RNA–Protein interactions for RNA: ENST00000544284.5

GABARAPL1-213, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3 BASIC

Gene GABARAPL1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-213ENST00000544284 NISCHQ9Y2I1 1504 aa32.55■■■□□ 2.8
GABARAPL1-213ENST00000544284 CCDC180Q9P1Z9 1646 aa29.16■■■□□ 2.26
GABARAPL1-213ENST00000544284 ABCC9O60706 1549 aa28.89■■■□□ 2.22
GABARAPL1-213ENST00000544284 RB1CC1Q8TDY2 1594 aa27.66■■■□□ 2.02
GABARAPL1-213ENST00000544284 NACADO15069 1562 aa27.51■■□□□ 1.99
GABARAPL1-213ENST00000544284 DCAF8L2P0C7V8 631 aa27.41■■□□□ 1.98
GABARAPL1-213ENST00000544284 MYO15BQ96JP2 1530 aa27.18■■□□□ 1.94
GABARAPL1-213ENST00000544284 UNC13AQ9UPW8 1703 aa27.02■■□□□ 1.92
GABARAPL1-213ENST00000544284 ZCCHC6Q5VYS8 1495 aaKnown RBP27■■□□□ 1.91
GABARAPL1-213ENST00000544284 DCAF1Q9Y4B6 1507 aa26.92■■□□□ 1.9
GABARAPL1-213ENST00000544284 PABPN1Q86U42 306 aaKnown RBP eCLIP26.92■■□□□ 1.9
GABARAPL1-213ENST00000544284 DNAJC5BQ9UF47 199 aa26.85■■□□□ 1.89
GABARAPL1-213ENST00000544284 BICRAQ9NZM4 1560 aa26.77■■□□□ 1.88
GABARAPL1-213ENST00000544284 SCRIBQ14160 1630 aa26.54■■□□□ 1.84
GABARAPL1-213ENST00000544284 SHROOM4Q9ULL8 1493 aa26.51■■□□□ 1.83
GABARAPL1-213ENST00000544284 CC2D2AQ9P2K1 1620 aa26.14■■□□□ 1.77
GABARAPL1-213ENST00000544284 EIF4G1Q04637 1599 aaKnown RBP26.13■■□□□ 1.77
GABARAPL1-213ENST00000544284 CECR2Q9BXF3 1484 aa26.03■■□□□ 1.76
GABARAPL1-213ENST00000544284 NCAPD3P42695 1498 aa25.36■■□□□ 1.65
GABARAPL1-213ENST00000544284 SMARCA4P51532 1647 aa25.35■■□□□ 1.65
GABARAPL1-213ENST00000544284 ATAD2BQ9ULI0 1458 aa25.3■■□□□ 1.64
GABARAPL1-213ENST00000544284 SMARCA2P51531 1590 aa25.29■■□□□ 1.64
GABARAPL1-213ENST00000544284 BAZ1AQ9NRL2 1556 aaPredicted RBP25.28■■□□□ 1.64
GABARAPL1-213ENST00000544284 HMGXB3Q12766 1538 aa25.21■■□□□ 1.63
GABARAPL1-213ENST00000544284 PEG3Q9GZU2 1588 aa25.1■■□□□ 1.61
GABARAPL1-213ENST00000544284 BAZ1BQ9UIG0 1483 aaKnown RBP25.1■■□□□ 1.61
GABARAPL1-213ENST00000544284 MROH2BQ7Z745 1585 aa25.05■■□□□ 1.6
GABARAPL1-213ENST00000544284 ERCC6Q03468 1493 aa24.98■■□□□ 1.59
GABARAPL1-213ENST00000544284 NESP48681 1621 aa24.86■■□□□ 1.57
GABARAPL1-213ENST00000544284 CUX2O14529 1486 aa24.85■■□□□ 1.57
GABARAPL1-213ENST00000544284 WIZO95785 1651 aa24.79■■□□□ 1.56
GABARAPL1-213ENST00000544284 LAMC3Q9Y6N6 1575 aa24.79■■□□□ 1.56
GABARAPL1-213ENST00000544284 PDS5BQ9NTI5 1447 aa24.65■■□□□ 1.54
GABARAPL1-213ENST00000544284 RSF1Q96T23 1441 aaPredicted RBP24.61■■□□□ 1.53
GABARAPL1-213ENST00000544284 CADPSQ9ULU8 1353 aa24.61■■□□□ 1.53
GABARAPL1-213ENST00000544284 KIF21AQ7Z4S6 1674 aa24.6■■□□□ 1.53
GABARAPL1-213ENST00000544284 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
GABARAPL1-213ENST00000544284 DNAJC5Q9H3Z4 198 aa24.57■■□□□ 1.52
GABARAPL1-213ENST00000544284 TOP2AP11388 1531 aaKnown RBP24.51■■□□□ 1.51
GABARAPL1-213ENST00000544284 MRC2Q9UBG0 1479 aa24.39■■□□□ 1.5
GABARAPL1-213ENST00000544284 CFTRP13569 1480 aa24.37■■□□□ 1.49
GABARAPL1-213ENST00000544284 CEP164Q9UPV0 1460 aa24.35■■□□□ 1.49
GABARAPL1-213ENST00000544284 FANCD2Q9BXW9 1451 aa24.32■■□□□ 1.48
GABARAPL1-213ENST00000544284 WDR62O43379 1518 aa24.32■■□□□ 1.48
GABARAPL1-213ENST00000544284 PRDM2Q13029 1718 aa24.21■■□□□ 1.47
GABARAPL1-213ENST00000544284 CCDC88BA6NC98 1476 aa24.2■■□□□ 1.47
GABARAPL1-213ENST00000544284 URB2Q14146 1524 aaKnown RBP24.09■■□□□ 1.45
GABARAPL1-213ENST00000544284 ABCC8Q09428 1581 aa23.91■■□□□ 1.42
GABARAPL1-213ENST00000544284 TOPBP1Q92547 1522 aa23.89■■□□□ 1.41
GABARAPL1-213ENST00000544284 IFT140Q96RY7 1462 aa23.86■■□□□ 1.41
GABARAPL1-213ENST00000544284 DNMBPQ6XZF7 1577 aa23.84■■□□□ 1.41
GABARAPL1-213ENST00000544284 OSCARQ8IYS5 282 aa23.76■■□□□ 1.39
GABARAPL1-213ENST00000544284 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
GABARAPL1-213ENST00000544284 SUPT5HO00267 1087 aaKnown RBP23.72■■□□□ 1.39
GABARAPL1-213ENST00000544284 EIF4G3O43432 1585 aaKnown RBP23.67■■□□□ 1.38
GABARAPL1-213ENST00000544284 TARBP1Q13395 1621 aaKnown RBP23.66■■□□□ 1.38
GABARAPL1-213ENST00000544284 POLA1P09884 1462 aaPredicted RBP23.65■■□□□ 1.38
GABARAPL1-213ENST00000544284 TRIM41Q8WV44 630 aa23.6■■□□□ 1.37
GABARAPL1-213ENST00000544284 AQRO60306 1485 aaKnown RBP eCLIP23.57■■□□□ 1.36
GABARAPL1-213ENST00000544284 SOGA1O94964 1423 aa23.57■■□□□ 1.36
GABARAPL1-213ENST00000544284 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
GABARAPL1-213ENST00000544284 FGD5Q6ZNL6 1462 aa23.54■■□□□ 1.36
GABARAPL1-213ENST00000544284 CUX1P39880 1505 aa23.54■■□□□ 1.36
GABARAPL1-213ENST00000544284 WDR97A6NE52 1622 aa23.49■■□□□ 1.35
GABARAPL1-213ENST00000544284 CHD1O14646 1710 aa23.47■■□□□ 1.35
GABARAPL1-213ENST00000544284 TDRD9Q8NDG6 1382 aaKnown RBP23.47■■□□□ 1.35
GABARAPL1-213ENST00000544284 FBLN2P98095 1184 aa23.42■■□□□ 1.34
GABARAPL1-213ENST00000544284 RIMBP3CA6NJZ7 1639 aa23.41■■□□□ 1.34
GABARAPL1-213ENST00000544284 RIMBP3BA6NNM3 1639 aa23.41■■□□□ 1.34
GABARAPL1-213ENST00000544284 RIMBP3Q9UFD9 1639 aa23.41■■□□□ 1.34
GABARAPL1-213ENST00000544284 ARHGEF11O15085 1522 aa23.36■■□□□ 1.33
GABARAPL1-213ENST00000544284 SNAPC4Q5SXM2 1469 aa23.36■■□□□ 1.33
GABARAPL1-213ENST00000544284 GRIN2BQ13224 1484 aa23.34■■□□□ 1.33
GABARAPL1-213ENST00000544284 MAGI1Q96QZ7 1491 aaPredicted RBP23.33■■□□□ 1.33
GABARAPL1-213ENST00000544284 CHMP7Q8WUX9 453 aaPredicted RBP23.29■■□□□ 1.32
GABARAPL1-213ENST00000544284 GAPVD1Q14C86 1478 aa23.29■■□□□ 1.32
GABARAPL1-213ENST00000544284 PBRM1Q86U86 1689 aa23.28■■□□□ 1.32
GABARAPL1-213ENST00000544284 ABCA10Q8WWZ4 1543 aa23.28■■□□□ 1.32
GABARAPL1-213ENST00000544284 TOP2BQ02880 1626 aa23.26■■□□□ 1.31
GABARAPL1-213ENST00000544284 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
GABARAPL1-213ENST00000544284 BIVM-ERCC5R4GMW8 1640 aa23.25■■□□□ 1.31
GABARAPL1-213ENST00000544284 SYNJ2O15056 1496 aa23.24■■□□□ 1.31
GABARAPL1-213ENST00000544284 SYNJ1O43426 1573 aa23.23■■□□□ 1.31
GABARAPL1-213ENST00000544284 ABCA5Q8WWZ7 1642 aa23.23■■□□□ 1.31
GABARAPL1-213ENST00000544284 CYB5RLQ6IPT4 315 aa23.18■■□□□ 1.3
GABARAPL1-213ENST00000544284 CLASP1Q7Z460 1538 aa23.17■■□□□ 1.3
GABARAPL1-213ENST00000544284 ARAP1Q96P48 1450 aa23.11■■□□□ 1.29
GABARAPL1-213ENST00000544284 ADAMTS12P58397 1594 aa23.05■■□□□ 1.28
GABARAPL1-213ENST00000544284 GRIN2AQ12879 1464 aa23.04■■□□□ 1.28
GABARAPL1-213ENST00000544284 ERICH3Q5RHP9 1530 aa23.02■■□□□ 1.28
GABARAPL1-213ENST00000544284 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
GABARAPL1-213ENST00000544284 NUP160Q12769 1436 aa22.93■■□□□ 1.26
GABARAPL1-213ENST00000544284 CEP170Q5SW79 1584 aa22.93■■□□□ 1.26
GABARAPL1-213ENST00000544284 TRHP20396 242 aaPredicted RBP22.88■■□□□ 1.25
GABARAPL1-213ENST00000544284 SHROOM2Q13796 1616 aa22.82■■□□□ 1.24
GABARAPL1-213ENST00000544284 KIF27Q86VH2 1401 aa22.82■■□□□ 1.24
GABARAPL1-213ENST00000544284 ERCC6L2Q5T890 1561 aa22.8■■□□□ 1.24
GABARAPL1-213ENST00000544284 CUL7Q14999 1698 aa22.75■■□□□ 1.23
GABARAPL1-213ENST00000544284 IGF1RP08069 1367 aa22.74■■□□□ 1.23
GABARAPL1-213ENST00000544284 JPH4Q96JJ6 628 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms