RNA–Protein interactions for RNA: ENST00000280325.5

C11orf53-201, Transcript of chromosome 11 open reading frame 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene C11orf53, Length 1,208 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-201ENST00000280325 NISCHQ9Y2I1 1504 aa32.86■■■□□ 2.85
C11orf53-201ENST00000280325 CCDC180Q9P1Z9 1646 aa29.23■■■□□ 2.27
C11orf53-201ENST00000280325 ABCC9O60706 1549 aa28.77■■■□□ 2.2
C11orf53-201ENST00000280325 RB1CC1Q8TDY2 1594 aa27.58■■■□□ 2.01
C11orf53-201ENST00000280325 DCAF8L2P0C7V8 631 aa27.53■■■□□ 2
C11orf53-201ENST00000280325 NACADO15069 1562 aa27.52■■■□□ 2
C11orf53-201ENST00000280325 ZCCHC6Q5VYS8 1495 aaKnown RBP27.35■■□□□ 1.97
C11orf53-201ENST00000280325 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
C11orf53-201ENST00000280325 DCAF1Q9Y4B6 1507 aa27.16■■□□□ 1.94
C11orf53-201ENST00000280325 UNC13AQ9UPW8 1703 aa26.95■■□□□ 1.9
C11orf53-201ENST00000280325 PABPN1Q86U42 306 aaKnown RBP eCLIP26.88■■□□□ 1.89
C11orf53-201ENST00000280325 BICRAQ9NZM4 1560 aa26.78■■□□□ 1.88
C11orf53-201ENST00000280325 SCRIBQ14160 1630 aa26.7■■□□□ 1.86
C11orf53-201ENST00000280325 DNAJC5BQ9UF47 199 aa26.54■■□□□ 1.84
C11orf53-201ENST00000280325 SHROOM4Q9ULL8 1493 aa26.44■■□□□ 1.82
C11orf53-201ENST00000280325 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
C11orf53-201ENST00000280325 CC2D2AQ9P2K1 1620 aa25.99■■□□□ 1.75
C11orf53-201ENST00000280325 CECR2Q9BXF3 1484 aa25.85■■□□□ 1.73
C11orf53-201ENST00000280325 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
C11orf53-201ENST00000280325 BAZ1AQ9NRL2 1556 aaPredicted RBP25.46■■□□□ 1.67
C11orf53-201ENST00000280325 ATAD2BQ9ULI0 1458 aa25.42■■□□□ 1.66
C11orf53-201ENST00000280325 NCAPD3P42695 1498 aa25.41■■□□□ 1.66
C11orf53-201ENST00000280325 SMARCA2P51531 1590 aa25.36■■□□□ 1.65
C11orf53-201ENST00000280325 MROH2BQ7Z745 1585 aa25.34■■□□□ 1.65
C11orf53-201ENST00000280325 HMGXB3Q12766 1538 aa25.27■■□□□ 1.64
C11orf53-201ENST00000280325 PEG3Q9GZU2 1588 aa25.26■■□□□ 1.63
C11orf53-201ENST00000280325 BAZ1BQ9UIG0 1483 aaKnown RBP25.2■■□□□ 1.62
C11orf53-201ENST00000280325 WIZO95785 1651 aa25.04■■□□□ 1.6
C11orf53-201ENST00000280325 RSF1Q96T23 1441 aaPredicted RBP25.01■■□□□ 1.59
C11orf53-201ENST00000280325 NESP48681 1621 aa24.86■■□□□ 1.57
C11orf53-201ENST00000280325 ERCC6Q03468 1493 aa24.79■■□□□ 1.56
C11orf53-201ENST00000280325 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
C11orf53-201ENST00000280325 LAMC3Q9Y6N6 1575 aa24.75■■□□□ 1.55
C11orf53-201ENST00000280325 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
C11orf53-201ENST00000280325 PDS5BQ9NTI5 1447 aa24.6■■□□□ 1.53
C11orf53-201ENST00000280325 CUX2O14529 1486 aa24.55■■□□□ 1.52
C11orf53-201ENST00000280325 KIF21AQ7Z4S6 1674 aa24.53■■□□□ 1.52
C11orf53-201ENST00000280325 CFTRP13569 1480 aa24.5■■□□□ 1.51
C11orf53-201ENST00000280325 CCDC88BA6NC98 1476 aa24.49■■□□□ 1.51
C11orf53-201ENST00000280325 THOC2Q8NI27 1593 aaKnown RBP24.49■■□□□ 1.51
C11orf53-201ENST00000280325 FANCD2Q9BXW9 1451 aa24.39■■□□□ 1.5
C11orf53-201ENST00000280325 CEP164Q9UPV0 1460 aa24.37■■□□□ 1.49
C11orf53-201ENST00000280325 MRC2Q9UBG0 1479 aa24.36■■□□□ 1.49
C11orf53-201ENST00000280325 SUPT5HO00267 1087 aaKnown RBP24.3■■□□□ 1.48
C11orf53-201ENST00000280325 WDR62O43379 1518 aa24.28■■□□□ 1.48
C11orf53-201ENST00000280325 PRDM2Q13029 1718 aa24.25■■□□□ 1.47
C11orf53-201ENST00000280325 URB2Q14146 1524 aaKnown RBP24.16■■□□□ 1.46
C11orf53-201ENST00000280325 DNAJC5Q9H3Z4 198 aa24.09■■□□□ 1.45
C11orf53-201ENST00000280325 TOPBP1Q92547 1522 aa23.99■■□□□ 1.43
C11orf53-201ENST00000280325 ABCC8Q09428 1581 aa23.95■■□□□ 1.42
C11orf53-201ENST00000280325 DNMBPQ6XZF7 1577 aa23.94■■□□□ 1.42
C11orf53-201ENST00000280325 IFT140Q96RY7 1462 aa23.86■■□□□ 1.41
C11orf53-201ENST00000280325 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
C11orf53-201ENST00000280325 POLA1P09884 1462 aaPredicted RBP23.78■■□□□ 1.4
C11orf53-201ENST00000280325 CUX1P39880 1505 aa23.77■■□□□ 1.4
C11orf53-201ENST00000280325 TARBP1Q13395 1621 aaKnown RBP23.73■■□□□ 1.39
C11orf53-201ENST00000280325 FGD5Q6ZNL6 1462 aa23.71■■□□□ 1.39
C11orf53-201ENST00000280325 RAD54L2Q9Y4B4 1467 aa23.69■■□□□ 1.38
C11orf53-201ENST00000280325 SOGA1O94964 1423 aa23.68■■□□□ 1.38
C11orf53-201ENST00000280325 EIF4G3O43432 1585 aaKnown RBP23.66■■□□□ 1.38
C11orf53-201ENST00000280325 AQRO60306 1485 aaKnown RBP eCLIP23.63■■□□□ 1.37
C11orf53-201ENST00000280325 TDRD9Q8NDG6 1382 aaKnown RBP23.58■■□□□ 1.37
C11orf53-201ENST00000280325 WRNQ14191 1432 aaPredicted RBP eCLIP23.58■■□□□ 1.36
C11orf53-201ENST00000280325 OSCARQ8IYS5 282 aa23.53■■□□□ 1.36
C11orf53-201ENST00000280325 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
C11orf53-201ENST00000280325 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
C11orf53-201ENST00000280325 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
C11orf53-201ENST00000280325 WDR97A6NE52 1622 aa23.5■■□□□ 1.35
C11orf53-201ENST00000280325 ABCA10Q8WWZ4 1543 aa23.46■■□□□ 1.35
C11orf53-201ENST00000280325 GRIN2BQ13224 1484 aa23.41■■□□□ 1.34
C11orf53-201ENST00000280325 SNAPC4Q5SXM2 1469 aa23.41■■□□□ 1.34
C11orf53-201ENST00000280325 GAPVD1Q14C86 1478 aa23.4■■□□□ 1.34
C11orf53-201ENST00000280325 CHD1O14646 1710 aa23.38■■□□□ 1.33
C11orf53-201ENST00000280325 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
C11orf53-201ENST00000280325 FBLN2P98095 1184 aa23.37■■□□□ 1.33
C11orf53-201ENST00000280325 MAGI1Q96QZ7 1491 aaPredicted RBP23.36■■□□□ 1.33
C11orf53-201ENST00000280325 PBRM1Q86U86 1689 aa23.33■■□□□ 1.33
C11orf53-201ENST00000280325 CHMP7Q8WUX9 453 aaPredicted RBP23.28■■□□□ 1.32
C11orf53-201ENST00000280325 SYNJ2O15056 1496 aa23.27■■□□□ 1.32
C11orf53-201ENST00000280325 ADAMTS12P58397 1594 aa23.17■■□□□ 1.3
C11orf53-201ENST00000280325 ERICH3Q5RHP9 1530 aa23.17■■□□□ 1.3
C11orf53-201ENST00000280325 RIMBP3CA6NJZ7 1639 aa23.16■■□□□ 1.3
C11orf53-201ENST00000280325 RIMBP3BA6NNM3 1639 aa23.16■■□□□ 1.3
C11orf53-201ENST00000280325 RIMBP3Q9UFD9 1639 aa23.16■■□□□ 1.3
C11orf53-201ENST00000280325 ARHGEF11O15085 1522 aa23.15■■□□□ 1.3
C11orf53-201ENST00000280325 TRIM41Q8WV44 630 aa23.15■■□□□ 1.3
C11orf53-201ENST00000280325 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
C11orf53-201ENST00000280325 FHAD1B1AJZ9 1412 aa23.12■■□□□ 1.29
C11orf53-201ENST00000280325 GRIN2AQ12879 1464 aa23.11■■□□□ 1.29
C11orf53-201ENST00000280325 KIF27Q86VH2 1401 aa23.08■■□□□ 1.29
C11orf53-201ENST00000280325 NUP160Q12769 1436 aa23.02■■□□□ 1.28
C11orf53-201ENST00000280325 IGF1RP08069 1367 aa23.01■■□□□ 1.27
C11orf53-201ENST00000280325 CEP170Q5SW79 1584 aa23.01■■□□□ 1.27
C11orf53-201ENST00000280325 ARAP1Q96P48 1450 aa22.97■■□□□ 1.27
C11orf53-201ENST00000280325 CYB5RLQ6IPT4 315 aa22.96■■□□□ 1.27
C11orf53-201ENST00000280325 CUL7Q14999 1698 aa22.92■■□□□ 1.26
C11orf53-201ENST00000280325 CARMIL1Q5VZK9 1371 aa22.88■■□□□ 1.25
C11orf53-201ENST00000280325 RUSC2Q8N2Y8 1516 aa22.87■■□□□ 1.25
C11orf53-201ENST00000280325 SHROOM2Q13796 1616 aa22.84■■□□□ 1.25
C11orf53-201ENST00000280325 ERCC6L2Q5T890 1561 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms