□□ 1.8
CTNND2-202ENST00000458100 SUPT5HO00267 1087 aaKnown RBP25.89■■□□□ 1.74
CTNND2-202ENST00000458100 UNC13AQ9UPW8 1703 aa25.87■■□□□ 1.73
CTNND2-202ENST00000458100 BICRAQ9NZM4 1560 aa25.54■■□□□ 1.68
CTNND2-202ENST00000458100 RSF1Q96T23 1441 aaPredicted RBP25.51■■□□□ 1.67
CTNND2-202ENST00000458100 CECR2Q9BXF3 1484 aa25.49■■□□□ 1.67
CTNND2-202ENST00000458100 BAZ1AQ9NRL2 1556 aaPredicted RBP25.38■■□□□ 1.65
CTNND2-202ENST00000458100 MROH2BQ7Z745 1585 aa25.37■■□□□ 1.65
CTNND2-202ENST00000458100 PABPN1Q86U42 306 aaKnown RBP eCLIP25.36■■□□□ 1.65
CTNND2-202ENST00000458100 SMARCA4P51532 1647 aa25.25■■□□□ 1.63
CTNND2-202ENST00000458100 WIZO95785 1651 aa25.19■■□□□ 1.62
CTNND2-202ENST00000458100 TOP2AP11388 1531 aaKnown RBP24.94■■□□□ 1.58
CTNND2-202ENST00000458100 PEG3Q9GZU2 1588 aa24.94■■□□□ 1.58
CTNND2-202ENST00000458100 CHIC1Q5VXU3 224 aa24.85■■□□□ 1.57
CTNND2-202ENST00000458100 SMARCA2P51531 1590 aa24.8■■□□□ 1.56
CTNND2-202ENST00000458100 EIF4G1Q04637 1599 aaKnown RBP24.78■■□□□ 1.56
CTNND2-202ENST00000458100 ATAD2BQ9ULI0 1458 aa24.77■■□□□ 1.56
CTNND2-202ENST00000458100 CCDC88BA6NC98 1476 aa24.66■■□□□ 1.54
CTNND2-202ENST00000458100 BAZ1BQ9UIG0 1483 aaKnown RBP24.66■■□□□ 1.54
CTNND2-202ENST00000458100 HMGXB3Q12766 1538 aa24.55■■□□□ 1.52
CTNND2-202ENST00000458100 NCAPD3P42695 1498 aa24.55■■□□□ 1.52
CTNND2-202ENST00000458100 CC2D2AQ9P2K1 1620 aa24.38■■□□□ 1.49
CTNND2-202ENST00000458100 TRIM41Q8WV44 630 aa24.36■■□□□ 1.49
CTNND2-202ENST00000458100 ABCC8Q09428 1581 aa24.19■■□□□ 1.46
CTNND2-202ENST00000458100 CFTRP13569 1480 aa24.04■■□□□ 1.44
CTNND2-202ENST00000458100 WRNQ14191 1432 aaPredicted RBP eCLIP24.03■■□□□ 1.44
CTNND2-202ENST00000458100 PRDM2Q13029 1718 aa24.01■■□□□ 1.43
CTNND2-202ENST00000458100 SYNJ1O43426 1573 aa23.92■■□□□ 1.42
CTNND2-202ENST00000458100 CADPSQ9ULU8 1353 aa23.92■■□□□ 1.42
CTNND2-202ENST00000458100 LOC105371045A0A1W2PR82 267 aa23.89■■□□□ 1.41
CTNND2-202ENST00000458100 FAM9AQ8IZU1 332 aaPredicted RBP23.89■■□□□ 1.41
CTNND2-202ENST00000458100 TOP2BQ02880 1626 aa23.84■■□□□ 1.41
CTNND2-202ENST00000458100 BIVM-ERCC5R4GMW8 1640 aa23.83■■□□□ 1.41
CTNND2-202ENST00000458100 EEA1Q15075 1411 aa23.78■■□□□ 1.4
CTNND2-202ENST00000458100 SOGA1O94964 1423 aa23.74■■□□□ 1.39
CTNND2-202ENST00000458100 LAMC3Q9Y6N6 1575 aa23.73■■□□□ 1.39
CTNND2-202ENST00000458100 CUX1P39880 1505 aa23.72■■□□□ 1.39
CTNND2-202ENST00000458100 FANCD2Q9BXW9 1451 aa23.67■■□□□ 1.38
CTNND2-202ENST00000458100 NESP48681 1621 aa23.65■■□□□ 1.38
CTNND2-202ENST00000458100 RUSC2Q8N2Y8 1516 aa23.64■■□□□ 1.37
CTNND2-202ENST00000458100 DNAJC5BQ9UF47 199 aa23.62■■□□□ 1.37
CTNND2-202ENST00000458100 CSRNP3Q8WYN3 585 aa23.6■■□□□ 1.37
CTNND2-202ENST00000458100 PDS5BQ9NTI5 1447 aa23.53■■□□□ 1.36
CTNND2-202ENST00000458100 EHMT2Q96KQ7 1210 aa23.52■■□□□ 1.36
CTNND2-202ENST00000458100 CEP164Q9UPV0 1460 aa23.52■■□□□ 1.36
CTNND2-202ENST00000458100 DNMBPQ6XZF7 1577 aa23.5■■□□□ 1.35
CTNND2-202ENST00000458100 KIF21BO75037 1637 aa23.47■■□□□ 1.35
CTNND2-202ENST00000458100 GOLGA3Q08378 1498 aa23.45■■□□□ 1.34
CTNND2-202ENST00000458100 FGD5Q6ZNL6 1462 aa23.45■■□□□ 1.34
CTNND2-202ENST00000458100 KIF21AQ7Z4S6 1674 aa23.43■■□□□ 1.34
CTNND2-202ENST00000458100 TOPBP1Q92547 1522 aa23.42■■□□□ 1.34
CTNND2-202ENST00000458100 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
CTNND2-202ENST00000458100 TNIKQ9UKE5 1360 aa23.38■■□□□ 1.33
CTNND2-202ENST00000458100 URB2Q14146 1524 aaKnown RBP23.35■■□□□ 1.33
CTNND2-202ENST00000458100 POLA1P09884 1462 aaPredicted RBP23.32■■□□□ 1.32
CTNND2-202ENST00000458100 CUX2O14529 1486 aa23.31■■□□□ 1.32
CTNND2-202ENST00000458100 UBTFP17480 764 aaKnown RBP23.31■■□□□ 1.32
CTNND2-202ENST00000458100 ERICH3Q5RHP9 1530 aa23.29■■□□□ 1.32
CTNND2-202ENST00000458100 PRXQ9BXM0 1461 aa23.28■■□□□ 1.32
CTNND2-202ENST00000458100 RAPGEF2Q9Y4G8 1499 aa23.26■■□□□ 1.31
CTNND2-202ENST00000458100 CEP162Q5TB80 1403 aa23.26■■□□□ 1.31
CTNND2-202ENST00000458100 ABCA10Q8WWZ4 1543 aa23.26■■□□□ 1.31
CTNND2-202ENST00000458100 RAD54L2Q9Y4B4 1467 aa23.22■■□□□ 1.31
CTNND2-202ENST00000458100 MRC2Q9UBG0 1479 aa23.2■■□□□ 1.3
CTNND2-202ENST00000458100 WDR97A6NE52 1622 aa23.19■■□□□ 1.3
CTNND2-202ENST00000458100 IGF1RP08069 1367 aa23.17■■□□□ 1.3
CTNND2-202ENST00000458100 ERCC6Q03468 1493 aa23.09■■□□□ 1.29
CTNND2-202ENST00000458100 WDR62O43379 1518 aa23.08■■□□□ 1.29
CTNND2-202ENST00000458100 TARBP1Q13395 1621 aaKnown RBP23.08■■□□□ 1.28
CTNND2-202ENST00000458100 CARMIL1Q5VZK9 1371 aa23.07■■□□□ 1.28
CTNND2-202ENST00000458100 ABCA5Q8WWZ7 1642 aa23.07■■□□□ 1.28
CTNND2-202ENST00000458100 CLIP1P30622 1438 aa23.06■■□□□ 1.28
CTNND2-202ENST00000458100 CUL7Q14999 1698 aa23.05■■□□□ 1.28
CTNND2-202ENST00000458100 GAPVD1Q14C86 1478 aa23■■□□□ 1.27
CTNND2-202ENST00000458100 THOC2Q8NI27 1593 aaKnown RBP22.99■■□□□ 1.27
CTNND2-202ENST00000458100 TDRD9Q8NDG6 1382 aaKnown RBP22.98■■□□□ 1.27
CTNND2-202ENST00000458100 TRIM26Q12899 539 aaPredicted RBP22.95■■□□□ 1.26
CTNND2-202ENST00000458100 PCGF6Q9BYE7 350 aa22.95■■□□□ 1.26
CTNND2-202ENST00000458100 IFT140Q96RY7 1462 aa22.95■■□□□ 1.26
CTNND2-202ENST00000458100 PBRM1Q86U86 1689 aa22.9■■□□□ 1.26
CTNND2-202ENST00000458100 VPS8Q8N3P4 1428 aa22.88■■□□□ 1.25
CTNND2-202ENST00000458100 RANGAP1P46060 587 aaPredicted RBP22.86■■□□□ 1.25
CTNND2-202ENST00000458100 CTTNBP2Q8WZ74 1663 aa22.83■■□□□ 1.25
CTNND2-202ENST00000458100 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.24
CTNND2-202ENST00000458100 GRIN2BQ13224 1484 aa22.81■■□□□ 1.24
CTNND2-202ENST00000458100 ARAP1Q96P48 1450 aa22.8■■□□□ 1.24
CTNND2-202ENST00000458100 ARHGAP35Q9NRY4 1499 aa22.78■■□□□ 1.24
CTNND2-202ENST00000458100 ZNF608Q9ULD9 1512 aaPredicted RBP22.78■■□□□ 1.24
CTNND2-202ENST00000458100 EIF4G3O43432 1585 aaKnown RBP22.75■■□□□ 1.23
CTNND2-202ENST00000458100 ADAMTS12P58397 1594 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms