RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 NISCHQ9Y2I1 1504 aa35.26■■■■□ 3.23
CACNB3-203ENST00000540990 CCDC180Q9P1Z9 1646 aa30.14■■■□□ 2.42
CACNB3-203ENST00000540990 ZCCHC6Q5VYS8 1495 aaKnown RBP29.87■■■□□ 2.37
CACNB3-203ENST00000540990 SHROOM4Q9ULL8 1493 aa29.54■■■□□ 2.32
CACNB3-203ENST00000540990 DCAF1Q9Y4B6 1507 aa29.16■■■□□ 2.26
CACNB3-203ENST00000540990 SUPT5HO00267 1087 aaKnown RBP28.99■■■□□ 2.23
CACNB3-203ENST00000540990 DCAF8L2P0C7V8 631 aa28.63■■■□□ 2.17
CACNB3-203ENST00000540990 CHIC1Q5VXU3 224 aa28.44■■■□□ 2.14
CACNB3-203ENST00000540990 MYO15BQ96JP2 1530 aa28.38■■■□□ 2.13
CACNB3-203ENST00000540990 ABCC9O60706 1549 aa28.17■■■□□ 2.1
CACNB3-203ENST00000540990 SCRIBQ14160 1630 aa27.89■■■□□ 2.06
CACNB3-203ENST00000540990 RSF1Q96T23 1441 aaPredicted RBP27.83■■■□□ 2.05
CACNB3-203ENST00000540990 NACADO15069 1562 aa27.81■■■□□ 2.04
CACNB3-203ENST00000540990 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
CACNB3-203ENST00000540990 HRCP23327 699 aa27.56■■■□□ 2
CACNB3-203ENST00000540990 LOC105371045A0A1W2PR82 267 aa27.38■■□□□ 1.97
CACNB3-203ENST00000540990 CECR2Q9BXF3 1484 aa27.33■■□□□ 1.97
CACNB3-203ENST00000540990 PCGF6Q9BYE7 350 aa27.32■■□□□ 1.96
CACNB3-203ENST00000540990 MROH2BQ7Z745 1585 aa27.3■■□□□ 1.96
CACNB3-203ENST00000540990 TRIM41Q8WV44 630 aa27.16■■□□□ 1.94
CACNB3-203ENST00000540990 BAZ1AQ9NRL2 1556 aaPredicted RBP27.12■■□□□ 1.93
CACNB3-203ENST00000540990 WIZO95785 1651 aa27.11■■□□□ 1.93
CACNB3-203ENST00000540990 TRIM26Q12899 539 aaPredicted RBP27.05■■□□□ 1.92
CACNB3-203ENST00000540990 EIF4G1Q04637 1599 aaKnown RBP26.98■■□□□ 1.91
CACNB3-203ENST00000540990 TOP2AP11388 1531 aaKnown RBP26.86■■□□□ 1.89
CACNB3-203ENST00000540990 SMARCA4P51532 1647 aa26.83■■□□□ 1.89
CACNB3-203ENST00000540990 UNC13AQ9UPW8 1703 aa26.8■■□□□ 1.88
CACNB3-203ENST00000540990 PPARGC1BQ86YN6 1023 aaKnown RBP26.69■■□□□ 1.86
CACNB3-203ENST00000540990 FAM9AQ8IZU1 332 aaPredicted RBP26.69■■□□□ 1.86
CACNB3-203ENST00000540990 SMARCA2P51531 1590 aa26.66■■□□□ 1.86
CACNB3-203ENST00000540990 CCDC88BA6NC98 1476 aa26.63■■□□□ 1.85
CACNB3-203ENST00000540990 ZEB1P37275 1124 aaPredicted RBP26.56■■□□□ 1.84
CACNB3-203ENST00000540990 BICRAQ9NZM4 1560 aa26.52■■□□□ 1.84
CACNB3-203ENST00000540990 PEG3Q9GZU2 1588 aa26.5■■□□□ 1.83
CACNB3-203ENST00000540990 ABCC8Q09428 1581 aa26.42■■□□□ 1.82
CACNB3-203ENST00000540990 EEA1Q15075 1411 aa26.35■■□□□ 1.81
CACNB3-203ENST00000540990 WRNQ14191 1432 aaPredicted RBP eCLIP26.31■■□□□ 1.8
CACNB3-203ENST00000540990 EHMT2Q96KQ7 1210 aa26.24■■□□□ 1.79
CACNB3-203ENST00000540990 TNIKQ9UKE5 1360 aa26.22■■□□□ 1.79
CACNB3-203ENST00000540990 SOGA1O94964 1423 aa26.2■■□□□ 1.78
CACNB3-203ENST00000540990 PABPN1Q86U42 306 aaKnown RBP eCLIP26.16■■□□□ 1.78
CACNB3-203ENST00000540990 CEP162Q5TB80 1403 aa26.14■■□□□ 1.78
CACNB3-203ENST00000540990 ATAD2BQ9ULI0 1458 aa26.13■■□□□ 1.77
CACNB3-203ENST00000540990 CSRNP3Q8WYN3 585 aa26.09■■□□□ 1.77
CACNB3-203ENST00000540990 RUSC2Q8N2Y8 1516 aa26.05■■□□□ 1.76
CACNB3-203ENST00000540990 GOLGA3Q08378 1498 aa26.04■■□□□ 1.76
CACNB3-203ENST00000540990 BAZ1BQ9UIG0 1483 aaKnown RBP26■■□□□ 1.75
CACNB3-203ENST00000540990 SYNJ1O43426 1573 aa25.98■■□□□ 1.75
CACNB3-203ENST00000540990 KIF21BO75037 1637 aa25.96■■□□□ 1.75
CACNB3-203ENST00000540990 CEP164Q9UPV0 1460 aa25.91■■□□□ 1.74
CACNB3-203ENST00000540990 UBTFP17480 764 aaKnown RBP25.8■■□□□ 1.72
CACNB3-203ENST00000540990 TOP2BQ02880 1626 aa25.77■■□□□ 1.72
CACNB3-203ENST00000540990 HMGXB3Q12766 1538 aa25.75■■□□□ 1.71
CACNB3-203ENST00000540990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.74■■□□□ 1.71
CACNB3-203ENST00000540990 CCER1Q8TC90 406 aaPredicted RBP25.73■■□□□ 1.71
CACNB3-203ENST00000540990 BIVM-ERCC5R4GMW8 1640 aa25.73■■□□□ 1.71
CACNB3-203ENST00000540990 NCAPD3P42695 1498 aa25.71■■□□□ 1.71
CACNB3-203ENST00000540990 CLIP1P30622 1438 aa25.66■■□□□ 1.7
CACNB3-203ENST00000540990 VPS8Q8N3P4 1428 aa25.62■■□□□ 1.69
CACNB3-203ENST00000540990 RAPGEF2Q9Y4G8 1499 aa25.61■■□□□ 1.69
CACNB3-203ENST00000540990 ERICH3Q5RHP9 1530 aa25.57■■□□□ 1.68
CACNB3-203ENST00000540990 PRXQ9BXM0 1461 aa25.52■■□□□ 1.68
CACNB3-203ENST00000540990 CFTRP13569 1480 aa25.46■■□□□ 1.67
CACNB3-203ENST00000540990 TTBK1Q5TCY1 1321 aaPredicted RBP25.45■■□□□ 1.66
CACNB3-203ENST00000540990 CUX1P39880 1505 aa25.44■■□□□ 1.66
CACNB3-203ENST00000540990 KIF27Q86VH2 1401 aa25.33■■□□□ 1.65
CACNB3-203ENST00000540990 PRDM2Q13029 1718 aa25.32■■□□□ 1.64
CACNB3-203ENST00000540990 ARAP1Q96P48 1450 aa25.31■■□□□ 1.64
CACNB3-203ENST00000540990 APLP2Q06481 763 aa25.28■■□□□ 1.64
CACNB3-203ENST00000540990 DIEXFQ68CQ4 756 aaKnown RBP25.27■■□□□ 1.64
CACNB3-203ENST00000540990 SCAF1Q9H7N4 1312 aaKnown RBP25.25■■□□□ 1.63
CACNB3-203ENST00000540990 ZNF316A6NFI3 1004 aaPredicted RBP25.19■■□□□ 1.62
CACNB3-203ENST00000540990 HNRNPUL2Q1KMD3 747 aaKnown RBP25.16■■□□□ 1.62
CACNB3-203ENST00000540990 ACIN1Q9UKV3 1341 aaKnown RBP25.12■■□□□ 1.61
CACNB3-203ENST00000540990 CADPSQ9ULU8 1353 aa25.12■■□□□ 1.61
CACNB3-203ENST00000540990 CLSPNQ9HAW4 1339 aa25.1■■□□□ 1.61
CACNB3-203ENST00000540990 RRBP1Q9P2E9 1410 aaKnown RBP25.09■■□□□ 1.61
CACNB3-203ENST00000540990 ARHGAP35Q9NRY4 1499 aa25.09■■□□□ 1.61
CACNB3-203ENST00000540990 IGF1RP08069 1367 aa25.04■■□□□ 1.6
CACNB3-203ENST00000540990 CUX2O14529 1486 aa25.02■■□□□ 1.6
CACNB3-203ENST00000540990 MAP3K1Q13233 1512 aa25.01■■□□□ 1.59
CACNB3-203ENST00000540990 RANGAP1P46060 587 aaPredicted RBP25■■□□□ 1.59
CACNB3-203ENST00000540990 NEUROD1Q13562 356 aa24.99■■□□□ 1.59
CACNB3-203ENST00000540990 KANK4Q5T7N3 995 aaPredicted RBP24.99■■□□□ 1.59
CACNB3-203ENST00000540990 CENPBP07199 599 aaPredicted RBP24.98■■□□□ 1.59
CACNB3-203ENST00000540990 FGD5Q6ZNL6 1462 aa24.96■■□□□ 1.59
CACNB3-203ENST00000540990 DHX57Q6P158 1386 aaKnown RBP24.95■■□□□ 1.59
CACNB3-203ENST00000540990 PELP1Q8IZL8 1130 aaKnown RBP24.94■■□□□ 1.58
CACNB3-203ENST00000540990 CC2D2AQ9P2K1 1620 aa24.9■■□□□ 1.58
CACNB3-203ENST00000540990 CARMIL1Q5VZK9 1371 aa24.9■■□□□ 1.58
CACNB3-203ENST00000540990 CCNB3Q8WWL7 1395 aa24.86■■□□□ 1.57
CACNB3-203ENST00000540990 TIAM1Q13009 1591 aa24.85■■□□□ 1.57
CACNB3-203ENST00000540990 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.57
CACNB3-203ENST00000540990 DNMBPQ6XZF7 1577 aa24.82■■□□□ 1.56
CACNB3-203ENST00000540990 ABCA10Q8WWZ4 1543 aa24.78■■□□□ 1.56
CACNB3-203ENST00000540990 FHAD1B1AJZ9 1412 aa24.75■■□□□ 1.55
CACNB3-203ENST00000540990 LRRC9Q6ZRR7 1453 aa24.73■■□□□ 1.55
CACNB3-203ENST00000540990 CFAP43Q8NDM7 1665 aa24.72■■□□□ 1.55
CACNB3-203ENST00000540990 MIER1Q8N108 512 aa24.71■■□□□ 1.55
CACNB3-203ENST00000540990 TOPBP1Q92547 1522 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms