RNA–Protein interactions for RNA: ENST00000578793.2

RN7SL665P-201, Transcript of RNA, 7SL, cytoplasmic 665, pseudogene, humanhuman

BASIC

Gene RN7SL665P, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL665P-201ENST00000578793 NISCHQ9Y2I1 1504 aa34.04■■■■□ 3.04
RN7SL665P-201ENST00000578793 CCDC180Q9P1Z9 1646 aa30.34■■■□□ 2.45
RN7SL665P-201ENST00000578793 ABCC9O60706 1549 aa29.33■■■□□ 2.29
RN7SL665P-201ENST00000578793 NACADO15069 1562 aa28.43■■■□□ 2.14
RN7SL665P-201ENST00000578793 RB1CC1Q8TDY2 1594 aa28.42■■■□□ 2.14
RN7SL665P-201ENST00000578793 ZCCHC6Q5VYS8 1495 aaKnown RBP28.39■■■□□ 2.13
RN7SL665P-201ENST00000578793 MYO15BQ96JP2 1530 aa28.34■■■□□ 2.13
RN7SL665P-201ENST00000578793 DCAF1Q9Y4B6 1507 aa28.25■■■□□ 2.11
RN7SL665P-201ENST00000578793 DCAF8L2P0C7V8 631 aa28.22■■■□□ 2.11
RN7SL665P-201ENST00000578793 UNC13AQ9UPW8 1703 aa27.86■■■□□ 2.05
RN7SL665P-201ENST00000578793 SCRIBQ14160 1630 aa27.55■■■□□ 2
RN7SL665P-201ENST00000578793 BICRAQ9NZM4 1560 aa27.52■■■□□ 2
RN7SL665P-201ENST00000578793 PABPN1Q86U42 306 aaKnown RBP eCLIP27.36■■□□□ 1.97
RN7SL665P-201ENST00000578793 SHROOM4Q9ULL8 1493 aa27.33■■□□□ 1.97
RN7SL665P-201ENST00000578793 EIF4G1Q04637 1599 aaKnown RBP26.78■■□□□ 1.88
RN7SL665P-201ENST00000578793 DNAJC5BQ9UF47 199 aa26.73■■□□□ 1.87
RN7SL665P-201ENST00000578793 CC2D2AQ9P2K1 1620 aa26.63■■□□□ 1.85
RN7SL665P-201ENST00000578793 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
RN7SL665P-201ENST00000578793 SMARCA4P51532 1647 aa26.42■■□□□ 1.82
RN7SL665P-201ENST00000578793 BAZ1AQ9NRL2 1556 aaPredicted RBP26.41■■□□□ 1.82
RN7SL665P-201ENST00000578793 SMARCA2P51531 1590 aa26.23■■□□□ 1.79
RN7SL665P-201ENST00000578793 PEG3Q9GZU2 1588 aa26.2■■□□□ 1.78
RN7SL665P-201ENST00000578793 MROH2BQ7Z745 1585 aa26.19■■□□□ 1.78
RN7SL665P-201ENST00000578793 NCAPD3P42695 1498 aa26.17■■□□□ 1.78
RN7SL665P-201ENST00000578793 ATAD2BQ9ULI0 1458 aa26.17■■□□□ 1.78
RN7SL665P-201ENST00000578793 HMGXB3Q12766 1538 aa26.11■■□□□ 1.77
RN7SL665P-201ENST00000578793 BAZ1BQ9UIG0 1483 aaKnown RBP25.98■■□□□ 1.75
RN7SL665P-201ENST00000578793 WIZO95785 1651 aa25.96■■□□□ 1.75
RN7SL665P-201ENST00000578793 RSF1Q96T23 1441 aaPredicted RBP25.93■■□□□ 1.74
RN7SL665P-201ENST00000578793 TOP2AP11388 1531 aaKnown RBP25.71■■□□□ 1.71
RN7SL665P-201ENST00000578793 LAMC3Q9Y6N6 1575 aa25.52■■□□□ 1.68
RN7SL665P-201ENST00000578793 NESP48681 1621 aa25.43■■□□□ 1.66
RN7SL665P-201ENST00000578793 CADPSQ9ULU8 1353 aa25.38■■□□□ 1.65
RN7SL665P-201ENST00000578793 CCDC88BA6NC98 1476 aa25.35■■□□□ 1.65
RN7SL665P-201ENST00000578793 PRDM2Q13029 1718 aa25.32■■□□□ 1.64
RN7SL665P-201ENST00000578793 ERCC6Q03468 1493 aa25.31■■□□□ 1.64
RN7SL665P-201ENST00000578793 CFTRP13569 1480 aa25.29■■□□□ 1.64
RN7SL665P-201ENST00000578793 PDS5BQ9NTI5 1447 aa25.29■■□□□ 1.64
RN7SL665P-201ENST00000578793 KIF21AQ7Z4S6 1674 aa25.27■■□□□ 1.64
RN7SL665P-201ENST00000578793 SUPT5HO00267 1087 aaKnown RBP25.27■■□□□ 1.64
RN7SL665P-201ENST00000578793 THOC2Q8NI27 1593 aaKnown RBP25.13■■□□□ 1.61
RN7SL665P-201ENST00000578793 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
RN7SL665P-201ENST00000578793 CEP164Q9UPV0 1460 aa25.08■■□□□ 1.6
RN7SL665P-201ENST00000578793 CUX2O14529 1486 aa25.07■■□□□ 1.6
RN7SL665P-201ENST00000578793 MRC2Q9UBG0 1479 aa25.01■■□□□ 1.59
RN7SL665P-201ENST00000578793 WDR62O43379 1518 aa24.96■■□□□ 1.59
RN7SL665P-201ENST00000578793 URB2Q14146 1524 aaKnown RBP24.83■■□□□ 1.57
RN7SL665P-201ENST00000578793 ABCC8Q09428 1581 aa24.81■■□□□ 1.56
RN7SL665P-201ENST00000578793 DNMBPQ6XZF7 1577 aa24.76■■□□□ 1.55
RN7SL665P-201ENST00000578793 TOPBP1Q92547 1522 aa24.72■■□□□ 1.55
RN7SL665P-201ENST00000578793 CUX1P39880 1505 aa24.58■■□□□ 1.53
RN7SL665P-201ENST00000578793 IFT140Q96RY7 1462 aa24.56■■□□□ 1.52
RN7SL665P-201ENST00000578793 POLA1P09884 1462 aaPredicted RBP24.51■■□□□ 1.51
RN7SL665P-201ENST00000578793 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
RN7SL665P-201ENST00000578793 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
RN7SL665P-201ENST00000578793 TOP2BQ02880 1626 aa24.47■■□□□ 1.51
RN7SL665P-201ENST00000578793 FGD5Q6ZNL6 1462 aa24.47■■□□□ 1.51
RN7SL665P-201ENST00000578793 WRNQ14191 1432 aaPredicted RBP eCLIP24.46■■□□□ 1.51
RN7SL665P-201ENST00000578793 SYNJ1O43426 1573 aa24.42■■□□□ 1.5
RN7SL665P-201ENST00000578793 WDR97A6NE52 1622 aa24.4■■□□□ 1.5
RN7SL665P-201ENST00000578793 SOGA1O94964 1423 aa24.4■■□□□ 1.5
RN7SL665P-201ENST00000578793 EIF4G3O43432 1585 aaKnown RBP24.36■■□□□ 1.49
RN7SL665P-201ENST00000578793 ZNF608Q9ULD9 1512 aaPredicted RBP24.35■■□□□ 1.49
RN7SL665P-201ENST00000578793 RAD54L2Q9Y4B4 1467 aa24.35■■□□□ 1.49
RN7SL665P-201ENST00000578793 ABCA10Q8WWZ4 1543 aa24.28■■□□□ 1.48
RN7SL665P-201ENST00000578793 AQRO60306 1485 aaKnown RBP eCLIP24.23■■□□□ 1.47
RN7SL665P-201ENST00000578793 ABCA5Q8WWZ7 1642 aa24.21■■□□□ 1.47
RN7SL665P-201ENST00000578793 TDRD9Q8NDG6 1382 aaKnown RBP24.19■■□□□ 1.46
RN7SL665P-201ENST00000578793 PBRM1Q86U86 1689 aa24.19■■□□□ 1.46
RN7SL665P-201ENST00000578793 GAPVD1Q14C86 1478 aa24.14■■□□□ 1.46
RN7SL665P-201ENST00000578793 GRIN2BQ13224 1484 aa24.13■■□□□ 1.45
RN7SL665P-201ENST00000578793 MAGI1Q96QZ7 1491 aaPredicted RBP24.09■■□□□ 1.45
RN7SL665P-201ENST00000578793 CHD1O14646 1710 aa24.07■■□□□ 1.44
RN7SL665P-201ENST00000578793 DNAJC5Q9H3Z4 198 aa24.05■■□□□ 1.44
RN7SL665P-201ENST00000578793 SNAPC4Q5SXM2 1469 aa24.05■■□□□ 1.44
RN7SL665P-201ENST00000578793 ERICH3Q5RHP9 1530 aa24.02■■□□□ 1.44
RN7SL665P-201ENST00000578793 OSCARQ8IYS5 282 aa23.98■■□□□ 1.43
RN7SL665P-201ENST00000578793 SYNJ2O15056 1496 aa23.97■■□□□ 1.43
RN7SL665P-201ENST00000578793 KIF27Q86VH2 1401 aa23.96■■□□□ 1.43
RN7SL665P-201ENST00000578793 ADAMTS12P58397 1594 aa23.94■■□□□ 1.42
RN7SL665P-201ENST00000578793 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
RN7SL665P-201ENST00000578793 FHAD1B1AJZ9 1412 aa23.88■■□□□ 1.41
RN7SL665P-201ENST00000578793 CHMP7Q8WUX9 453 aaPredicted RBP23.88■■□□□ 1.41
RN7SL665P-201ENST00000578793 CUL7Q14999 1698 aa23.88■■□□□ 1.41
RN7SL665P-201ENST00000578793 FBLN2P98095 1184 aa23.87■■□□□ 1.41
RN7SL665P-201ENST00000578793 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
RN7SL665P-201ENST00000578793 IGF1RP08069 1367 aa23.8■■□□□ 1.4
RN7SL665P-201ENST00000578793 CLASP1Q7Z460 1538 aa23.77■■□□□ 1.4
RN7SL665P-201ENST00000578793 NUP160Q12769 1436 aa23.71■■□□□ 1.39
RN7SL665P-201ENST00000578793 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
RN7SL665P-201ENST00000578793 CEP170Q5SW79 1584 aa23.7■■□□□ 1.38
RN7SL665P-201ENST00000578793 RUSC2Q8N2Y8 1516 aa23.7■■□□□ 1.38
RN7SL665P-201ENST00000578793 CARMIL1Q5VZK9 1371 aa23.68■■□□□ 1.38
RN7SL665P-201ENST00000578793 RIMBP3CA6NJZ7 1639 aa23.64■■□□□ 1.38
RN7SL665P-201ENST00000578793 RIMBP3BA6NNM3 1639 aa23.64■■□□□ 1.38
RN7SL665P-201ENST00000578793 RIMBP3Q9UFD9 1639 aa23.64■■□□□ 1.38
RN7SL665P-201ENST00000578793 EEA1Q15075 1411 aa23.64■■□□□ 1.37
RN7SL665P-201ENST00000578793 ARHGEF11O15085 1522 aa23.61■■□□□ 1.37
RN7SL665P-201ENST00000578793 RAPGEF2Q9Y4G8 1499 aa23.59■■□□□ 1.37
RN7SL665P-201ENST00000578793 SHROOM2Q13796 1616 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms