Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
COL25A1Q9BXS0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
COL25A1Q9BXS0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
COL25A1Q9BXS0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
COL25A1Q9BXS0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.11
COL25A1Q9BXS0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
COL25A1Q9BXS0 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
COL25A1Q9BXS0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
COL25A1Q9BXS0 TCAF2P1-201ENST00000291129 2421 ntBASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 MESTP4-201ENST00000412333 1204 ntBASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 SWI5-204ENST00000419867 1048 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 AC009238.3-201ENST00000512705 217 ntBASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 RNA5SP420-201ENST00000516997 137 ntBASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 VAMP1-204ENST00000535180 747 ntTSL 3 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 FAM187B2P-201ENST00000577135 713 ntBASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 RN7SL5P-201ENST00000581458 321 ntBASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 AC015802.4-203ENST00000592622 570 ntTSL 4 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 BNIP3P41-202ENST00000616656 861 ntBASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 CARS-216ENST00000639317 135 ntTSL 5 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 REXO1L4P-201ENST00000605109 1937 ntBASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.33□□□□□ -0.12
COL25A1Q9BXS0 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 CROCCP1-201ENST00000426910 5675 ntBASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 RPSAP61-201ENST00000412542 878 ntBASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 PHBP3-201ENST00000412562 819 ntBASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 CLK2P1-201ENST00000416636 1294 ntBASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 AL355075.5-201ENST00000553568 890 ntBASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 AC009061.2-204ENST00000602476 524 ntTSL 3 BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 AC136475.7-201ENST00000602949 592 ntBASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 RBP1-206ENST00000617459 667 ntTSL 2 BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 ME2P1-201ENST00000426028 1970 ntBASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms