Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 HIST2H2BB-201ENST00000449108 381 ntBASIC13.58□□□□□ -0.24
PSMD4P55036 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.58□□□□□ -0.24
PSMD4P55036 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 RNA5SP412-201ENST00000516234 123 ntBASIC13.58□□□□□ -0.24
PSMD4P55036 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.58□□□□□ -0.24
PSMD4P55036 SNX29P1-201ENST00000548357 1007 ntBASIC13.58□□□□□ -0.24
PSMD4P55036 SORD2P-201ENST00000558556 1069 ntBASIC13.58□□□□□ -0.24
PSMD4P55036 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.58□□□□□ -0.24
PSMD4P55036 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.58□□□□□ -0.24
PSMD4P55036 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.58□□□□□ -0.24
PSMD4P55036 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 EEF1DP1-201ENST00000585891 896 ntBASIC13.58□□□□□ -0.24
PSMD4P55036 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.58□□□□□ -0.24
PSMD4P55036 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.58□□□□□ -0.24
PSMD4P55036 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.58□□□□□ -0.24
PSMD4P55036 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
PSMD4P55036 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.58□□□□□ -0.24
PSMD4P55036 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
PSMD4P55036 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.58□□□□□ -0.24
PSMD4P55036 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.58□□□□□ -0.24
PSMD4P55036 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.58□□□□□ -0.24
PSMD4P55036 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
PSMD4P55036 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.58□□□□□ -0.24
PSMD4P55036 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PSMD4P55036 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.57□□□□□ -0.24
PSMD4P55036 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
PSMD4P55036 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.57□□□□□ -0.24
PSMD4P55036 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
PSMD4P55036 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.57□□□□□ -0.24
PSMD4P55036 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
PSMD4P55036 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.57□□□□□ -0.24
PSMD4P55036 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
PSMD4P55036 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.57□□□□□ -0.24
PSMD4P55036 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
PSMD4P55036 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
PSMD4P55036 MIR326-201ENST00000362220 95 ntBASIC13.57□□□□□ -0.24
PSMD4P55036 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.57□□□□□ -0.24
PSMD4P55036 GK-202ENST00000378941 458 ntTSL 3 BASIC13.57□□□□□ -0.24
PSMD4P55036 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.57□□□□□ -0.24
PSMD4P55036 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
PSMD4P55036 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.57□□□□□ -0.24
PSMD4P55036 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.57□□□□□ -0.24
PSMD4P55036 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PSMD4P55036 AC099336.1-201ENST00000417053 1171 ntBASIC13.57□□□□□ -0.24
PSMD4P55036 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.57□□□□□ -0.24
PSMD4P55036 CICP12-201ENST00000455801 843 ntBASIC13.57□□□□□ -0.24
PSMD4P55036 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.57□□□□□ -0.24
PSMD4P55036 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.57□□□□□ -0.24
PSMD4P55036 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.57□□□□□ -0.24
PSMD4P55036 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
PSMD4P55036 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 AC027237.1-201ENST00000560942 655 ntBASIC13.57□□□□□ -0.24
PSMD4P55036 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.57□□□□□ -0.24
PSMD4P55036 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.57□□□□□ -0.24
PSMD4P55036 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.57□□□□□ -0.24
PSMD4P55036 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.57□□□□□ -0.24
PSMD4P55036 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
PSMD4P55036 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
PSMD4P55036 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
PSMD4P55036 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.57□□□□□ -0.24
PSMD4P55036 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
PSMD4P55036 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms