Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 RPL8P2-201ENST00000430538 502 ntBASIC15.82■□□□□ 0.12
CDC42EP1Q00587 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 AC006480.2-201ENST00000609770 1337 ntBASIC15.82■□□□□ 0.12
CDC42EP1Q00587 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 MTHFR-210ENST00000641407 2387 ntBASIC15.82■□□□□ 0.12
CDC42EP1Q00587 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC42EP1Q00587 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 AL807761.2-201ENST00000422849 729 ntBASIC15.81■□□□□ 0.12
CDC42EP1Q00587 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 CAP2P1-201ENST00000557743 1390 ntBASIC15.81■□□□□ 0.12
CDC42EP1Q00587 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42EP1Q00587 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 RPS9P1-201ENST00000419943 583 ntBASIC15.8■□□□□ 0.12
CDC42EP1Q00587 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 CHCHD2P9-201ENST00000461726 456 ntBASIC15.8■□□□□ 0.12
CDC42EP1Q00587 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 MIR4722-201ENST00000578292 60 ntBASIC15.8■□□□□ 0.12
CDC42EP1Q00587 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 AC007326.1-201ENST00000604539 458 ntBASIC15.8■□□□□ 0.12
CDC42EP1Q00587 AC005632.3-201ENST00000605544 308 ntBASIC15.8■□□□□ 0.12
CDC42EP1Q00587 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.8■□□□□ 0.12
CDC42EP1Q00587 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDC42EP1Q00587 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms