Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHL1O00533 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHL1O00533 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHL1O00533 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CHL1O00533 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHL1O00533 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHL1O00533 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHL1O00533 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHL1O00533 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CHL1O00533 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CHL1O00533 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC18.4■□□□□ 0.54
CHL1O00533 DDC-213ENST00000617822 1809 ntTSL 3 BASIC18.4■□□□□ 0.54
CHL1O00533 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHL1O00533 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC18.4■□□□□ 0.54
CHL1O00533 AC006987.1-201ENST00000413610 527 ntBASIC18.4■□□□□ 0.54
CHL1O00533 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC18.4■□□□□ 0.54
CHL1O00533 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC18.4■□□□□ 0.54
CHL1O00533 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHL1O00533 FTLP1-201ENST00000449155 526 ntBASIC18.4■□□□□ 0.54
CHL1O00533 FGFR3P1-201ENST00000449999 601 ntBASIC18.4■□□□□ 0.54
CHL1O00533 GOLGA2P8-201ENST00000505201 779 ntBASIC18.4■□□□□ 0.54
CHL1O00533 MRPL22P1-201ENST00000505398 616 ntBASIC18.4■□□□□ 0.54
CHL1O00533 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC18.4■□□□□ 0.54
CHL1O00533 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHL1O00533 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CHL1O00533 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CHL1O00533 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.4■□□□□ 0.54
CHL1O00533 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHL1O00533 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHL1O00533 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHL1O00533 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHL1O00533 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHL1O00533 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHL1O00533 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CHL1O00533 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHL1O00533 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHL1O00533 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC18.39■□□□□ 0.54
CHL1O00533 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
CHL1O00533 AL591122.2-201ENST00000624125 1853 ntBASIC18.39■□□□□ 0.54
CHL1O00533 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC18.39■□□□□ 0.54
CHL1O00533 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC18.39■□□□□ 0.53
CHL1O00533 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHL1O00533 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CHL1O00533 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHL1O00533 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHL1O00533 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHL1O00533 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHL1O00533 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHL1O00533 AC095040.1-201ENST00000513286 675 ntBASIC18.39■□□□□ 0.53
CHL1O00533 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC18.39■□□□□ 0.53
CHL1O00533 RN7SL665P-201ENST00000578793 300 ntBASIC18.39■□□□□ 0.53
CHL1O00533 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC18.39■□□□□ 0.53
CHL1O00533 BAP1-211ENST00000615113 489 ntBASIC18.39■□□□□ 0.53
CHL1O00533 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CHL1O00533 YRDCP1-201ENST00000621419 643 ntBASIC18.39■□□□□ 0.53
CHL1O00533 AP001184.1-201ENST00000637936 376 ntBASIC18.39■□□□□ 0.53
CHL1O00533 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC18.39■□□□□ 0.53
CHL1O00533 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHL1O00533 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHL1O00533 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC18.39■□□□□ 0.53
CHL1O00533 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC18.39■□□□□ 0.53
CHL1O00533 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CHL1O00533 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHL1O00533 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC18.39■□□□□ 0.53
CHL1O00533 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHL1O00533 USP39-207ENST00000450066 2086 ntTSL 2 BASIC18.38■□□□□ 0.53
CHL1O00533 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC18.38■□□□□ 0.53
CHL1O00533 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHL1O00533 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHL1O00533 SARS-202ENST00000369923 1882 ntTSL 5 BASIC18.38■□□□□ 0.53
CHL1O00533 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHL1O00533 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.38■□□□□ 0.53
CHL1O00533 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHL1O00533 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHL1O00533 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC18.38■□□□□ 0.53
CHL1O00533 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHL1O00533 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.38■□□□□ 0.53
CHL1O00533 AC018635.2-201ENST00000608625 364 ntBASIC18.38■□□□□ 0.53
CHL1O00533 AC084781.1-201ENST00000613737 656 ntBASIC18.38■□□□□ 0.53
CHL1O00533 AL353726.2-201ENST00000623259 884 ntBASIC18.38■□□□□ 0.53
CHL1O00533 AC009145.4-201ENST00000625119 1294 ntBASIC18.38■□□□□ 0.53
CHL1O00533 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHL1O00533 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHL1O00533 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHL1O00533 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CHL1O00533 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHL1O00533 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHL1O00533 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHL1O00533 DUT-208ENST00000559540 1441 ntTSL 2 BASIC18.38■□□□□ 0.53
CHL1O00533 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHL1O00533 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHL1O00533 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC18.38■□□□□ 0.53
CHL1O00533 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC18.38■□□□□ 0.53
CHL1O00533 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHL1O00533 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHL1O00533 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.37■□□□□ 0.53
CHL1O00533 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHL1O00533 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHL1O00533 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC18.37■□□□□ 0.53
CHL1O00533 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms