RNA–Protein interactions for RNA: ENST00000548082.1

RDH5-204, Transcript of retinol dehydrogenase 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDH5, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH5-204ENST00000548082 NISCHQ9Y2I1 1504 aa35.56■■■■□ 3.28
RDH5-204ENST00000548082 CCDC180Q9P1Z9 1646 aa31.6■■■□□ 2.65
RDH5-204ENST00000548082 ABCC9O60706 1549 aa31.03■■■□□ 2.56
RDH5-204ENST00000548082 RB1CC1Q8TDY2 1594 aa29.79■■■□□ 2.36
RDH5-204ENST00000548082 DCAF8L2P0C7V8 631 aa29.79■■■□□ 2.36
RDH5-204ENST00000548082 NACADO15069 1562 aa29.76■■■□□ 2.35
RDH5-204ENST00000548082 ZCCHC6Q5VYS8 1495 aaKnown RBP29.61■■■□□ 2.33
RDH5-204ENST00000548082 MYO15BQ96JP2 1530 aa29.6■■■□□ 2.33
RDH5-204ENST00000548082 DCAF1Q9Y4B6 1507 aa29.46■■■□□ 2.31
RDH5-204ENST00000548082 UNC13AQ9UPW8 1703 aa29.05■■■□□ 2.24
RDH5-204ENST00000548082 PABPN1Q86U42 306 aaKnown RBP eCLIP29■■■□□ 2.23
RDH5-204ENST00000548082 BICRAQ9NZM4 1560 aa28.83■■■□□ 2.21
RDH5-204ENST00000548082 SCRIBQ14160 1630 aa28.8■■■□□ 2.2
RDH5-204ENST00000548082 DNAJC5BQ9UF47 199 aa28.63■■■□□ 2.17
RDH5-204ENST00000548082 SHROOM4Q9ULL8 1493 aa28.63■■■□□ 2.17
RDH5-204ENST00000548082 EIF4G1Q04637 1599 aaKnown RBP28.11■■■□□ 2.09
RDH5-204ENST00000548082 CC2D2AQ9P2K1 1620 aa28.05■■■□□ 2.08
RDH5-204ENST00000548082 CECR2Q9BXF3 1484 aa27.91■■■□□ 2.06
RDH5-204ENST00000548082 BAZ1AQ9NRL2 1556 aaPredicted RBP27.6■■■□□ 2.01
RDH5-204ENST00000548082 SMARCA4P51532 1647 aa27.56■■■□□ 2
RDH5-204ENST00000548082 SMARCA2P51531 1590 aa27.46■■□□□ 1.99
RDH5-204ENST00000548082 NCAPD3P42695 1498 aa27.45■■□□□ 1.99
RDH5-204ENST00000548082 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
RDH5-204ENST00000548082 MROH2BQ7Z745 1585 aa27.35■■□□□ 1.97
RDH5-204ENST00000548082 PEG3Q9GZU2 1588 aa27.31■■□□□ 1.96
RDH5-204ENST00000548082 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
RDH5-204ENST00000548082 BAZ1BQ9UIG0 1483 aaKnown RBP27.25■■□□□ 1.95
RDH5-204ENST00000548082 RSF1Q96T23 1441 aaPredicted RBP27.09■■□□□ 1.93
RDH5-204ENST00000548082 WIZO95785 1651 aa27.04■■□□□ 1.92
RDH5-204ENST00000548082 TOP2AP11388 1531 aaKnown RBP26.82■■□□□ 1.88
RDH5-204ENST00000548082 ERCC6Q03468 1493 aa26.81■■□□□ 1.88
RDH5-204ENST00000548082 NESP48681 1621 aa26.78■■□□□ 1.88
RDH5-204ENST00000548082 LAMC3Q9Y6N6 1575 aa26.71■■□□□ 1.87
RDH5-204ENST00000548082 CADPSQ9ULU8 1353 aa26.67■■□□□ 1.86
RDH5-204ENST00000548082 PDS5BQ9NTI5 1447 aa26.61■■□□□ 1.85
RDH5-204ENST00000548082 CUX2O14529 1486 aa26.55■■□□□ 1.84
RDH5-204ENST00000548082 CCDC88BA6NC98 1476 aa26.5■■□□□ 1.83
RDH5-204ENST00000548082 CFTRP13569 1480 aa26.49■■□□□ 1.83
RDH5-204ENST00000548082 SUPT5HO00267 1087 aaKnown RBP26.48■■□□□ 1.83
RDH5-204ENST00000548082 KIF21AQ7Z4S6 1674 aa26.45■■□□□ 1.82
RDH5-204ENST00000548082 THOC2Q8NI27 1593 aaKnown RBP26.38■■□□□ 1.81
RDH5-204ENST00000548082 FANCD2Q9BXW9 1451 aa26.34■■□□□ 1.81
RDH5-204ENST00000548082 CEP164Q9UPV0 1460 aa26.32■■□□□ 1.8
RDH5-204ENST00000548082 MRC2Q9UBG0 1479 aa26.28■■□□□ 1.8
RDH5-204ENST00000548082 PRDM2Q13029 1718 aa26.21■■□□□ 1.79
RDH5-204ENST00000548082 WDR62O43379 1518 aa26.17■■□□□ 1.78
RDH5-204ENST00000548082 URB2Q14146 1524 aaKnown RBP26.02■■□□□ 1.76
RDH5-204ENST00000548082 ABCC8Q09428 1581 aa26■■□□□ 1.75
RDH5-204ENST00000548082 DNAJC5Q9H3Z4 198 aa25.98■■□□□ 1.75
RDH5-204ENST00000548082 TOPBP1Q92547 1522 aa25.9■■□□□ 1.74
RDH5-204ENST00000548082 DNMBPQ6XZF7 1577 aa25.87■■□□□ 1.73
RDH5-204ENST00000548082 IFT140Q96RY7 1462 aa25.79■■□□□ 1.72
RDH5-204ENST00000548082 CUX1P39880 1505 aa25.68■■□□□ 1.7
RDH5-204ENST00000548082 POLA1P09884 1462 aaPredicted RBP25.67■■□□□ 1.7
RDH5-204ENST00000548082 SOGA1O94964 1423 aa25.63■■□□□ 1.69
RDH5-204ENST00000548082 FGD5Q6ZNL6 1462 aa25.61■■□□□ 1.69
RDH5-204ENST00000548082 ZNF608Q9ULD9 1512 aaPredicted RBP25.61■■□□□ 1.69
RDH5-204ENST00000548082 WRNQ14191 1432 aaPredicted RBP eCLIP25.6■■□□□ 1.69
RDH5-204ENST00000548082 TARBP1Q13395 1621 aaKnown RBP25.57■■□□□ 1.68
RDH5-204ENST00000548082 RAD54L2Q9Y4B4 1467 aa25.54■■□□□ 1.68
RDH5-204ENST00000548082 EIF4G3O43432 1585 aaKnown RBP25.49■■□□□ 1.67
RDH5-204ENST00000548082 OSCARQ8IYS5 282 aa25.49■■□□□ 1.67
RDH5-204ENST00000548082 TOP2BQ02880 1626 aa25.48■■□□□ 1.67
RDH5-204ENST00000548082 AQRO60306 1485 aaKnown RBP eCLIP25.48■■□□□ 1.67
RDH5-204ENST00000548082 WDR97A6NE52 1622 aa25.47■■□□□ 1.67
RDH5-204ENST00000548082 BIVM-ERCC5R4GMW8 1640 aa25.45■■□□□ 1.67
RDH5-204ENST00000548082 TDRD9Q8NDG6 1382 aaKnown RBP25.44■■□□□ 1.66
RDH5-204ENST00000548082 SYNJ1O43426 1573 aa25.43■■□□□ 1.66
RDH5-204ENST00000548082 ABCA10Q8WWZ4 1543 aa25.4■■□□□ 1.66
RDH5-204ENST00000548082 GRIN2BQ13224 1484 aa25.33■■□□□ 1.65
RDH5-204ENST00000548082 GAPVD1Q14C86 1478 aa25.32■■□□□ 1.64
RDH5-204ENST00000548082 FBLN2P98095 1184 aa25.29■■□□□ 1.64
RDH5-204ENST00000548082 MAGI1Q96QZ7 1491 aaPredicted RBP25.26■■□□□ 1.63
RDH5-204ENST00000548082 ABCA5Q8WWZ7 1642 aa25.23■■□□□ 1.63
RDH5-204ENST00000548082 SNAPC4Q5SXM2 1469 aa25.23■■□□□ 1.63
RDH5-204ENST00000548082 CHD1O14646 1710 aa25.22■■□□□ 1.63
RDH5-204ENST00000548082 CHMP7Q8WUX9 453 aaPredicted RBP25.2■■□□□ 1.62
RDH5-204ENST00000548082 PBRM1Q86U86 1689 aa25.17■■□□□ 1.62
RDH5-204ENST00000548082 SYNJ2O15056 1496 aa25.15■■□□□ 1.62
RDH5-204ENST00000548082 ERICH3Q5RHP9 1530 aa25.11■■□□□ 1.61
RDH5-204ENST00000548082 KIF27Q86VH2 1401 aa25.1■■□□□ 1.61
RDH5-204ENST00000548082 TRIM41Q8WV44 630 aa25.08■■□□□ 1.61
RDH5-204ENST00000548082 FHAD1B1AJZ9 1412 aa25.04■■□□□ 1.6
RDH5-204ENST00000548082 ADAMTS12P58397 1594 aa25.01■■□□□ 1.59
RDH5-204ENST00000548082 RIMBP3CA6NJZ7 1639 aa25.01■■□□□ 1.59
RDH5-204ENST00000548082 RIMBP3BA6NNM3 1639 aa25.01■■□□□ 1.59
RDH5-204ENST00000548082 RIMBP3Q9UFD9 1639 aa25.01■■□□□ 1.59
RDH5-204ENST00000548082 ARHGEF11O15085 1522 aa24.99■■□□□ 1.59
RDH5-204ENST00000548082 GRIN2AQ12879 1464 aa24.96■■□□□ 1.59
RDH5-204ENST00000548082 IGF1RP08069 1367 aa24.94■■□□□ 1.58
RDH5-204ENST00000548082 CLASP1Q7Z460 1538 aa24.92■■□□□ 1.58
RDH5-204ENST00000548082 CUL7Q14999 1698 aa24.87■■□□□ 1.57
RDH5-204ENST00000548082 CYB5RLQ6IPT4 315 aa24.85■■□□□ 1.57
RDH5-204ENST00000548082 NUP160Q12769 1436 aa24.85■■□□□ 1.57
RDH5-204ENST00000548082 CARMIL1Q5VZK9 1371 aa24.82■■□□□ 1.56
RDH5-204ENST00000548082 CEP170Q5SW79 1584 aa24.77■■□□□ 1.56
RDH5-204ENST00000548082 ARAP1Q96P48 1450 aa24.77■■□□□ 1.56
RDH5-204ENST00000548082 RUSC2Q8N2Y8 1516 aa24.72■■□□□ 1.55
RDH5-204ENST00000548082 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
RDH5-204ENST00000548082 RAPGEF2Q9Y4G8 1499 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms