RNA–Protein interactions for RNA: ENST00000424933.1

FRGCA-201, Transcript of FOXM1-regulated, gastric cancer associated, humanhuman

TSL 3 BASIC

Gene FRGCA, Length 422 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRGCA-201ENST00000424933 AEBP2Q6ZN18 517 aaPredicted RBP39.55■■■■□ 3.92
FRGCA-201ENST00000424933 CHIC1Q5VXU3 224 aa37.4■■■■□ 3.58
FRGCA-201ENST00000424933 SENP3Q9H4L4 574 aaPredicted RBP33.6■■■□□ 2.97
FRGCA-201ENST00000424933 PHF23Q9BUL5 403 aaPredicted RBP33.21■■■□□ 2.91
FRGCA-201ENST00000424933 NISCHQ9Y2I1 1504 aa32.3■■■□□ 2.76
FRGCA-201ENST00000424933 FOXD1Q16676 465 aa31.43■■■□□ 2.62
FRGCA-201ENST00000424933 PLPPR3Q6T4P5 718 aa29.8■■■□□ 2.36
FRGCA-201ENST00000424933 PPP6R1Q9UPN7 881 aa29.38■■■□□ 2.29
FRGCA-201ENST00000424933 MSH5O43196 834 aa29.32■■■□□ 2.28
FRGCA-201ENST00000424933 PIAS4Q8N2W9 510 aaPredicted RBP29.3■■■□□ 2.28
FRGCA-201ENST00000424933 ADRA2BP18089 450 aa29.24■■■□□ 2.27
FRGCA-201ENST00000424933 ABCC9O60706 1549 aa28.86■■■□□ 2.21
FRGCA-201ENST00000424933 CCDC180Q9P1Z9 1646 aa28.85■■■□□ 2.21
FRGCA-201ENST00000424933 POTEDQ86YR6 584 aa28.85■■■□□ 2.21
FRGCA-201ENST00000424933 RB1CC1Q8TDY2 1594 aa27.43■■□□□ 1.98
FRGCA-201ENST00000424933 DCAF8L2P0C7V8 631 aa27.37■■□□□ 1.97
FRGCA-201ENST00000424933 NACADO15069 1562 aa27.28■■□□□ 1.96
FRGCA-201ENST00000424933 DNAJC5BQ9UF47 199 aa27.09■■□□□ 1.93
FRGCA-201ENST00000424933 PABPN1Q86U42 306 aaKnown RBP eCLIP26.96■■□□□ 1.91
FRGCA-201ENST00000424933 MAPK8IP2Q13387 824 aaPredicted RBP26.92■■□□□ 1.9
FRGCA-201ENST00000424933 UNC13AQ9UPW8 1703 aa26.9■■□□□ 1.9
FRGCA-201ENST00000424933 MYO15BQ96JP2 1530 aa26.9■■□□□ 1.9
FRGCA-201ENST00000424933 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
FRGCA-201ENST00000424933 BICRAQ9NZM4 1560 aa26.7■■□□□ 1.86
FRGCA-201ENST00000424933 DMRT2Q9Y5R5 561 aa26.68■■□□□ 1.86
FRGCA-201ENST00000424933 DCAF1Q9Y4B6 1507 aa26.61■■□□□ 1.85
FRGCA-201ENST00000424933 SCAF1Q9H7N4 1312 aaKnown RBP26.59■■□□□ 1.85
FRGCA-201ENST00000424933 SCRIBQ14160 1630 aa26.37■■□□□ 1.81
FRGCA-201ENST00000424933 SHROOM4Q9ULL8 1493 aa26.17■■□□□ 1.78
FRGCA-201ENST00000424933 PPP4R3CPQ6ZMV5 832 aa26.16■■□□□ 1.78
FRGCA-201ENST00000424933 CC2D2AQ9P2K1 1620 aa26.05■■□□□ 1.76
FRGCA-201ENST00000424933 EIF4G1Q04637 1599 aaKnown RBP25.99■■□□□ 1.75
FRGCA-201ENST00000424933 CECR2Q9BXF3 1484 aa25.95■■□□□ 1.74
FRGCA-201ENST00000424933 HOXD11P31277 338 aaPredicted RBP25.67■■□□□ 1.7
FRGCA-201ENST00000424933 CNKSR2Q8WXI2 1034 aa25.64■■□□□ 1.7
FRGCA-201ENST00000424933 DCAF8L1A6NGE4 600 aa25.56■■□□□ 1.68
FRGCA-201ENST00000424933 RNF216Q9NWF9 866 aaPredicted RBP25.43■■□□□ 1.66
FRGCA-201ENST00000424933 CACNB1Q02641 598 aaPredicted RBP25.22■■□□□ 1.63
FRGCA-201ENST00000424933 NCAPD3P42695 1498 aa25.21■■□□□ 1.63
FRGCA-201ENST00000424933 ATAD2BQ9ULI0 1458 aa25.17■■□□□ 1.62
FRGCA-201ENST00000424933 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
FRGCA-201ENST00000424933 RNF39Q9H2S5 420 aa25.08■■□□□ 1.61
FRGCA-201ENST00000424933 SMARCA2P51531 1590 aa25.05■■□□□ 1.6
FRGCA-201ENST00000424933 NCBP3Q53F19 620 aaKnown RBP25.02■■□□□ 1.6
FRGCA-201ENST00000424933 BAZ1AQ9NRL2 1556 aaPredicted RBP25.01■■□□□ 1.59
FRGCA-201ENST00000424933 HMGXB3Q12766 1538 aa24.97■■□□□ 1.59
FRGCA-201ENST00000424933 MROH2BQ7Z745 1585 aa24.93■■□□□ 1.58
FRGCA-201ENST00000424933 BAZ1BQ9UIG0 1483 aaKnown RBP24.89■■□□□ 1.58
FRGCA-201ENST00000424933 PEG3Q9GZU2 1588 aa24.87■■□□□ 1.57
FRGCA-201ENST00000424933 ERCC6Q03468 1493 aa24.85■■□□□ 1.57
FRGCA-201ENST00000424933 NESP48681 1621 aa24.85■■□□□ 1.57
FRGCA-201ENST00000424933 NPM3O75607 178 aaKnown RBP24.8■■□□□ 1.56
FRGCA-201ENST00000424933 CUX2O14529 1486 aa24.73■■□□□ 1.55
FRGCA-201ENST00000424933 DNAJC5Q9H3Z4 198 aa24.72■■□□□ 1.55
FRGCA-201ENST00000424933 WIZO95785 1651 aa24.65■■□□□ 1.54
FRGCA-201ENST00000424933 C1QBPQ07021 282 aaKnown RBP24.64■■□□□ 1.54
FRGCA-201ENST00000424933 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
FRGCA-201ENST00000424933 KIF21AQ7Z4S6 1674 aa24.5■■□□□ 1.51
FRGCA-201ENST00000424933 THOC2Q8NI27 1593 aaKnown RBP24.48■■□□□ 1.51
FRGCA-201ENST00000424933 PDS5BQ9NTI5 1447 aa24.47■■□□□ 1.51
FRGCA-201ENST00000424933 CADPSQ9ULU8 1353 aa24.47■■□□□ 1.51
FRGCA-201ENST00000424933 RSF1Q96T23 1441 aaPredicted RBP24.44■■□□□ 1.5
FRGCA-201ENST00000424933 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.41■■□□□ 1.5
FRGCA-201ENST00000424933 KCNA4P22459 653 aa24.28■■□□□ 1.48
FRGCA-201ENST00000424933 TOP2AP11388 1531 aaKnown RBP24.25■■□□□ 1.47
FRGCA-201ENST00000424933 MRC2Q9UBG0 1479 aa24.24■■□□□ 1.47
FRGCA-201ENST00000424933 CFTRP13569 1480 aa24.19■■□□□ 1.46
FRGCA-201ENST00000424933 FANCD2Q9BXW9 1451 aa24.18■■□□□ 1.46
FRGCA-201ENST00000424933 CEP164Q9UPV0 1460 aa24.17■■□□□ 1.46
FRGCA-201ENST00000424933 WDR62O43379 1518 aa24.16■■□□□ 1.46
FRGCA-201ENST00000424933 CCDC88BA6NC98 1476 aa24.07■■□□□ 1.44
FRGCA-201ENST00000424933 URB2Q14146 1524 aaKnown RBP24■■□□□ 1.43
FRGCA-201ENST00000424933 U3KPZ7 1027 aaPredicted RBP23.98■■□□□ 1.43
FRGCA-201ENST00000424933 PRDM2Q13029 1718 aa23.94■■□□□ 1.42
FRGCA-201ENST00000424933 SLC4A2P04920 1241 aa23.74■■□□□ 1.39
FRGCA-201ENST00000424933 OSCARQ8IYS5 282 aa23.74■■□□□ 1.39
FRGCA-201ENST00000424933 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
FRGCA-201ENST00000424933 TRIM41Q8WV44 630 aa23.71■■□□□ 1.39
FRGCA-201ENST00000424933 ZNF608Q9ULD9 1512 aaPredicted RBP23.7■■□□□ 1.38
FRGCA-201ENST00000424933 SPINK5Q9NQ38 1064 aaPredicted RBP23.68■■□□□ 1.38
FRGCA-201ENST00000424933 IFT140Q96RY7 1462 aa23.67■■□□□ 1.38
FRGCA-201ENST00000424933 ABCC8Q09428 1581 aa23.65■■□□□ 1.38
FRGCA-201ENST00000424933 DNMBPQ6XZF7 1577 aa23.63■■□□□ 1.37
FRGCA-201ENST00000424933 SUPT5HO00267 1087 aaKnown RBP23.55■■□□□ 1.36
FRGCA-201ENST00000424933 CAPN15O75808 1086 aa23.55■■□□□ 1.36
FRGCA-201ENST00000424933 TARBP1Q13395 1621 aaKnown RBP23.52■■□□□ 1.36
FRGCA-201ENST00000424933 AQRO60306 1485 aaKnown RBP eCLIP23.52■■□□□ 1.36
FRGCA-201ENST00000424933 EIF4G3O43432 1585 aaKnown RBP23.5■■□□□ 1.35
FRGCA-201ENST00000424933 POLA1P09884 1462 aaPredicted RBP23.49■■□□□ 1.35
FRGCA-201ENST00000424933 DSG3P32926 999 aa23.47■■□□□ 1.35
FRGCA-201ENST00000424933 RAD54L2Q9Y4B4 1467 aa23.47■■□□□ 1.35
FRGCA-201ENST00000424933 SOGA1O94964 1423 aa23.44■■□□□ 1.34
FRGCA-201ENST00000424933 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
FRGCA-201ENST00000424933 CUX1P39880 1505 aa23.39■■□□□ 1.34
FRGCA-201ENST00000424933 FBLN2P98095 1184 aa23.38■■□□□ 1.33
FRGCA-201ENST00000424933 FGD5Q6ZNL6 1462 aa23.37■■□□□ 1.33
FRGCA-201ENST00000424933 RIMBP3CA6NJZ7 1639 aa23.37■■□□□ 1.33
FRGCA-201ENST00000424933 RIMBP3BA6NNM3 1639 aa23.37■■□□□ 1.33
FRGCA-201ENST00000424933 RIMBP3Q9UFD9 1639 aa23.37■■□□□ 1.33
FRGCA-201ENST00000424933 CHD1O14646 1710 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms