Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.34□□□□□ -0.43
COL8A2P25067 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.34□□□□□ -0.43
COL8A2P25067 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.34□□□□□ -0.43
COL8A2P25067 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.34□□□□□ -0.43
COL8A2P25067 RHOQP1-201ENST00000555758 579 ntBASIC12.34□□□□□ -0.43
COL8A2P25067 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.34□□□□□ -0.43
COL8A2P25067 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.34□□□□□ -0.43
COL8A2P25067 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.34□□□□□ -0.43
COL8A2P25067 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.34□□□□□ -0.43
COL8A2P25067 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.34□□□□□ -0.43
COL8A2P25067 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.34□□□□□ -0.43
COL8A2P25067 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.34□□□□□ -0.43
COL8A2P25067 AC140479.7-201ENST00000636301 2332 ntBASIC12.34□□□□□ -0.43
COL8A2P25067 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
COL8A2P25067 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.34□□□□□ -0.43
COL8A2P25067 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.34□□□□□ -0.43
COL8A2P25067 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
COL8A2P25067 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.34□□□□□ -0.43
COL8A2P25067 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
COL8A2P25067 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.34□□□□□ -0.43
COL8A2P25067 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.34□□□□□ -0.43
COL8A2P25067 AC139712.1-201ENST00000378256 1875 ntBASIC12.34□□□□□ -0.43
COL8A2P25067 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COL8A2P25067 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
COL8A2P25067 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
COL8A2P25067 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
COL8A2P25067 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
COL8A2P25067 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
COL8A2P25067 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
COL8A2P25067 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 AC041040.2-201ENST00000622926 2899 ntBASIC12.33□□□□□ -0.44
COL8A2P25067 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
COL8A2P25067 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
COL8A2P25067 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.33□□□□□ -0.44
COL8A2P25067 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
COL8A2P25067 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
COL8A2P25067 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.33□□□□□ -0.44
COL8A2P25067 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.33□□□□□ -0.44
COL8A2P25067 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.33□□□□□ -0.44
COL8A2P25067 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.33□□□□□ -0.44
COL8A2P25067 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.33□□□□□ -0.44
COL8A2P25067 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.33□□□□□ -0.44
COL8A2P25067 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.33□□□□□ -0.44
COL8A2P25067 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.33□□□□□ -0.44
COL8A2P25067 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.33□□□□□ -0.44
COL8A2P25067 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
COL8A2P25067 NAP1L6-202ENST00000641404 1222 ntBASIC12.33□□□□□ -0.44
COL8A2P25067 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 CICP14-201ENST00000629111 2732 ntBASIC12.33□□□□□ -0.44
COL8A2P25067 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
COL8A2P25067 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.33□□□□□ -0.44
COL8A2P25067 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.33□□□□□ -0.44
COL8A2P25067 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.33□□□□□ -0.44
COL8A2P25067 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
COL8A2P25067 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COL8A2P25067 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
COL8A2P25067 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.32□□□□□ -0.44
COL8A2P25067 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 KRT8P28-201ENST00000433288 1390 ntBASIC12.32□□□□□ -0.44
COL8A2P25067 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.32□□□□□ -0.44
COL8A2P25067 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COL8A2P25067 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms