RNA–Protein interactions for RNA: ENST00000560853.5

LINC00593-202, long intergenic non-protein coding RNA 593, humanhuman

TSL 1 (best) BASIC

Gene LINC00593, Length 1,483 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00593-202ENST00000560853 NISCHQ9Y2I1 1504 aa37.12■■■■□ 3.53
LINC00593-202ENST00000560853 CCDC180Q9P1Z9 1646 aa33.17■■■□□ 2.9
LINC00593-202ENST00000560853 ABCC9O60706 1549 aa32.96■■■□□ 2.87
LINC00593-202ENST00000560853 RB1CC1Q8TDY2 1594 aa31.45■■■□□ 2.63
LINC00593-202ENST00000560853 NACADO15069 1562 aa31.3■■■□□ 2.6
LINC00593-202ENST00000560853 DCAF8L2P0C7V8 631 aa31.3■■■□□ 2.6
LINC00593-202ENST00000560853 MYO15BQ96JP2 1530 aa30.92■■■□□ 2.54
LINC00593-202ENST00000560853 ZCCHC6Q5VYS8 1495 aaKnown RBP30.81■■■□□ 2.52
LINC00593-202ENST00000560853 PABPN1Q86U42 306 aaKnown RBP eCLIP30.76■■■□□ 2.51
LINC00593-202ENST00000560853 UNC13AQ9UPW8 1703 aa30.75■■■□□ 2.51
LINC00593-202ENST00000560853 DNAJC5BQ9UF47 199 aa30.67■■■□□ 2.5
LINC00593-202ENST00000560853 DCAF1Q9Y4B6 1507 aa30.64■■■□□ 2.5
LINC00593-202ENST00000560853 BICRAQ9NZM4 1560 aa30.52■■■□□ 2.48
LINC00593-202ENST00000560853 SCRIBQ14160 1630 aa30.3■■■□□ 2.44
LINC00593-202ENST00000560853 SHROOM4Q9ULL8 1493 aa30.1■■■□□ 2.41
LINC00593-202ENST00000560853 EIF4G1Q04637 1599 aaKnown RBP29.77■■■□□ 2.36
LINC00593-202ENST00000560853 CC2D2AQ9P2K1 1620 aa29.77■■■□□ 2.36
LINC00593-202ENST00000560853 CECR2Q9BXF3 1484 aa29.65■■■□□ 2.34
LINC00593-202ENST00000560853 SMARCA4P51532 1647 aa28.9■■■□□ 2.22
LINC00593-202ENST00000560853 NCAPD3P42695 1498 aa28.89■■■□□ 2.22
LINC00593-202ENST00000560853 ATAD2BQ9ULI0 1458 aa28.86■■■□□ 2.21
LINC00593-202ENST00000560853 SMARCA2P51531 1590 aa28.79■■■□□ 2.2
LINC00593-202ENST00000560853 BAZ1AQ9NRL2 1556 aaPredicted RBP28.79■■■□□ 2.2
LINC00593-202ENST00000560853 HMGXB3Q12766 1538 aa28.7■■■□□ 2.18
LINC00593-202ENST00000560853 MROH2BQ7Z745 1585 aa28.61■■■□□ 2.17
LINC00593-202ENST00000560853 BAZ1BQ9UIG0 1483 aaKnown RBP28.61■■■□□ 2.17
LINC00593-202ENST00000560853 PEG3Q9GZU2 1588 aa28.59■■■□□ 2.17
LINC00593-202ENST00000560853 ERCC6Q03468 1493 aa28.45■■■□□ 2.14
LINC00593-202ENST00000560853 NESP48681 1621 aa28.39■■■□□ 2.14
LINC00593-202ENST00000560853 WIZO95785 1651 aa28.29■■■□□ 2.12
LINC00593-202ENST00000560853 CUX2O14529 1486 aa28.25■■■□□ 2.11
LINC00593-202ENST00000560853 LAMC3Q9Y6N6 1575 aa28.2■■■□□ 2.1
LINC00593-202ENST00000560853 RSF1Q96T23 1441 aaPredicted RBP28.12■■■□□ 2.09
LINC00593-202ENST00000560853 PDS5BQ9NTI5 1447 aa28.05■■■□□ 2.08
LINC00593-202ENST00000560853 CADPSQ9ULU8 1353 aa28.05■■■□□ 2.08
LINC00593-202ENST00000560853 KIF21AQ7Z4S6 1674 aa28.02■■■□□ 2.08
LINC00593-202ENST00000560853 THOC2Q8NI27 1593 aaKnown RBP28.02■■■□□ 2.08
LINC00593-202ENST00000560853 DNAJC5Q9H3Z4 198 aa27.95■■■□□ 2.06
LINC00593-202ENST00000560853 TOP2AP11388 1531 aaKnown RBP27.94■■■□□ 2.06
LINC00593-202ENST00000560853 MRC2Q9UBG0 1479 aa27.79■■■□□ 2.04
LINC00593-202ENST00000560853 CFTRP13569 1480 aa27.77■■■□□ 2.04
LINC00593-202ENST00000560853 CEP164Q9UPV0 1460 aa27.74■■■□□ 2.03
LINC00593-202ENST00000560853 FANCD2Q9BXW9 1451 aa27.74■■■□□ 2.03
LINC00593-202ENST00000560853 WDR62O43379 1518 aa27.7■■■□□ 2.03
LINC00593-202ENST00000560853 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.02
LINC00593-202ENST00000560853 PRDM2Q13029 1718 aa27.52■■■□□ 2
LINC00593-202ENST00000560853 URB2Q14146 1524 aaKnown RBP27.48■■□□□ 1.99
LINC00593-202ENST00000560853 TOPBP1Q92547 1522 aa27.24■■□□□ 1.95
LINC00593-202ENST00000560853 ABCC8Q09428 1581 aa27.18■■□□□ 1.94
LINC00593-202ENST00000560853 IFT140Q96RY7 1462 aa27.17■■□□□ 1.94
LINC00593-202ENST00000560853 SUPT5HO00267 1087 aaKnown RBP27.16■■□□□ 1.94
LINC00593-202ENST00000560853 DNMBPQ6XZF7 1577 aa27.16■■□□□ 1.94
LINC00593-202ENST00000560853 ZNF608Q9ULD9 1512 aaPredicted RBP27.12■■□□□ 1.93
LINC00593-202ENST00000560853 OSCARQ8IYS5 282 aa27.04■■□□□ 1.92
LINC00593-202ENST00000560853 POLA1P09884 1462 aaPredicted RBP26.98■■□□□ 1.91
LINC00593-202ENST00000560853 EIF4G3O43432 1585 aaKnown RBP26.97■■□□□ 1.91
LINC00593-202ENST00000560853 TARBP1Q13395 1621 aaKnown RBP26.96■■□□□ 1.91
LINC00593-202ENST00000560853 AQRO60306 1485 aaKnown RBP eCLIP26.91■■□□□ 1.9
LINC00593-202ENST00000560853 TRIM41Q8WV44 630 aa26.9■■□□□ 1.9
LINC00593-202ENST00000560853 RAD54L2Q9Y4B4 1467 aa26.9■■□□□ 1.9
LINC00593-202ENST00000560853 SOGA1O94964 1423 aa26.88■■□□□ 1.89
LINC00593-202ENST00000560853 CUX1P39880 1505 aa26.87■■□□□ 1.89
LINC00593-202ENST00000560853 FGD5Q6ZNL6 1462 aa26.85■■□□□ 1.89
LINC00593-202ENST00000560853 TDRD9Q8NDG6 1382 aaKnown RBP26.8■■□□□ 1.88
LINC00593-202ENST00000560853 CHD1O14646 1710 aa26.72■■□□□ 1.87
LINC00593-202ENST00000560853 FBLN2P98095 1184 aa26.72■■□□□ 1.87
LINC00593-202ENST00000560853 WDR97A6NE52 1622 aa26.68■■□□□ 1.86
LINC00593-202ENST00000560853 RIMBP3CA6NJZ7 1639 aa26.65■■□□□ 1.86
LINC00593-202ENST00000560853 RIMBP3BA6NNM3 1639 aa26.65■■□□□ 1.86
LINC00593-202ENST00000560853 RIMBP3Q9UFD9 1639 aa26.65■■□□□ 1.86
LINC00593-202ENST00000560853 SNAPC4Q5SXM2 1469 aa26.64■■□□□ 1.85
LINC00593-202ENST00000560853 ARHGEF11O15085 1522 aa26.6■■□□□ 1.85
LINC00593-202ENST00000560853 GRIN2BQ13224 1484 aa26.59■■□□□ 1.85
LINC00593-202ENST00000560853 MAGI1Q96QZ7 1491 aaPredicted RBP26.56■■□□□ 1.84
LINC00593-202ENST00000560853 ABCA10Q8WWZ4 1543 aa26.55■■□□□ 1.84
LINC00593-202ENST00000560853 GAPVD1Q14C86 1478 aa26.55■■□□□ 1.84
LINC00593-202ENST00000560853 CHMP7Q8WUX9 453 aaPredicted RBP26.55■■□□□ 1.84
LINC00593-202ENST00000560853 WRNQ14191 1432 aaPredicted RBP eCLIP26.54■■□□□ 1.84
LINC00593-202ENST00000560853 PBRM1Q86U86 1689 aa26.51■■□□□ 1.83
LINC00593-202ENST00000560853 TOP2BQ02880 1626 aa26.5■■□□□ 1.83
LINC00593-202ENST00000560853 BIVM-ERCC5R4GMW8 1640 aa26.5■■□□□ 1.83
LINC00593-202ENST00000560853 SYNJ1O43426 1573 aa26.49■■□□□ 1.83
LINC00593-202ENST00000560853 ABCA5Q8WWZ7 1642 aa26.48■■□□□ 1.83
LINC00593-202ENST00000560853 SYNJ2O15056 1496 aa26.47■■□□□ 1.83
LINC00593-202ENST00000560853 CYB5RLQ6IPT4 315 aa26.42■■□□□ 1.82
LINC00593-202ENST00000560853 CLASP1Q7Z460 1538 aa26.4■■□□□ 1.82
LINC00593-202ENST00000560853 ARAP1Q96P48 1450 aa26.35■■□□□ 1.81
LINC00593-202ENST00000560853 ADAMTS12P58397 1594 aa26.27■■□□□ 1.8
LINC00593-202ENST00000560853 GRIN2AQ12879 1464 aa26.26■■□□□ 1.79
LINC00593-202ENST00000560853 ERICH3Q5RHP9 1530 aa26.22■■□□□ 1.79
LINC00593-202ENST00000560853 FHAD1B1AJZ9 1412 aa26.21■■□□□ 1.79
LINC00593-202ENST00000560853 CEP170Q5SW79 1584 aa26.15■■□□□ 1.78
LINC00593-202ENST00000560853 NUP160Q12769 1436 aa26.14■■□□□ 1.78
LINC00593-202ENST00000560853 TRHP20396 242 aaPredicted RBP26.06■■□□□ 1.76
LINC00593-202ENST00000560853 ERCC6L2Q5T890 1561 aa26.04■■□□□ 1.76
LINC00593-202ENST00000560853 KIF27Q86VH2 1401 aa26.02■■□□□ 1.76
LINC00593-202ENST00000560853 SHROOM2Q13796 1616 aa25.98■■□□□ 1.75
LINC00593-202ENST00000560853 IGF1RP08069 1367 aa25.97■■□□□ 1.75
LINC00593-202ENST00000560853 JPH4Q96JJ6 628 aa25.91■■□□□ 1.74
LINC00593-202ENST00000560853 CUL7Q14999 1698 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms