RNA–Protein interactions for RNA: ENST00000328205.9

LIN9-201, Transcript of lin-9 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN9, Length 3,567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN9-201ENST00000328205 NISCHQ9Y2I1 1504 aa29.7■■■□□ 2.34
LIN9-201ENST00000328205 SHROOM4Q9ULL8 1493 aa26.59■■□□□ 1.85
LIN9-201ENST00000328205 DCAF8L2P0C7V8 631 aa26.33■■□□□ 1.81
LIN9-201ENST00000328205 SUPT5HO00267 1087 aaKnown RBP26.24■■□□□ 1.79
LIN9-201ENST00000328205 ZCCHC6Q5VYS8 1495 aaKnown RBP24.97■■□□□ 1.59
LIN9-201ENST00000328205 CHIC1Q5VXU3 224 aa24.92■■□□□ 1.58
LIN9-201ENST00000328205 EHMT2Q96KQ7 1210 aa24.89■■□□□ 1.57
LIN9-201ENST00000328205 HRCP23327 699 aa24.71■■□□□ 1.55
LIN9-201ENST00000328205 PCGF6Q9BYE7 350 aa24.71■■□□□ 1.55
LIN9-201ENST00000328205 CCDC180Q9P1Z9 1646 aa24.63■■□□□ 1.53
LIN9-201ENST00000328205 LOC105371045A0A1W2PR82 267 aa24.62■■□□□ 1.53
LIN9-201ENST00000328205 MYO15BQ96JP2 1530 aa24.54■■□□□ 1.52
LIN9-201ENST00000328205 PPARGC1BQ86YN6 1023 aaKnown RBP24.48■■□□□ 1.51
LIN9-201ENST00000328205 FAM9AQ8IZU1 332 aaPredicted RBP24.44■■□□□ 1.5
LIN9-201ENST00000328205 TRIM41Q8WV44 630 aa24.16■■□□□ 1.46
LIN9-201ENST00000328205 ABCC9O60706 1549 aa24.02■■□□□ 1.44
LIN9-201ENST00000328205 SCRIBQ14160 1630 aa23.96■■□□□ 1.43
LIN9-201ENST00000328205 TTBK1Q5TCY1 1321 aaPredicted RBP23.93■■□□□ 1.42
LIN9-201ENST00000328205 DCAF1Q9Y4B6 1507 aa23.83■■□□□ 1.41
LIN9-201ENST00000328205 TRIM26Q12899 539 aaPredicted RBP23.78■■□□□ 1.4
LIN9-201ENST00000328205 RSF1Q96T23 1441 aaPredicted RBP23.75■■□□□ 1.39
LIN9-201ENST00000328205 PELP1Q8IZL8 1130 aaKnown RBP23.72■■□□□ 1.39
LIN9-201ENST00000328205 SCAF1Q9H7N4 1312 aaKnown RBP23.53■■□□□ 1.36
LIN9-201ENST00000328205 CECR2Q9BXF3 1484 aa23.53■■□□□ 1.36
LIN9-201ENST00000328205 RB1CC1Q8TDY2 1594 aa23.42■■□□□ 1.34
LIN9-201ENST00000328205 PABPN1Q86U42 306 aaKnown RBP eCLIP23.41■■□□□ 1.34
LIN9-201ENST00000328205 RANGAP1P46060 587 aaPredicted RBP23.3■■□□□ 1.32
LIN9-201ENST00000328205 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.32
LIN9-201ENST00000328205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.25■■□□□ 1.31
LIN9-201ENST00000328205 UBTFP17480 764 aaKnown RBP23.22■■□□□ 1.31
LIN9-201ENST00000328205 CCER1Q8TC90 406 aaPredicted RBP23.2■■□□□ 1.3
LIN9-201ENST00000328205 ZEB1P37275 1124 aaPredicted RBP23.16■■□□□ 1.3
LIN9-201ENST00000328205 NACADO15069 1562 aa23.12■■□□□ 1.29
LIN9-201ENST00000328205 WIZO95785 1651 aa23.09■■□□□ 1.29
LIN9-201ENST00000328205 NEUROD1Q13562 356 aa22.89■■□□□ 1.25
LIN9-201ENST00000328205 ABCC8Q09428 1581 aa22.85■■□□□ 1.25
LIN9-201ENST00000328205 ACIN1Q9UKV3 1341 aaKnown RBP22.84■■□□□ 1.25
LIN9-201ENST00000328205 CSRNP3Q8WYN3 585 aa22.83■■□□□ 1.24
LIN9-201ENST00000328205 HNRNPUL2Q1KMD3 747 aaKnown RBP22.8■■□□□ 1.24
LIN9-201ENST00000328205 CCDC88BA6NC98 1476 aa22.79■■□□□ 1.24
LIN9-201ENST00000328205 SOGA1O94964 1423 aa22.78■■□□□ 1.24
LIN9-201ENST00000328205 BAZ1AQ9NRL2 1556 aaPredicted RBP22.78■■□□□ 1.24
LIN9-201ENST00000328205 GTF3C3Q9Y5Q9 886 aa22.77■■□□□ 1.24
LIN9-201ENST00000328205 APLP2Q06481 763 aa22.72■■□□□ 1.23
LIN9-201ENST00000328205 MYT1Q01538 1121 aa22.71■■□□□ 1.23
LIN9-201ENST00000328205 RUSC2Q8N2Y8 1516 aa22.63■■□□□ 1.21
LIN9-201ENST00000328205 CEP162Q5TB80 1403 aa22.61■■□□□ 1.21
LIN9-201ENST00000328205 YTHDC1Q96MU7 727 aaKnown RBP22.6■■□□□ 1.21
LIN9-201ENST00000328205 DIEXFQ68CQ4 756 aaKnown RBP22.57■■□□□ 1.2
LIN9-201ENST00000328205 SMARCA4P51532 1647 aa22.51■■□□□ 1.19
LIN9-201ENST00000328205 TOP2AP11388 1531 aaKnown RBP22.5■■□□□ 1.19
LIN9-201ENST00000328205 CENPBP07199 599 aaPredicted RBP22.49■■□□□ 1.19
LIN9-201ENST00000328205 WRNQ14191 1432 aaPredicted RBP eCLIP22.45■■□□□ 1.18
LIN9-201ENST00000328205 SMARCA2P51531 1590 aa22.43■■□□□ 1.18
LIN9-201ENST00000328205 TNIKQ9UKE5 1360 aa22.42■■□□□ 1.18
LIN9-201ENST00000328205 ITGAEP38570 1179 aa22.41■■□□□ 1.18
LIN9-201ENST00000328205 ATP1B4Q9UN42 357 aaPredicted RBP22.31■■□□□ 1.16
LIN9-201ENST00000328205 GOLGA3Q08378 1498 aa22.28■■□□□ 1.16
LIN9-201ENST00000328205 CLIP1P30622 1438 aa22.26■■□□□ 1.15
LIN9-201ENST00000328205 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
LIN9-201ENST00000328205 ZNF316A6NFI3 1004 aaPredicted RBP22.23■■□□□ 1.15
LIN9-201ENST00000328205 EEA1Q15075 1411 aa22.21■■□□□ 1.15
LIN9-201ENST00000328205 UNC13AQ9UPW8 1703 aa22.19■■□□□ 1.14
LIN9-201ENST00000328205 EIF4G1Q04637 1599 aaKnown RBP22.18■■□□□ 1.14
LIN9-201ENST00000328205 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
LIN9-201ENST00000328205 BICRAQ9NZM4 1560 aa22.12■■□□□ 1.13
LIN9-201ENST00000328205 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
LIN9-201ENST00000328205 RAPGEF2Q9Y4G8 1499 aa22.1■■□□□ 1.13
LIN9-201ENST00000328205 P3H3Q8IVL6 736 aa22.1■■□□□ 1.13
LIN9-201ENST00000328205 MIER1Q8N108 512 aa22.07■■□□□ 1.12
LIN9-201ENST00000328205 SYNJ1O43426 1573 aa22.05■■□□□ 1.12
LIN9-201ENST00000328205 KANK4Q5T7N3 995 aaPredicted RBP22.04■■□□□ 1.12
LIN9-201ENST00000328205 VPS8Q8N3P4 1428 aa21.95■■□□□ 1.1
LIN9-201ENST00000328205 FAM50AQ14320 339 aaKnown RBP21.9■■□□□ 1.1
LIN9-201ENST00000328205 KIF27Q86VH2 1401 aa21.77■■□□□ 1.07
LIN9-201ENST00000328205 KIF21BO75037 1637 aa21.74■■□□□ 1.07
LIN9-201ENST00000328205 HIRIP3Q9BW71 556 aaPredicted RBP21.69■■□□□ 1.06
LIN9-201ENST00000328205 PEG3Q9GZU2 1588 aa21.69■■□□□ 1.06
LIN9-201ENST00000328205 CUX2O14529 1486 aa21.67■■□□□ 1.06
LIN9-201ENST00000328205 ARID3CA6NKF2 412 aa21.63■■□□□ 1.05
LIN9-201ENST00000328205 ARAP1Q96P48 1450 aa21.63■■□□□ 1.05
LIN9-201ENST00000328205 BCL11AQ9H165 835 aa21.62■■□□□ 1.05
LIN9-201ENST00000328205 SIN3AQ96ST3 1273 aa21.61■■□□□ 1.05
LIN9-201ENST00000328205 CNGB1Q14028 1251 aaPredicted RBP21.6■■□□□ 1.05
LIN9-201ENST00000328205 DHX57Q6P158 1386 aaKnown RBP21.59■■□□□ 1.05
LIN9-201ENST00000328205 SUPT16HQ9Y5B9 1047 aaKnown RBP21.58■■□□□ 1.05
LIN9-201ENST00000328205 TOP2BQ02880 1626 aa21.58■■□□□ 1.05
LIN9-201ENST00000328205 CUX1P39880 1505 aa21.58■■□□□ 1.05
LIN9-201ENST00000328205 CARMIL1Q5VZK9 1371 aa21.57■■□□□ 1.04
LIN9-201ENST00000328205 CCNB3Q8WWL7 1395 aa21.57■■□□□ 1.04
LIN9-201ENST00000328205 NCAPD3P42695 1498 aa21.56■■□□□ 1.04
LIN9-201ENST00000328205 PRXQ9BXM0 1461 aa21.56■■□□□ 1.04
LIN9-201ENST00000328205 ANP32EQ9BTT0 268 aa21.53■■□□□ 1.04
LIN9-201ENST00000328205 DDX10Q13206 875 aaKnown RBP21.53■■□□□ 1.04
LIN9-201ENST00000328205 IGF1RP08069 1367 aa21.52■■□□□ 1.04
LIN9-201ENST00000328205 TSHZ2Q9NRE2 1034 aa21.51■■□□□ 1.03
LIN9-201ENST00000328205 BCANQ96GW7 911 aa21.49■■□□□ 1.03
LIN9-201ENST00000328205 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
LIN9-201ENST00000328205 KCNH8Q96L42 1107 aa21.47■■□□□ 1.03
LIN9-201ENST00000328205 CFTRP13569 1480 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms