Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
SPASTQ9UBP0 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 AC092506.1-202ENST00000401022 528 ntBASIC14.6□□□□□ -0.07
SPASTQ9UBP0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 RN7SL11P-201ENST00000471305 293 ntBASIC14.6□□□□□ -0.07
SPASTQ9UBP0 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 AC245884.6-201ENST00000515672 1067 ntBASIC14.6□□□□□ -0.07
SPASTQ9UBP0 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 AC005324.6-201ENST00000587972 613 ntBASIC14.6□□□□□ -0.07
SPASTQ9UBP0 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 AP001505.2-201ENST00000616815 443 ntBASIC14.6□□□□□ -0.07
SPASTQ9UBP0 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPASTQ9UBP0 AC139749.1-202ENST00000617529 3139 ntBASIC14.59□□□□□ -0.07
SPASTQ9UBP0 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 E2F3P2-201ENST00000447755 1422 ntBASIC14.59□□□□□ -0.07
SPASTQ9UBP0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SPASTQ9UBP0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms