RNA–Protein interactions for RNA: ENST00000262829.11

RBFOX2-201, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-201ENST00000262829 NISCHQ9Y2I1 1504 aa35.82■■■■□ 3.33
RBFOX2-201ENST00000262829 AEBP2Q6ZN18 517 aaPredicted RBP32.9■■■□□ 2.86
RBFOX2-201ENST00000262829 CCDC180Q9P1Z9 1646 aa31.9■■■□□ 2.7
RBFOX2-201ENST00000262829 ABCC9O60706 1549 aa31.76■■■□□ 2.68
RBFOX2-201ENST00000262829 CHIC1Q5VXU3 224 aa30.92■■■□□ 2.54
RBFOX2-201ENST00000262829 DCAF8L2P0C7V8 631 aa30.32■■■□□ 2.44
RBFOX2-201ENST00000262829 RB1CC1Q8TDY2 1594 aa30.24■■■□□ 2.43
RBFOX2-201ENST00000262829 NACADO15069 1562 aa30.09■■■□□ 2.41
RBFOX2-201ENST00000262829 ZCCHC6Q5VYS8 1495 aaKnown RBP29.75■■■□□ 2.35
RBFOX2-201ENST00000262829 MYO15BQ96JP2 1530 aa29.7■■■□□ 2.35
RBFOX2-201ENST00000262829 PABPN1Q86U42 306 aaKnown RBP eCLIP29.7■■■□□ 2.34
RBFOX2-201ENST00000262829 UNC13AQ9UPW8 1703 aa29.64■■■□□ 2.34
RBFOX2-201ENST00000262829 DNAJC5BQ9UF47 199 aa29.55■■■□□ 2.32
RBFOX2-201ENST00000262829 DCAF1Q9Y4B6 1507 aa29.49■■■□□ 2.31
RBFOX2-201ENST00000262829 BICRAQ9NZM4 1560 aa29.41■■■□□ 2.3
RBFOX2-201ENST00000262829 SCRIBQ14160 1630 aa29.28■■■□□ 2.28
RBFOX2-201ENST00000262829 SHROOM4Q9ULL8 1493 aa28.84■■■□□ 2.21
RBFOX2-201ENST00000262829 CC2D2AQ9P2K1 1620 aa28.65■■■□□ 2.18
RBFOX2-201ENST00000262829 EIF4G1Q04637 1599 aaKnown RBP28.64■■■□□ 2.18
RBFOX2-201ENST00000262829 CECR2Q9BXF3 1484 aa28.51■■■□□ 2.15
RBFOX2-201ENST00000262829 SENP3Q9H4L4 574 aaPredicted RBP28.3■■■□□ 2.12
RBFOX2-201ENST00000262829 SMARCA4P51532 1647 aa27.88■■■□□ 2.05
RBFOX2-201ENST00000262829 ATAD2BQ9ULI0 1458 aa27.82■■■□□ 2.04
RBFOX2-201ENST00000262829 NCAPD3P42695 1498 aa27.8■■■□□ 2.04
RBFOX2-201ENST00000262829 PHF23Q9BUL5 403 aaPredicted RBP27.78■■■□□ 2.04
RBFOX2-201ENST00000262829 BAZ1AQ9NRL2 1556 aaPredicted RBP27.74■■■□□ 2.03
RBFOX2-201ENST00000262829 SMARCA2P51531 1590 aa27.7■■■□□ 2.03
RBFOX2-201ENST00000262829 MROH2BQ7Z745 1585 aa27.68■■■□□ 2.02
RBFOX2-201ENST00000262829 HMGXB3Q12766 1538 aa27.6■■■□□ 2.01
RBFOX2-201ENST00000262829 BAZ1BQ9UIG0 1483 aaKnown RBP27.58■■■□□ 2.01
RBFOX2-201ENST00000262829 PEG3Q9GZU2 1588 aa27.52■■■□□ 2
RBFOX2-201ENST00000262829 NESP48681 1621 aa27.41■■□□□ 1.98
RBFOX2-201ENST00000262829 WIZO95785 1651 aa27.38■■□□□ 1.97
RBFOX2-201ENST00000262829 ERCC6Q03468 1493 aa27.35■■□□□ 1.97
RBFOX2-201ENST00000262829 RSF1Q96T23 1441 aaPredicted RBP27.21■■□□□ 1.95
RBFOX2-201ENST00000262829 LAMC3Q9Y6N6 1575 aa27.1■■□□□ 1.93
RBFOX2-201ENST00000262829 CUX2O14529 1486 aa27.06■■□□□ 1.92
RBFOX2-201ENST00000262829 CADPSQ9ULU8 1353 aa27.01■■□□□ 1.91
RBFOX2-201ENST00000262829 KIF21AQ7Z4S6 1674 aa27.01■■□□□ 1.91
RBFOX2-201ENST00000262829 TOP2AP11388 1531 aaKnown RBP26.97■■□□□ 1.91
RBFOX2-201ENST00000262829 PDS5BQ9NTI5 1447 aa26.96■■□□□ 1.91
RBFOX2-201ENST00000262829 THOC2Q8NI27 1593 aaKnown RBP26.94■■□□□ 1.9
RBFOX2-201ENST00000262829 CFTRP13569 1480 aa26.76■■□□□ 1.87
RBFOX2-201ENST00000262829 DNAJC5Q9H3Z4 198 aa26.75■■□□□ 1.87
RBFOX2-201ENST00000262829 CCDC88BA6NC98 1476 aa26.73■■□□□ 1.87
RBFOX2-201ENST00000262829 FANCD2Q9BXW9 1451 aa26.73■■□□□ 1.87
RBFOX2-201ENST00000262829 MRC2Q9UBG0 1479 aa26.73■■□□□ 1.87
RBFOX2-201ENST00000262829 CEP164Q9UPV0 1460 aa26.7■■□□□ 1.87
RBFOX2-201ENST00000262829 WDR62O43379 1518 aa26.63■■□□□ 1.85
RBFOX2-201ENST00000262829 URB2Q14146 1524 aaKnown RBP26.51■■□□□ 1.83
RBFOX2-201ENST00000262829 PRDM2Q13029 1718 aa26.49■■□□□ 1.83
RBFOX2-201ENST00000262829 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.83
RBFOX2-201ENST00000262829 FOXD1Q16676 465 aa26.31■■□□□ 1.8
RBFOX2-201ENST00000262829 TOPBP1Q92547 1522 aa26.27■■□□□ 1.8
RBFOX2-201ENST00000262829 ZNF608Q9ULD9 1512 aaPredicted RBP26.17■■□□□ 1.78
RBFOX2-201ENST00000262829 DNMBPQ6XZF7 1577 aa26.16■■□□□ 1.78
RBFOX2-201ENST00000262829 IFT140Q96RY7 1462 aa26.13■■□□□ 1.77
RBFOX2-201ENST00000262829 ABCC8Q09428 1581 aa26.12■■□□□ 1.77
RBFOX2-201ENST00000262829 POLA1P09884 1462 aaPredicted RBP26.02■■□□□ 1.76
RBFOX2-201ENST00000262829 RAD54L2Q9Y4B4 1467 aa26■■□□□ 1.75
RBFOX2-201ENST00000262829 TARBP1Q13395 1621 aaKnown RBP25.99■■□□□ 1.75
RBFOX2-201ENST00000262829 AQRO60306 1485 aaKnown RBP eCLIP25.99■■□□□ 1.75
RBFOX2-201ENST00000262829 OSCARQ8IYS5 282 aa25.98■■□□□ 1.75
RBFOX2-201ENST00000262829 EIF4G3O43432 1585 aaKnown RBP25.98■■□□□ 1.75
RBFOX2-201ENST00000262829 CUX1P39880 1505 aa25.98■■□□□ 1.75
RBFOX2-201ENST00000262829 FGD5Q6ZNL6 1462 aa25.93■■□□□ 1.74
RBFOX2-201ENST00000262829 SOGA1O94964 1423 aa25.93■■□□□ 1.74
RBFOX2-201ENST00000262829 TDRD9Q8NDG6 1382 aaKnown RBP25.9■■□□□ 1.74
RBFOX2-201ENST00000262829 TRIM41Q8WV44 630 aa25.87■■□□□ 1.73
RBFOX2-201ENST00000262829 FBLN2P98095 1184 aa25.81■■□□□ 1.72
RBFOX2-201ENST00000262829 CHD1O14646 1710 aa25.74■■□□□ 1.71
RBFOX2-201ENST00000262829 SNAPC4Q5SXM2 1469 aa25.68■■□□□ 1.7
RBFOX2-201ENST00000262829 WDR97A6NE52 1622 aa25.67■■□□□ 1.7
RBFOX2-201ENST00000262829 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
RBFOX2-201ENST00000262829 WRNQ14191 1432 aaPredicted RBP eCLIP25.65■■□□□ 1.7
RBFOX2-201ENST00000262829 RIMBP3CA6NJZ7 1639 aa25.62■■□□□ 1.69
RBFOX2-201ENST00000262829 RIMBP3BA6NNM3 1639 aa25.62■■□□□ 1.69
RBFOX2-201ENST00000262829 RIMBP3Q9UFD9 1639 aa25.62■■□□□ 1.69
RBFOX2-201ENST00000262829 GRIN2BQ13224 1484 aa25.61■■□□□ 1.69
RBFOX2-201ENST00000262829 GAPVD1Q14C86 1478 aa25.6■■□□□ 1.69
RBFOX2-201ENST00000262829 TOP2BQ02880 1626 aa25.6■■□□□ 1.69
RBFOX2-201ENST00000262829 ABCA10Q8WWZ4 1543 aa25.59■■□□□ 1.69
RBFOX2-201ENST00000262829 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.69
RBFOX2-201ENST00000262829 BIVM-ERCC5R4GMW8 1640 aa25.58■■□□□ 1.69
RBFOX2-201ENST00000262829 PBRM1Q86U86 1689 aa25.56■■□□□ 1.68
RBFOX2-201ENST00000262829 ARHGEF11O15085 1522 aa25.56■■□□□ 1.68
RBFOX2-201ENST00000262829 MAGI1Q96QZ7 1491 aaPredicted RBP25.54■■□□□ 1.68
RBFOX2-201ENST00000262829 ABCA5Q8WWZ7 1642 aa25.54■■□□□ 1.68
RBFOX2-201ENST00000262829 SYNJ2O15056 1496 aa25.49■■□□□ 1.67
RBFOX2-201ENST00000262829 CYB5RLQ6IPT4 315 aa25.45■■□□□ 1.66
RBFOX2-201ENST00000262829 CLASP1Q7Z460 1538 aa25.39■■□□□ 1.66
RBFOX2-201ENST00000262829 ARAP1Q96P48 1450 aa25.35■■□□□ 1.65
RBFOX2-201ENST00000262829 ADAMTS12P58397 1594 aa25.33■■□□□ 1.64
RBFOX2-201ENST00000262829 GRIN2AQ12879 1464 aa25.3■■□□□ 1.64
RBFOX2-201ENST00000262829 ERICH3Q5RHP9 1530 aa25.26■■□□□ 1.63
RBFOX2-201ENST00000262829 FHAD1B1AJZ9 1412 aa25.25■■□□□ 1.63
RBFOX2-201ENST00000262829 CEP170Q5SW79 1584 aa25.23■■□□□ 1.63
RBFOX2-201ENST00000262829 NUP160Q12769 1436 aa25.17■■□□□ 1.62
RBFOX2-201ENST00000262829 ERCC6L2Q5T890 1561 aa25.15■■□□□ 1.62
RBFOX2-201ENST00000262829 KIF27Q86VH2 1401 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms