RNA–Protein interactions for RNA: ENST00000540912.1

AP003065.1-201, humanhuman

TSL 4 BASIC

Gene AP003065.1, Length 562 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003065.1-201ENST00000540912 NISCHQ9Y2I1 1504 aa35.58■■■■□ 3.29
AP003065.1-201ENST00000540912 CCDC180Q9P1Z9 1646 aa31.62■■■□□ 2.65
AP003065.1-201ENST00000540912 ABCC9O60706 1549 aa30.83■■■□□ 2.53
AP003065.1-201ENST00000540912 RB1CC1Q8TDY2 1594 aa29.71■■■□□ 2.35
AP003065.1-201ENST00000540912 NACADO15069 1562 aa29.7■■■□□ 2.35
AP003065.1-201ENST00000540912 ZCCHC6Q5VYS8 1495 aaKnown RBP29.67■■■□□ 2.34
AP003065.1-201ENST00000540912 DCAF8L2P0C7V8 631 aa29.63■■■□□ 2.33
AP003065.1-201ENST00000540912 MYO15BQ96JP2 1530 aa29.56■■■□□ 2.32
AP003065.1-201ENST00000540912 DCAF1Q9Y4B6 1507 aa29.46■■■□□ 2.31
AP003065.1-201ENST00000540912 UNC13AQ9UPW8 1703 aa29.05■■■□□ 2.24
AP003065.1-201ENST00000540912 SCRIBQ14160 1630 aa28.83■■■□□ 2.21
AP003065.1-201ENST00000540912 BICRAQ9NZM4 1560 aa28.82■■■□□ 2.2
AP003065.1-201ENST00000540912 PABPN1Q86U42 306 aaKnown RBP eCLIP28.8■■■□□ 2.2
AP003065.1-201ENST00000540912 SHROOM4Q9ULL8 1493 aa28.54■■■□□ 2.16
AP003065.1-201ENST00000540912 DNAJC5BQ9UF47 199 aa28.21■■■□□ 2.11
AP003065.1-201ENST00000540912 EIF4G1Q04637 1599 aaKnown RBP28.04■■■□□ 2.08
AP003065.1-201ENST00000540912 CC2D2AQ9P2K1 1620 aa27.9■■■□□ 2.06
AP003065.1-201ENST00000540912 CECR2Q9BXF3 1484 aa27.7■■■□□ 2.03
AP003065.1-201ENST00000540912 SMARCA4P51532 1647 aa27.6■■■□□ 2.01
AP003065.1-201ENST00000540912 BAZ1AQ9NRL2 1556 aaPredicted RBP27.58■■■□□ 2.01
AP003065.1-201ENST00000540912 ATAD2BQ9ULI0 1458 aa27.42■■□□□ 1.98
AP003065.1-201ENST00000540912 MROH2BQ7Z745 1585 aa27.42■■□□□ 1.98
AP003065.1-201ENST00000540912 SMARCA2P51531 1590 aa27.4■■□□□ 1.98
AP003065.1-201ENST00000540912 NCAPD3P42695 1498 aa27.4■■□□□ 1.98
AP003065.1-201ENST00000540912 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
AP003065.1-201ENST00000540912 HMGXB3Q12766 1538 aa27.28■■□□□ 1.96
AP003065.1-201ENST00000540912 BAZ1BQ9UIG0 1483 aaKnown RBP27.19■■□□□ 1.94
AP003065.1-201ENST00000540912 RSF1Q96T23 1441 aaPredicted RBP27.14■■□□□ 1.93
AP003065.1-201ENST00000540912 WIZO95785 1651 aa27.13■■□□□ 1.93
AP003065.1-201ENST00000540912 TOP2AP11388 1531 aaKnown RBP26.86■■□□□ 1.89
AP003065.1-201ENST00000540912 NESP48681 1621 aa26.7■■□□□ 1.86
AP003065.1-201ENST00000540912 LAMC3Q9Y6N6 1575 aa26.67■■□□□ 1.86
AP003065.1-201ENST00000540912 CADPSQ9ULU8 1353 aa26.59■■□□□ 1.85
AP003065.1-201ENST00000540912 ERCC6Q03468 1493 aa26.55■■□□□ 1.84
AP003065.1-201ENST00000540912 CCDC88BA6NC98 1476 aa26.53■■□□□ 1.84
AP003065.1-201ENST00000540912 PDS5BQ9NTI5 1447 aa26.47■■□□□ 1.83
AP003065.1-201ENST00000540912 SUPT5HO00267 1087 aaKnown RBP26.46■■□□□ 1.83
AP003065.1-201ENST00000540912 CFTRP13569 1480 aa26.46■■□□□ 1.83
AP003065.1-201ENST00000540912 KIF21AQ7Z4S6 1674 aa26.41■■□□□ 1.82
AP003065.1-201ENST00000540912 THOC2Q8NI27 1593 aaKnown RBP26.3■■□□□ 1.8
AP003065.1-201ENST00000540912 PRDM2Q13029 1718 aa26.29■■□□□ 1.8
AP003065.1-201ENST00000540912 FANCD2Q9BXW9 1451 aa26.29■■□□□ 1.8
AP003065.1-201ENST00000540912 CUX2O14529 1486 aa26.27■■□□□ 1.8
AP003065.1-201ENST00000540912 CEP164Q9UPV0 1460 aa26.25■■□□□ 1.79
AP003065.1-201ENST00000540912 MRC2Q9UBG0 1479 aa26.2■■□□□ 1.78
AP003065.1-201ENST00000540912 WDR62O43379 1518 aa26.13■■□□□ 1.77
AP003065.1-201ENST00000540912 URB2Q14146 1524 aaKnown RBP26.04■■□□□ 1.76
AP003065.1-201ENST00000540912 ABCC8Q09428 1581 aa25.89■■□□□ 1.73
AP003065.1-201ENST00000540912 TOPBP1Q92547 1522 aa25.88■■□□□ 1.73
AP003065.1-201ENST00000540912 DNMBPQ6XZF7 1577 aa25.86■■□□□ 1.73
AP003065.1-201ENST00000540912 CUX1P39880 1505 aa25.73■■□□□ 1.71
AP003065.1-201ENST00000540912 IFT140Q96RY7 1462 aa25.71■■□□□ 1.71
AP003065.1-201ENST00000540912 POLA1P09884 1462 aaPredicted RBP25.67■■□□□ 1.7
AP003065.1-201ENST00000540912 FGD5Q6ZNL6 1462 aa25.62■■□□□ 1.69
AP003065.1-201ENST00000540912 TARBP1Q13395 1621 aaKnown RBP25.61■■□□□ 1.69
AP003065.1-201ENST00000540912 ZNF608Q9ULD9 1512 aaPredicted RBP25.58■■□□□ 1.68
AP003065.1-201ENST00000540912 WRNQ14191 1432 aaPredicted RBP eCLIP25.57■■□□□ 1.68
AP003065.1-201ENST00000540912 SOGA1O94964 1423 aa25.55■■□□□ 1.68
AP003065.1-201ENST00000540912 RAD54L2Q9Y4B4 1467 aa25.55■■□□□ 1.68
AP003065.1-201ENST00000540912 TOP2BQ02880 1626 aa25.53■■□□□ 1.68
AP003065.1-201ENST00000540912 BIVM-ERCC5R4GMW8 1640 aa25.53■■□□□ 1.68
AP003065.1-201ENST00000540912 SYNJ1O43426 1573 aa25.52■■□□□ 1.68
AP003065.1-201ENST00000540912 EIF4G3O43432 1585 aaKnown RBP25.49■■□□□ 1.67
AP003065.1-201ENST00000540912 AQRO60306 1485 aaKnown RBP eCLIP25.43■■□□□ 1.66
AP003065.1-201ENST00000540912 WDR97A6NE52 1622 aa25.43■■□□□ 1.66
AP003065.1-201ENST00000540912 TDRD9Q8NDG6 1382 aaKnown RBP25.4■■□□□ 1.66
AP003065.1-201ENST00000540912 ABCA10Q8WWZ4 1543 aa25.38■■□□□ 1.65
AP003065.1-201ENST00000540912 DNAJC5Q9H3Z4 198 aa25.35■■□□□ 1.65
AP003065.1-201ENST00000540912 ABCA5Q8WWZ7 1642 aa25.29■■□□□ 1.64
AP003065.1-201ENST00000540912 GAPVD1Q14C86 1478 aa25.27■■□□□ 1.64
AP003065.1-201ENST00000540912 GRIN2BQ13224 1484 aa25.26■■□□□ 1.63
AP003065.1-201ENST00000540912 PBRM1Q86U86 1689 aa25.23■■□□□ 1.63
AP003065.1-201ENST00000540912 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
AP003065.1-201ENST00000540912 MAGI1Q96QZ7 1491 aaPredicted RBP25.19■■□□□ 1.62
AP003065.1-201ENST00000540912 OSCARQ8IYS5 282 aa25.17■■□□□ 1.62
AP003065.1-201ENST00000540912 CHD1O14646 1710 aa25.15■■□□□ 1.62
AP003065.1-201ENST00000540912 SYNJ2O15056 1496 aa25.09■■□□□ 1.61
AP003065.1-201ENST00000540912 ERICH3Q5RHP9 1530 aa25.08■■□□□ 1.61
AP003065.1-201ENST00000540912 FBLN2P98095 1184 aa25.08■■□□□ 1.61
AP003065.1-201ENST00000540912 KIF27Q86VH2 1401 aa25.04■■□□□ 1.6
AP003065.1-201ENST00000540912 CHMP7Q8WUX9 453 aaPredicted RBP25.04■■□□□ 1.6
AP003065.1-201ENST00000540912 ADAMTS12P58397 1594 aa25.04■■□□□ 1.6
AP003065.1-201ENST00000540912 TRIM41Q8WV44 630 aa25■■□□□ 1.59
AP003065.1-201ENST00000540912 FHAD1B1AJZ9 1412 aa24.99■■□□□ 1.59
AP003065.1-201ENST00000540912 GRIN2AQ12879 1464 aa24.94■■□□□ 1.58
AP003065.1-201ENST00000540912 IGF1RP08069 1367 aa24.93■■□□□ 1.58
AP003065.1-201ENST00000540912 CLASP1Q7Z460 1538 aa24.89■■□□□ 1.57
AP003065.1-201ENST00000540912 CUL7Q14999 1698 aa24.88■■□□□ 1.57
AP003065.1-201ENST00000540912 RUSC2Q8N2Y8 1516 aa24.83■■□□□ 1.57
AP003065.1-201ENST00000540912 NUP160Q12769 1436 aa24.83■■□□□ 1.57
AP003065.1-201ENST00000540912 CEP170Q5SW79 1584 aa24.81■■□□□ 1.56
AP003065.1-201ENST00000540912 ARHGEF11O15085 1522 aa24.79■■□□□ 1.56
AP003065.1-201ENST00000540912 RIMBP3CA6NJZ7 1639 aa24.79■■□□□ 1.56
AP003065.1-201ENST00000540912 RIMBP3BA6NNM3 1639 aa24.79■■□□□ 1.56
AP003065.1-201ENST00000540912 RIMBP3Q9UFD9 1639 aa24.79■■□□□ 1.56
AP003065.1-201ENST00000540912 CARMIL1Q5VZK9 1371 aa24.78■■□□□ 1.56
AP003065.1-201ENST00000540912 CHIC1Q5VXU3 224 aa24.76■■□□□ 1.55
AP003065.1-201ENST00000540912 SHROOM2Q13796 1616 aa24.64■■□□□ 1.54
AP003065.1-201ENST00000540912 RAPGEF2Q9Y4G8 1499 aa24.64■■□□□ 1.54
AP003065.1-201ENST00000540912 EEA1Q15075 1411 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms