RNA–Protein interactions for RNA: ENST00000619989.1

CCL3L3-203, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3L3, Length 784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-203ENST00000619989 NISCHQ9Y2I1 1504 aa32.81■■■□□ 2.84
CCL3L3-203ENST00000619989 AEBP2Q6ZN18 517 aaPredicted RBP30.42■■■□□ 2.46
CCL3L3-203ENST00000619989 CHIC1Q5VXU3 224 aa29.59■■■□□ 2.33
CCL3L3-203ENST00000619989 CCDC180Q9P1Z9 1646 aa29.07■■■□□ 2.24
CCL3L3-203ENST00000619989 ABCC9O60706 1549 aa28.55■■■□□ 2.16
CCL3L3-203ENST00000619989 DCAF8L2P0C7V8 631 aa27.62■■■□□ 2.01
CCL3L3-203ENST00000619989 RB1CC1Q8TDY2 1594 aa27.4■■□□□ 1.98
CCL3L3-203ENST00000619989 NACADO15069 1562 aa27.37■■□□□ 1.97
CCL3L3-203ENST00000619989 ZCCHC6Q5VYS8 1495 aaKnown RBP27.31■■□□□ 1.96
CCL3L3-203ENST00000619989 MYO15BQ96JP2 1530 aa27.16■■□□□ 1.94
CCL3L3-203ENST00000619989 DCAF1Q9Y4B6 1507 aa27.08■■□□□ 1.93
CCL3L3-203ENST00000619989 PABPN1Q86U42 306 aaKnown RBP eCLIP26.76■■□□□ 1.87
CCL3L3-203ENST00000619989 UNC13AQ9UPW8 1703 aa26.75■■□□□ 1.87
CCL3L3-203ENST00000619989 SCRIBQ14160 1630 aa26.63■■□□□ 1.85
CCL3L3-203ENST00000619989 BICRAQ9NZM4 1560 aa26.56■■□□□ 1.84
CCL3L3-203ENST00000619989 DNAJC5BQ9UF47 199 aa26.22■■□□□ 1.79
CCL3L3-203ENST00000619989 SHROOM4Q9ULL8 1493 aa26.22■■□□□ 1.79
CCL3L3-203ENST00000619989 PHF23Q9BUL5 403 aaPredicted RBP26.02■■□□□ 1.76
CCL3L3-203ENST00000619989 EIF4G1Q04637 1599 aaKnown RBP25.87■■□□□ 1.73
CCL3L3-203ENST00000619989 SENP3Q9H4L4 574 aaPredicted RBP25.8■■□□□ 1.72
CCL3L3-203ENST00000619989 CC2D2AQ9P2K1 1620 aa25.77■■□□□ 1.72
CCL3L3-203ENST00000619989 CECR2Q9BXF3 1484 aa25.62■■□□□ 1.69
CCL3L3-203ENST00000619989 SMARCA4P51532 1647 aa25.43■■□□□ 1.66
CCL3L3-203ENST00000619989 BAZ1AQ9NRL2 1556 aaPredicted RBP25.41■■□□□ 1.66
CCL3L3-203ENST00000619989 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
CCL3L3-203ENST00000619989 ATAD2BQ9ULI0 1458 aa25.31■■□□□ 1.64
CCL3L3-203ENST00000619989 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
CCL3L3-203ENST00000619989 SMARCA2P51531 1590 aa25.26■■□□□ 1.63
CCL3L3-203ENST00000619989 PEG3Q9GZU2 1588 aa25.14■■□□□ 1.61
CCL3L3-203ENST00000619989 BAZ1BQ9UIG0 1483 aaKnown RBP25.12■■□□□ 1.61
CCL3L3-203ENST00000619989 HMGXB3Q12766 1538 aa25.12■■□□□ 1.61
CCL3L3-203ENST00000619989 RSF1Q96T23 1441 aaPredicted RBP25.04■■□□□ 1.6
CCL3L3-203ENST00000619989 WIZO95785 1651 aa25.04■■□□□ 1.6
CCL3L3-203ENST00000619989 TOP2AP11388 1531 aaKnown RBP24.74■■□□□ 1.55
CCL3L3-203ENST00000619989 NESP48681 1621 aa24.72■■□□□ 1.55
CCL3L3-203ENST00000619989 ERCC6Q03468 1493 aa24.61■■□□□ 1.53
CCL3L3-203ENST00000619989 SUPT5HO00267 1087 aaKnown RBP24.59■■□□□ 1.53
CCL3L3-203ENST00000619989 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
CCL3L3-203ENST00000619989 CADPSQ9ULU8 1353 aa24.58■■□□□ 1.53
CCL3L3-203ENST00000619989 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
CCL3L3-203ENST00000619989 PDS5BQ9NTI5 1447 aa24.48■■□□□ 1.51
CCL3L3-203ENST00000619989 CFTRP13569 1480 aa24.41■■□□□ 1.5
CCL3L3-203ENST00000619989 KIF21AQ7Z4S6 1674 aa24.36■■□□□ 1.49
CCL3L3-203ENST00000619989 FANCD2Q9BXW9 1451 aa24.29■■□□□ 1.48
CCL3L3-203ENST00000619989 CUX2O14529 1486 aa24.26■■□□□ 1.47
CCL3L3-203ENST00000619989 CEP164Q9UPV0 1460 aa24.25■■□□□ 1.47
CCL3L3-203ENST00000619989 THOC2Q8NI27 1593 aaKnown RBP24.24■■□□□ 1.47
CCL3L3-203ENST00000619989 MRC2Q9UBG0 1479 aa24.19■■□□□ 1.46
CCL3L3-203ENST00000619989 PRDM2Q13029 1718 aa24.14■■□□□ 1.45
CCL3L3-203ENST00000619989 WDR62O43379 1518 aa24.08■■□□□ 1.45
CCL3L3-203ENST00000619989 URB2Q14146 1524 aaKnown RBP24.04■■□□□ 1.44
CCL3L3-203ENST00000619989 PLPPR3Q6T4P5 718 aa24■■□□□ 1.43
CCL3L3-203ENST00000619989 FOXD1Q16676 465 aa23.97■■□□□ 1.43
CCL3L3-203ENST00000619989 TOPBP1Q92547 1522 aa23.89■■□□□ 1.42
CCL3L3-203ENST00000619989 ABCC8Q09428 1581 aa23.88■■□□□ 1.41
CCL3L3-203ENST00000619989 DNMBPQ6XZF7 1577 aa23.84■■□□□ 1.41
CCL3L3-203ENST00000619989 IFT140Q96RY7 1462 aa23.73■■□□□ 1.39
CCL3L3-203ENST00000619989 CUX1P39880 1505 aa23.73■■□□□ 1.39
CCL3L3-203ENST00000619989 POLA1P09884 1462 aaPredicted RBP23.69■■□□□ 1.38
CCL3L3-203ENST00000619989 SOGA1O94964 1423 aa23.66■■□□□ 1.38
CCL3L3-203ENST00000619989 FGD5Q6ZNL6 1462 aa23.65■■□□□ 1.38
CCL3L3-203ENST00000619989 ZNF608Q9ULD9 1512 aaPredicted RBP23.64■■□□□ 1.38
CCL3L3-203ENST00000619989 RAD54L2Q9Y4B4 1467 aa23.64■■□□□ 1.38
CCL3L3-203ENST00000619989 WRNQ14191 1432 aaPredicted RBP eCLIP23.62■■□□□ 1.37
CCL3L3-203ENST00000619989 TARBP1Q13395 1621 aaKnown RBP23.6■■□□□ 1.37
CCL3L3-203ENST00000619989 DNAJC5Q9H3Z4 198 aa23.56■■□□□ 1.36
CCL3L3-203ENST00000619989 AQRO60306 1485 aaKnown RBP eCLIP23.56■■□□□ 1.36
CCL3L3-203ENST00000619989 TDRD9Q8NDG6 1382 aaKnown RBP23.53■■□□□ 1.36
CCL3L3-203ENST00000619989 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
CCL3L3-203ENST00000619989 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
CCL3L3-203ENST00000619989 EIF4G3O43432 1585 aaKnown RBP23.5■■□□□ 1.35
CCL3L3-203ENST00000619989 BIVM-ERCC5R4GMW8 1640 aa23.48■■□□□ 1.35
CCL3L3-203ENST00000619989 ABCA10Q8WWZ4 1543 aa23.4■■□□□ 1.34
CCL3L3-203ENST00000619989 OSCARQ8IYS5 282 aa23.38■■□□□ 1.33
CCL3L3-203ENST00000619989 WDR97A6NE52 1622 aa23.37■■□□□ 1.33
CCL3L3-203ENST00000619989 FBLN2P98095 1184 aa23.36■■□□□ 1.33
CCL3L3-203ENST00000619989 GAPVD1Q14C86 1478 aa23.36■■□□□ 1.33
CCL3L3-203ENST00000619989 GRIN2BQ13224 1484 aa23.33■■□□□ 1.33
CCL3L3-203ENST00000619989 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
CCL3L3-203ENST00000619989 ABCA5Q8WWZ7 1642 aa23.27■■□□□ 1.32
CCL3L3-203ENST00000619989 CHMP7Q8WUX9 453 aaPredicted RBP23.25■■□□□ 1.31
CCL3L3-203ENST00000619989 PBRM1Q86U86 1689 aa23.24■■□□□ 1.31
CCL3L3-203ENST00000619989 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
CCL3L3-203ENST00000619989 CHD1O14646 1710 aa23.2■■□□□ 1.3
CCL3L3-203ENST00000619989 POTEDQ86YR6 584 aa23.19■■□□□ 1.3
CCL3L3-203ENST00000619989 TRIM41Q8WV44 630 aa23.19■■□□□ 1.3
CCL3L3-203ENST00000619989 SYNJ2O15056 1496 aa23.16■■□□□ 1.3
CCL3L3-203ENST00000619989 KIF27Q86VH2 1401 aa23.13■■□□□ 1.29
CCL3L3-203ENST00000619989 ERICH3Q5RHP9 1530 aa23.11■■□□□ 1.29
CCL3L3-203ENST00000619989 FHAD1B1AJZ9 1412 aa23.08■■□□□ 1.28
CCL3L3-203ENST00000619989 ADAMTS12P58397 1594 aa23.06■■□□□ 1.28
CCL3L3-203ENST00000619989 IGF1RP08069 1367 aa23.05■■□□□ 1.28
CCL3L3-203ENST00000619989 GRIN2AQ12879 1464 aa23.02■■□□□ 1.28
CCL3L3-203ENST00000619989 ADRA2BP18089 450 aa23.01■■□□□ 1.27
CCL3L3-203ENST00000619989 PPP6R1Q9UPN7 881 aa23.01■■□□□ 1.27
CCL3L3-203ENST00000619989 RUSC2Q8N2Y8 1516 aa22.97■■□□□ 1.27
CCL3L3-203ENST00000619989 CLASP1Q7Z460 1538 aa22.93■■□□□ 1.26
CCL3L3-203ENST00000619989 CARMIL1Q5VZK9 1371 aa22.92■■□□□ 1.26
CCL3L3-203ENST00000619989 ARHGEF11O15085 1522 aa22.91■■□□□ 1.26
CCL3L3-203ENST00000619989 RIMBP3CA6NJZ7 1639 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms