RNA–Protein interactions for RNA: ENST00000619315.1

LCN9-204, Transcript of lipocalin 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCN9, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN9-204ENST00000619315 NISCHQ9Y2I1 1504 aa36.99■■■■□ 3.51
LCN9-204ENST00000619315 CCDC180Q9P1Z9 1646 aa32.99■■■□□ 2.87
LCN9-204ENST00000619315 ABCC9O60706 1549 aa32.27■■■□□ 2.76
LCN9-204ENST00000619315 RB1CC1Q8TDY2 1594 aa31■■■□□ 2.55
LCN9-204ENST00000619315 NACADO15069 1562 aa30.94■■■□□ 2.54
LCN9-204ENST00000619315 ZCCHC6Q5VYS8 1495 aaKnown RBP30.82■■■□□ 2.53
LCN9-204ENST00000619315 MYO15BQ96JP2 1530 aa30.75■■■□□ 2.51
LCN9-204ENST00000619315 DCAF8L2P0C7V8 631 aa30.69■■■□□ 2.5
LCN9-204ENST00000619315 DCAF1Q9Y4B6 1507 aa30.6■■■□□ 2.49
LCN9-204ENST00000619315 UNC13AQ9UPW8 1703 aa30.52■■■□□ 2.48
LCN9-204ENST00000619315 BICRAQ9NZM4 1560 aa30.22■■■□□ 2.43
LCN9-204ENST00000619315 PABPN1Q86U42 306 aaKnown RBP eCLIP30.08■■■□□ 2.41
LCN9-204ENST00000619315 SCRIBQ14160 1630 aa30.05■■■□□ 2.4
LCN9-204ENST00000619315 DNAJC5BQ9UF47 199 aa29.75■■■□□ 2.35
LCN9-204ENST00000619315 SHROOM4Q9ULL8 1493 aa29.74■■■□□ 2.35
LCN9-204ENST00000619315 EIF4G1Q04637 1599 aaKnown RBP29.35■■■□□ 2.29
LCN9-204ENST00000619315 CC2D2AQ9P2K1 1620 aa29.24■■■□□ 2.27
LCN9-204ENST00000619315 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
LCN9-204ENST00000619315 SMARCA4P51532 1647 aa28.76■■■□□ 2.2
LCN9-204ENST00000619315 BAZ1AQ9NRL2 1556 aaPredicted RBP28.63■■■□□ 2.17
LCN9-204ENST00000619315 ATAD2BQ9ULI0 1458 aa28.58■■■□□ 2.17
LCN9-204ENST00000619315 NCAPD3P42695 1498 aa28.55■■■□□ 2.16
LCN9-204ENST00000619315 MROH2BQ7Z745 1585 aa28.54■■■□□ 2.16
LCN9-204ENST00000619315 SMARCA2P51531 1590 aa28.5■■■□□ 2.15
LCN9-204ENST00000619315 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
LCN9-204ENST00000619315 HMGXB3Q12766 1538 aa28.45■■■□□ 2.15
LCN9-204ENST00000619315 BAZ1BQ9UIG0 1483 aaKnown RBP28.29■■■□□ 2.12
LCN9-204ENST00000619315 WIZO95785 1651 aa28.26■■■□□ 2.11
LCN9-204ENST00000619315 RSF1Q96T23 1441 aaPredicted RBP28.13■■■□□ 2.09
LCN9-204ENST00000619315 NESP48681 1621 aa27.96■■■□□ 2.07
LCN9-204ENST00000619315 TOP2AP11388 1531 aaKnown RBP27.89■■■□□ 2.06
LCN9-204ENST00000619315 LAMC3Q9Y6N6 1575 aa27.83■■■□□ 2.05
LCN9-204ENST00000619315 ERCC6Q03468 1493 aa27.72■■■□□ 2.03
LCN9-204ENST00000619315 KIF21AQ7Z4S6 1674 aa27.71■■■□□ 2.03
LCN9-204ENST00000619315 CADPSQ9ULU8 1353 aa27.67■■■□□ 2.02
LCN9-204ENST00000619315 THOC2Q8NI27 1593 aaKnown RBP27.62■■■□□ 2.01
LCN9-204ENST00000619315 CCDC88BA6NC98 1476 aa27.54■■■□□ 2
LCN9-204ENST00000619315 CFTRP13569 1480 aa27.54■■■□□ 2
LCN9-204ENST00000619315 CUX2O14529 1486 aa27.53■■■□□ 2
LCN9-204ENST00000619315 PDS5BQ9NTI5 1447 aa27.53■■■□□ 2
LCN9-204ENST00000619315 PRDM2Q13029 1718 aa27.47■■□□□ 1.99
LCN9-204ENST00000619315 FANCD2Q9BXW9 1451 aa27.38■■□□□ 1.97
LCN9-204ENST00000619315 MRC2Q9UBG0 1479 aa27.34■■□□□ 1.97
LCN9-204ENST00000619315 CEP164Q9UPV0 1460 aa27.34■■□□□ 1.97
LCN9-204ENST00000619315 WDR62O43379 1518 aa27.32■■□□□ 1.96
LCN9-204ENST00000619315 URB2Q14146 1524 aaKnown RBP27.2■■□□□ 1.94
LCN9-204ENST00000619315 SUPT5HO00267 1087 aaKnown RBP27.18■■□□□ 1.94
LCN9-204ENST00000619315 TOPBP1Q92547 1522 aa26.97■■□□□ 1.91
LCN9-204ENST00000619315 DNMBPQ6XZF7 1577 aa26.95■■□□□ 1.9
LCN9-204ENST00000619315 ABCC8Q09428 1581 aa26.86■■□□□ 1.89
LCN9-204ENST00000619315 CUX1P39880 1505 aa26.78■■□□□ 1.88
LCN9-204ENST00000619315 TARBP1Q13395 1621 aaKnown RBP26.77■■□□□ 1.88
LCN9-204ENST00000619315 IFT140Q96RY7 1462 aa26.76■■□□□ 1.87
LCN9-204ENST00000619315 DNAJC5Q9H3Z4 198 aa26.75■■□□□ 1.87
LCN9-204ENST00000619315 ZNF608Q9ULD9 1512 aaPredicted RBP26.75■■□□□ 1.87
LCN9-204ENST00000619315 POLA1P09884 1462 aaPredicted RBP26.74■■□□□ 1.87
LCN9-204ENST00000619315 EIF4G3O43432 1585 aaKnown RBP26.67■■□□□ 1.86
LCN9-204ENST00000619315 FGD5Q6ZNL6 1462 aa26.66■■□□□ 1.86
LCN9-204ENST00000619315 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
LCN9-204ENST00000619315 WDR97A6NE52 1622 aa26.58■■□□□ 1.85
LCN9-204ENST00000619315 BIVM-ERCC5R4GMW8 1640 aa26.56■■□□□ 1.84
LCN9-204ENST00000619315 SYNJ1O43426 1573 aa26.54■■□□□ 1.84
LCN9-204ENST00000619315 SOGA1O94964 1423 aa26.54■■□□□ 1.84
LCN9-204ENST00000619315 AQRO60306 1485 aaKnown RBP eCLIP26.52■■□□□ 1.84
LCN9-204ENST00000619315 TOP2BQ02880 1626 aa26.51■■□□□ 1.83
LCN9-204ENST00000619315 WRNQ14191 1432 aaPredicted RBP eCLIP26.47■■□□□ 1.83
LCN9-204ENST00000619315 TDRD9Q8NDG6 1382 aaKnown RBP26.43■■□□□ 1.82
LCN9-204ENST00000619315 CHD1O14646 1710 aa26.38■■□□□ 1.81
LCN9-204ENST00000619315 ABCA10Q8WWZ4 1543 aa26.38■■□□□ 1.81
LCN9-204ENST00000619315 ABCA5Q8WWZ7 1642 aa26.37■■□□□ 1.81
LCN9-204ENST00000619315 PBRM1Q86U86 1689 aa26.35■■□□□ 1.81
LCN9-204ENST00000619315 SNAPC4Q5SXM2 1469 aa26.29■■□□□ 1.8
LCN9-204ENST00000619315 GAPVD1Q14C86 1478 aa26.27■■□□□ 1.8
LCN9-204ENST00000619315 GRIN2BQ13224 1484 aa26.26■■□□□ 1.79
LCN9-204ENST00000619315 OSCARQ8IYS5 282 aa26.25■■□□□ 1.79
LCN9-204ENST00000619315 MAGI1Q96QZ7 1491 aaPredicted RBP26.22■■□□□ 1.79
LCN9-204ENST00000619315 SYNJ2O15056 1496 aa26.12■■□□□ 1.77
LCN9-204ENST00000619315 ADAMTS12P58397 1594 aa26.11■■□□□ 1.77
LCN9-204ENST00000619315 ERICH3Q5RHP9 1530 aa26.06■■□□□ 1.76
LCN9-204ENST00000619315 CLASP1Q7Z460 1538 aa26.06■■□□□ 1.76
LCN9-204ENST00000619315 FBLN2P98095 1184 aa26.06■■□□□ 1.76
LCN9-204ENST00000619315 RIMBP3CA6NJZ7 1639 aa26.06■■□□□ 1.76
LCN9-204ENST00000619315 RIMBP3BA6NNM3 1639 aa26.06■■□□□ 1.76
LCN9-204ENST00000619315 RIMBP3Q9UFD9 1639 aa26.06■■□□□ 1.76
LCN9-204ENST00000619315 ARHGEF11O15085 1522 aa26■■□□□ 1.75
LCN9-204ENST00000619315 CHMP7Q8WUX9 453 aaPredicted RBP25.98■■□□□ 1.75
LCN9-204ENST00000619315 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
LCN9-204ENST00000619315 FHAD1B1AJZ9 1412 aa25.94■■□□□ 1.74
LCN9-204ENST00000619315 CEP170Q5SW79 1584 aa25.91■■□□□ 1.74
LCN9-204ENST00000619315 NUP160Q12769 1436 aa25.88■■□□□ 1.73
LCN9-204ENST00000619315 KIF27Q86VH2 1401 aa25.88■■□□□ 1.73
LCN9-204ENST00000619315 IGF1RP08069 1367 aa25.83■■□□□ 1.73
LCN9-204ENST00000619315 CUL7Q14999 1698 aa25.83■■□□□ 1.73
LCN9-204ENST00000619315 ARAP1Q96P48 1450 aa25.81■■□□□ 1.72
LCN9-204ENST00000619315 TRIM41Q8WV44 630 aa25.78■■□□□ 1.72
LCN9-204ENST00000619315 RUSC2Q8N2Y8 1516 aa25.77■■□□□ 1.72
LCN9-204ENST00000619315 SHROOM2Q13796 1616 aa25.77■■□□□ 1.72
LCN9-204ENST00000619315 ERCC6L2Q5T890 1561 aa25.73■■□□□ 1.71
LCN9-204ENST00000619315 CARMIL1Q5VZK9 1371 aa25.64■■□□□ 1.69
LCN9-204ENST00000619315 CYB5RLQ6IPT4 315 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms