Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFBP01127 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PDGFBP01127 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
PDGFBP01127 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PDGFBP01127 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFBP01127 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.38□□□□□ -0.11
PDGFBP01127 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.38□□□□□ -0.11
PDGFBP01127 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFBP01127 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFBP01127 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.38□□□□□ -0.11
PDGFBP01127 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFBP01127 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.38□□□□□ -0.11
PDGFBP01127 AC007952.5-201ENST00000572818 1486 ntBASIC14.38□□□□□ -0.11
PDGFBP01127 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PDGFBP01127 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
PDGFBP01127 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.37□□□□□ -0.11
PDGFBP01127 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.37□□□□□ -0.11
PDGFBP01127 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.37□□□□□ -0.11
PDGFBP01127 AP005117.1-202ENST00000581724 1908 ntBASIC14.37□□□□□ -0.11
PDGFBP01127 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.37□□□□□ -0.11
PDGFBP01127 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PDGFBP01127 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.37□□□□□ -0.11
PDGFBP01127 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.37□□□□□ -0.11
PDGFBP01127 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PDGFBP01127 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.37□□□□□ -0.11
PDGFBP01127 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.37□□□□□ -0.11
PDGFBP01127 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PDGFBP01127 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 AC022080.1-201ENST00000366255 781 ntBASIC14.37□□□□□ -0.11
PDGFBP01127 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 HNRNPA1P21-201ENST00000424115 961 ntBASIC14.37□□□□□ -0.11
PDGFBP01127 DPY19L2P4-201ENST00000479881 442 ntBASIC14.37□□□□□ -0.11
PDGFBP01127 ALG1L15P-201ENST00000482834 794 ntBASIC14.37□□□□□ -0.11
PDGFBP01127 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC14.37□□□□□ -0.11
PDGFBP01127 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC14.37□□□□□ -0.11
PDGFBP01127 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC14.37□□□□□ -0.11
PDGFBP01127 BMF-206ENST00000558774 671 ntTSL 3 BASIC14.37□□□□□ -0.11
PDGFBP01127 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.37□□□□□ -0.11
PDGFBP01127 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC14.37□□□□□ -0.11
PDGFBP01127 PRMT1P1-201ENST00000604252 1009 ntBASIC14.37□□□□□ -0.11
PDGFBP01127 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.37□□□□□ -0.11
PDGFBP01127 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 AC073869.4-201ENST00000620841 800 ntBASIC14.37□□□□□ -0.11
PDGFBP01127 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.37□□□□□ -0.11
PDGFBP01127 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.37□□□□□ -0.11
PDGFBP01127 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.37□□□□□ -0.11
PDGFBP01127 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFBP01127 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
PDGFBP01127 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.36□□□□□ -0.11
PDGFBP01127 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PDGFBP01127 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PDGFBP01127 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
PDGFBP01127 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.36□□□□□ -0.11
PDGFBP01127 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC14.36□□□□□ -0.11
PDGFBP01127 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC14.36□□□□□ -0.11
PDGFBP01127 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC14.36□□□□□ -0.11
PDGFBP01127 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.36□□□□□ -0.11
PDGFBP01127 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 CDK4P1-201ENST00000454213 828 ntBASIC14.36□□□□□ -0.11
PDGFBP01127 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.36□□□□□ -0.11
PDGFBP01127 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.36□□□□□ -0.11
PDGFBP01127 AC147876.1-201ENST00000504408 322 ntBASIC14.36□□□□□ -0.11
PDGFBP01127 BAK1P2-201ENST00000532665 631 ntBASIC14.36□□□□□ -0.11
PDGFBP01127 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PDGFBP01127 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms