RNA–Protein interactions for RNA: ENST00000461726.1

CHCHD2P9-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 9, humanhuman

BASIC

Gene CHCHD2P9, Length 456 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2P9-201ENST00000461726 NISCHQ9Y2I1 1504 aa34.59■■■■□ 3.13
CHCHD2P9-201ENST00000461726 CCDC180Q9P1Z9 1646 aa30.98■■■□□ 2.55
CHCHD2P9-201ENST00000461726 ABCC9O60706 1549 aa30.51■■■□□ 2.47
CHCHD2P9-201ENST00000461726 RB1CC1Q8TDY2 1594 aa29.3■■■□□ 2.28
CHCHD2P9-201ENST00000461726 NACADO15069 1562 aa29.19■■■□□ 2.26
CHCHD2P9-201ENST00000461726 DCAF8L2P0C7V8 631 aa28.99■■■□□ 2.23
CHCHD2P9-201ENST00000461726 MYO15BQ96JP2 1530 aa28.93■■■□□ 2.22
CHCHD2P9-201ENST00000461726 ZCCHC6Q5VYS8 1495 aaKnown RBP28.74■■■□□ 2.19
CHCHD2P9-201ENST00000461726 DCAF1Q9Y4B6 1507 aa28.66■■■□□ 2.18
CHCHD2P9-201ENST00000461726 UNC13AQ9UPW8 1703 aa28.56■■■□□ 2.16
CHCHD2P9-201ENST00000461726 PABPN1Q86U42 306 aaKnown RBP eCLIP28.41■■■□□ 2.14
CHCHD2P9-201ENST00000461726 BICRAQ9NZM4 1560 aa28.33■■■□□ 2.13
CHCHD2P9-201ENST00000461726 DNAJC5BQ9UF47 199 aa28.21■■■□□ 2.11
CHCHD2P9-201ENST00000461726 SHROOM4Q9ULL8 1493 aa28.16■■■□□ 2.1
CHCHD2P9-201ENST00000461726 SCRIBQ14160 1630 aa28.14■■■□□ 2.1
CHCHD2P9-201ENST00000461726 EIF4G1Q04637 1599 aaKnown RBP27.65■■■□□ 2.02
CHCHD2P9-201ENST00000461726 CC2D2AQ9P2K1 1620 aa27.61■■■□□ 2.01
CHCHD2P9-201ENST00000461726 CECR2Q9BXF3 1484 aa27.49■■□□□ 1.99
CHCHD2P9-201ENST00000461726 SMARCA4P51532 1647 aa26.92■■□□□ 1.9
CHCHD2P9-201ENST00000461726 NCAPD3P42695 1498 aa26.9■■□□□ 1.9
CHCHD2P9-201ENST00000461726 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
CHCHD2P9-201ENST00000461726 SMARCA2P51531 1590 aa26.86■■□□□ 1.89
CHCHD2P9-201ENST00000461726 ATAD2BQ9ULI0 1458 aa26.84■■□□□ 1.89
CHCHD2P9-201ENST00000461726 HMGXB3Q12766 1538 aa26.76■■□□□ 1.87
CHCHD2P9-201ENST00000461726 PEG3Q9GZU2 1588 aa26.68■■□□□ 1.86
CHCHD2P9-201ENST00000461726 BAZ1BQ9UIG0 1483 aaKnown RBP26.63■■□□□ 1.85
CHCHD2P9-201ENST00000461726 MROH2BQ7Z745 1585 aa26.61■■□□□ 1.85
CHCHD2P9-201ENST00000461726 ERCC6Q03468 1493 aa26.39■■□□□ 1.82
CHCHD2P9-201ENST00000461726 WIZO95785 1651 aa26.31■■□□□ 1.8
CHCHD2P9-201ENST00000461726 NESP48681 1621 aa26.28■■□□□ 1.8
CHCHD2P9-201ENST00000461726 LAMC3Q9Y6N6 1575 aa26.27■■□□□ 1.8
CHCHD2P9-201ENST00000461726 CUX2O14529 1486 aa26.25■■□□□ 1.79
CHCHD2P9-201ENST00000461726 RSF1Q96T23 1441 aaPredicted RBP26.2■■□□□ 1.78
CHCHD2P9-201ENST00000461726 PDS5BQ9NTI5 1447 aa26.11■■□□□ 1.77
CHCHD2P9-201ENST00000461726 CADPSQ9ULU8 1353 aa26.09■■□□□ 1.77
CHCHD2P9-201ENST00000461726 TOP2AP11388 1531 aaKnown RBP26.07■■□□□ 1.76
CHCHD2P9-201ENST00000461726 THOC2Q8NI27 1593 aaKnown RBP26.01■■□□□ 1.75
CHCHD2P9-201ENST00000461726 KIF21AQ7Z4S6 1674 aa26■■□□□ 1.75
CHCHD2P9-201ENST00000461726 CFTRP13569 1480 aa25.86■■□□□ 1.73
CHCHD2P9-201ENST00000461726 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
CHCHD2P9-201ENST00000461726 CEP164Q9UPV0 1460 aa25.81■■□□□ 1.72
CHCHD2P9-201ENST00000461726 FANCD2Q9BXW9 1451 aa25.79■■□□□ 1.72
CHCHD2P9-201ENST00000461726 DNAJC5Q9H3Z4 198 aa25.78■■□□□ 1.72
CHCHD2P9-201ENST00000461726 WDR62O43379 1518 aa25.76■■□□□ 1.71
CHCHD2P9-201ENST00000461726 CCDC88BA6NC98 1476 aa25.72■■□□□ 1.71
CHCHD2P9-201ENST00000461726 PRDM2Q13029 1718 aa25.7■■□□□ 1.7
CHCHD2P9-201ENST00000461726 URB2Q14146 1524 aaKnown RBP25.52■■□□□ 1.68
CHCHD2P9-201ENST00000461726 ABCC8Q09428 1581 aa25.39■■□□□ 1.66
CHCHD2P9-201ENST00000461726 TOPBP1Q92547 1522 aa25.33■■□□□ 1.65
CHCHD2P9-201ENST00000461726 DNMBPQ6XZF7 1577 aa25.31■■□□□ 1.64
CHCHD2P9-201ENST00000461726 IFT140Q96RY7 1462 aa25.29■■□□□ 1.64
CHCHD2P9-201ENST00000461726 SUPT5HO00267 1087 aaKnown RBP25.26■■□□□ 1.63
CHCHD2P9-201ENST00000461726 ZNF608Q9ULD9 1512 aaPredicted RBP25.12■■□□□ 1.61
CHCHD2P9-201ENST00000461726 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
CHCHD2P9-201ENST00000461726 OSCARQ8IYS5 282 aa25.08■■□□□ 1.61
CHCHD2P9-201ENST00000461726 TARBP1Q13395 1621 aaKnown RBP25.08■■□□□ 1.6
CHCHD2P9-201ENST00000461726 EIF4G3O43432 1585 aaKnown RBP25.06■■□□□ 1.6
CHCHD2P9-201ENST00000461726 SOGA1O94964 1423 aa24.99■■□□□ 1.59
CHCHD2P9-201ENST00000461726 CUX1P39880 1505 aa24.99■■□□□ 1.59
CHCHD2P9-201ENST00000461726 FGD5Q6ZNL6 1462 aa24.98■■□□□ 1.59
CHCHD2P9-201ENST00000461726 WDR97A6NE52 1622 aa24.97■■□□□ 1.59
CHCHD2P9-201ENST00000461726 AQRO60306 1485 aaKnown RBP eCLIP24.95■■□□□ 1.58
CHCHD2P9-201ENST00000461726 RAD54L2Q9Y4B4 1467 aa24.95■■□□□ 1.58
CHCHD2P9-201ENST00000461726 TDRD9Q8NDG6 1382 aaKnown RBP24.85■■□□□ 1.57
CHCHD2P9-201ENST00000461726 CHD1O14646 1710 aa24.81■■□□□ 1.56
CHCHD2P9-201ENST00000461726 GRIN2BQ13224 1484 aa24.77■■□□□ 1.56
CHCHD2P9-201ENST00000461726 MAGI1Q96QZ7 1491 aaPredicted RBP24.76■■□□□ 1.55
CHCHD2P9-201ENST00000461726 ABCA10Q8WWZ4 1543 aa24.76■■□□□ 1.55
CHCHD2P9-201ENST00000461726 TRIM41Q8WV44 630 aa24.75■■□□□ 1.55
CHCHD2P9-201ENST00000461726 WRNQ14191 1432 aaPredicted RBP eCLIP24.75■■□□□ 1.55
CHCHD2P9-201ENST00000461726 FBLN2P98095 1184 aa24.74■■□□□ 1.55
CHCHD2P9-201ENST00000461726 SNAPC4Q5SXM2 1469 aa24.74■■□□□ 1.55
CHCHD2P9-201ENST00000461726 TOP2BQ02880 1626 aa24.74■■□□□ 1.55
CHCHD2P9-201ENST00000461726 BIVM-ERCC5R4GMW8 1640 aa24.74■■□□□ 1.55
CHCHD2P9-201ENST00000461726 GAPVD1Q14C86 1478 aa24.7■■□□□ 1.55
CHCHD2P9-201ENST00000461726 RIMBP3CA6NJZ7 1639 aa24.68■■□□□ 1.54
CHCHD2P9-201ENST00000461726 RIMBP3BA6NNM3 1639 aa24.68■■□□□ 1.54
CHCHD2P9-201ENST00000461726 RIMBP3Q9UFD9 1639 aa24.68■■□□□ 1.54
CHCHD2P9-201ENST00000461726 PBRM1Q86U86 1689 aa24.68■■□□□ 1.54
CHCHD2P9-201ENST00000461726 ABCA5Q8WWZ7 1642 aa24.68■■□□□ 1.54
CHCHD2P9-201ENST00000461726 CHMP7Q8WUX9 453 aaPredicted RBP24.66■■□□□ 1.54
CHCHD2P9-201ENST00000461726 SYNJ1O43426 1573 aa24.66■■□□□ 1.54
CHCHD2P9-201ENST00000461726 ARHGEF11O15085 1522 aa24.65■■□□□ 1.54
CHCHD2P9-201ENST00000461726 SYNJ2O15056 1496 aa24.64■■□□□ 1.54
CHCHD2P9-201ENST00000461726 CLASP1Q7Z460 1538 aa24.53■■□□□ 1.52
CHCHD2P9-201ENST00000461726 ERICH3Q5RHP9 1530 aa24.47■■□□□ 1.51
CHCHD2P9-201ENST00000461726 ADAMTS12P58397 1594 aa24.46■■□□□ 1.51
CHCHD2P9-201ENST00000461726 GRIN2AQ12879 1464 aa24.43■■□□□ 1.5
CHCHD2P9-201ENST00000461726 FHAD1B1AJZ9 1412 aa24.43■■□□□ 1.5
CHCHD2P9-201ENST00000461726 ARAP1Q96P48 1450 aa24.41■■□□□ 1.5
CHCHD2P9-201ENST00000461726 CYB5RLQ6IPT4 315 aa24.41■■□□□ 1.5
CHCHD2P9-201ENST00000461726 NUP160Q12769 1436 aa24.34■■□□□ 1.49
CHCHD2P9-201ENST00000461726 CEP170Q5SW79 1584 aa24.29■■□□□ 1.48
CHCHD2P9-201ENST00000461726 KIF27Q86VH2 1401 aa24.28■■□□□ 1.48
CHCHD2P9-201ENST00000461726 CUL7Q14999 1698 aa24.21■■□□□ 1.47
CHCHD2P9-201ENST00000461726 SHROOM2Q13796 1616 aa24.2■■□□□ 1.46
CHCHD2P9-201ENST00000461726 IGF1RP08069 1367 aa24.16■■□□□ 1.46
CHCHD2P9-201ENST00000461726 RUSC2Q8N2Y8 1516 aa24.1■■□□□ 1.45
CHCHD2P9-201ENST00000461726 ERCC6L2Q5T890 1561 aa24.09■■□□□ 1.45
CHCHD2P9-201ENST00000461726 JPH4Q96JJ6 628 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms