RNA–Protein interactions for RNA: ENST00000458341.1

SP140L-205, Transcript of SP140 nuclear body protein like, humanhuman

TSL 1 (best) BASIC

Gene SP140L, Length 1,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140L-205ENST00000458341 NISCHQ9Y2I1 1504 aa31.38■■■□□ 2.61
SP140L-205ENST00000458341 CCDC180Q9P1Z9 1646 aa27.96■■■□□ 2.07
SP140L-205ENST00000458341 ABCC9O60706 1549 aa27.67■■■□□ 2.02
SP140L-205ENST00000458341 DCAF8L2P0C7V8 631 aa26.49■■□□□ 1.83
SP140L-205ENST00000458341 RB1CC1Q8TDY2 1594 aa26.46■■□□□ 1.83
SP140L-205ENST00000458341 NACADO15069 1562 aa26.36■■□□□ 1.81
SP140L-205ENST00000458341 ZCCHC6Q5VYS8 1495 aaKnown RBP26.09■■□□□ 1.77
SP140L-205ENST00000458341 MYO15BQ96JP2 1530 aa26.07■■□□□ 1.76
SP140L-205ENST00000458341 DCAF1Q9Y4B6 1507 aa25.9■■□□□ 1.74
SP140L-205ENST00000458341 PABPN1Q86U42 306 aaKnown RBP eCLIP25.85■■□□□ 1.73
SP140L-205ENST00000458341 UNC13AQ9UPW8 1703 aa25.83■■□□□ 1.73
SP140L-205ENST00000458341 BICRAQ9NZM4 1560 aa25.64■■□□□ 1.69
SP140L-205ENST00000458341 SCRIBQ14160 1630 aa25.59■■□□□ 1.69
SP140L-205ENST00000458341 DNAJC5BQ9UF47 199 aa25.56■■□□□ 1.68
SP140L-205ENST00000458341 SHROOM4Q9ULL8 1493 aa25.31■■□□□ 1.64
SP140L-205ENST00000458341 EIF4G1Q04637 1599 aaKnown RBP25.01■■□□□ 1.59
SP140L-205ENST00000458341 CC2D2AQ9P2K1 1620 aa24.97■■□□□ 1.59
SP140L-205ENST00000458341 CECR2Q9BXF3 1484 aa24.86■■□□□ 1.57
SP140L-205ENST00000458341 SMARCA4P51532 1647 aa24.4■■□□□ 1.5
SP140L-205ENST00000458341 BAZ1AQ9NRL2 1556 aaPredicted RBP24.35■■□□□ 1.49
SP140L-205ENST00000458341 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
SP140L-205ENST00000458341 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
SP140L-205ENST00000458341 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
SP140L-205ENST00000458341 MROH2BQ7Z745 1585 aa24.2■■□□□ 1.47
SP140L-205ENST00000458341 HMGXB3Q12766 1538 aa24.17■■□□□ 1.46
SP140L-205ENST00000458341 BAZ1BQ9UIG0 1483 aaKnown RBP24.15■■□□□ 1.46
SP140L-205ENST00000458341 PEG3Q9GZU2 1588 aa24.11■■□□□ 1.45
SP140L-205ENST00000458341 WIZO95785 1651 aa23.95■■□□□ 1.42
SP140L-205ENST00000458341 ERCC6Q03468 1493 aa23.89■■□□□ 1.41
SP140L-205ENST00000458341 RSF1Q96T23 1441 aaPredicted RBP23.89■■□□□ 1.41
SP140L-205ENST00000458341 NESP48681 1621 aa23.86■■□□□ 1.41
SP140L-205ENST00000458341 LAMC3Q9Y6N6 1575 aa23.72■■□□□ 1.39
SP140L-205ENST00000458341 SUPT5HO00267 1087 aaKnown RBP23.67■■□□□ 1.38
SP140L-205ENST00000458341 TOP2AP11388 1531 aaKnown RBP23.66■■□□□ 1.38
SP140L-205ENST00000458341 CADPSQ9ULU8 1353 aa23.63■■□□□ 1.37
SP140L-205ENST00000458341 CUX2O14529 1486 aa23.63■■□□□ 1.37
SP140L-205ENST00000458341 PDS5BQ9NTI5 1447 aa23.61■■□□□ 1.37
SP140L-205ENST00000458341 KIF21AQ7Z4S6 1674 aa23.55■■□□□ 1.36
SP140L-205ENST00000458341 THOC2Q8NI27 1593 aaKnown RBP23.5■■□□□ 1.35
SP140L-205ENST00000458341 CFTRP13569 1480 aa23.43■■□□□ 1.34
SP140L-205ENST00000458341 CCDC88BA6NC98 1476 aa23.4■■□□□ 1.34
SP140L-205ENST00000458341 FANCD2Q9BXW9 1451 aa23.38■■□□□ 1.33
SP140L-205ENST00000458341 CEP164Q9UPV0 1460 aa23.38■■□□□ 1.33
SP140L-205ENST00000458341 MRC2Q9UBG0 1479 aa23.37■■□□□ 1.33
SP140L-205ENST00000458341 WDR62O43379 1518 aa23.27■■□□□ 1.32
SP140L-205ENST00000458341 PRDM2Q13029 1718 aa23.21■■□□□ 1.31
SP140L-205ENST00000458341 DNAJC5Q9H3Z4 198 aa23.18■■□□□ 1.3
SP140L-205ENST00000458341 URB2Q14146 1524 aaKnown RBP23.14■■□□□ 1.3
SP140L-205ENST00000458341 TOPBP1Q92547 1522 aa22.97■■□□□ 1.27
SP140L-205ENST00000458341 ABCC8Q09428 1581 aa22.94■■□□□ 1.26
SP140L-205ENST00000458341 DNMBPQ6XZF7 1577 aa22.92■■□□□ 1.26
SP140L-205ENST00000458341 IFT140Q96RY7 1462 aa22.88■■□□□ 1.25
SP140L-205ENST00000458341 ZNF608Q9ULD9 1512 aaPredicted RBP22.81■■□□□ 1.24
SP140L-205ENST00000458341 POLA1P09884 1462 aaPredicted RBP22.76■■□□□ 1.23
SP140L-205ENST00000458341 CUX1P39880 1505 aa22.72■■□□□ 1.23
SP140L-205ENST00000458341 TARBP1Q13395 1621 aaKnown RBP22.7■■□□□ 1.23
SP140L-205ENST00000458341 EIF4G3O43432 1585 aaKnown RBP22.7■■□□□ 1.22
SP140L-205ENST00000458341 RAD54L2Q9Y4B4 1467 aa22.7■■□□□ 1.22
SP140L-205ENST00000458341 FGD5Q6ZNL6 1462 aa22.69■■□□□ 1.22
SP140L-205ENST00000458341 SOGA1O94964 1423 aa22.69■■□□□ 1.22
SP140L-205ENST00000458341 OSCARQ8IYS5 282 aa22.68■■□□□ 1.22
SP140L-205ENST00000458341 AQRO60306 1485 aaKnown RBP eCLIP22.67■■□□□ 1.22
SP140L-205ENST00000458341 TDRD9Q8NDG6 1382 aaKnown RBP22.61■■□□□ 1.21
SP140L-205ENST00000458341 FBLN2P98095 1184 aa22.54■■□□□ 1.2
SP140L-205ENST00000458341 WRNQ14191 1432 aaPredicted RBP eCLIP22.52■■□□□ 1.2
SP140L-205ENST00000458341 WDR97A6NE52 1622 aa22.48■■□□□ 1.19
SP140L-205ENST00000458341 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
SP140L-205ENST00000458341 CHD1O14646 1710 aa22.45■■□□□ 1.18
SP140L-205ENST00000458341 SNAPC4Q5SXM2 1469 aa22.45■■□□□ 1.18
SP140L-205ENST00000458341 TOP2BQ02880 1626 aa22.45■■□□□ 1.18
SP140L-205ENST00000458341 TRIM41Q8WV44 630 aa22.44■■□□□ 1.18
SP140L-205ENST00000458341 BIVM-ERCC5R4GMW8 1640 aa22.44■■□□□ 1.18
SP140L-205ENST00000458341 GRIN2BQ13224 1484 aa22.43■■□□□ 1.18
SP140L-205ENST00000458341 ABCA10Q8WWZ4 1543 aa22.43■■□□□ 1.18
SP140L-205ENST00000458341 GAPVD1Q14C86 1478 aa22.41■■□□□ 1.18
SP140L-205ENST00000458341 CHMP7Q8WUX9 453 aaPredicted RBP22.39■■□□□ 1.17
SP140L-205ENST00000458341 MAGI1Q96QZ7 1491 aaPredicted RBP22.38■■□□□ 1.17
SP140L-205ENST00000458341 PBRM1Q86U86 1689 aa22.36■■□□□ 1.17
SP140L-205ENST00000458341 ABCA5Q8WWZ7 1642 aa22.34■■□□□ 1.17
SP140L-205ENST00000458341 SYNJ2O15056 1496 aa22.31■■□□□ 1.16
SP140L-205ENST00000458341 RIMBP3CA6NJZ7 1639 aa22.3■■□□□ 1.16
SP140L-205ENST00000458341 RIMBP3BA6NNM3 1639 aa22.3■■□□□ 1.16
SP140L-205ENST00000458341 RIMBP3Q9UFD9 1639 aa22.3■■□□□ 1.16
SP140L-205ENST00000458341 ARHGEF11O15085 1522 aa22.28■■□□□ 1.16
SP140L-205ENST00000458341 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
SP140L-205ENST00000458341 CLASP1Q7Z460 1538 aa22.17■■□□□ 1.14
SP140L-205ENST00000458341 ADAMTS12P58397 1594 aa22.17■■□□□ 1.14
SP140L-205ENST00000458341 ERICH3Q5RHP9 1530 aa22.15■■□□□ 1.14
SP140L-205ENST00000458341 CYB5RLQ6IPT4 315 aa22.15■■□□□ 1.14
SP140L-205ENST00000458341 GRIN2AQ12879 1464 aa22.14■■□□□ 1.14
SP140L-205ENST00000458341 FHAD1B1AJZ9 1412 aa22.14■■□□□ 1.13
SP140L-205ENST00000458341 ARAP1Q96P48 1450 aa22.07■■□□□ 1.12
SP140L-205ENST00000458341 KIF27Q86VH2 1401 aa22.07■■□□□ 1.12
SP140L-205ENST00000458341 CEP170Q5SW79 1584 aa22.04■■□□□ 1.12
SP140L-205ENST00000458341 NUP160Q12769 1436 aa22.02■■□□□ 1.12
SP140L-205ENST00000458341 RUSC2Q8N2Y8 1516 aa22■■□□□ 1.11
SP140L-205ENST00000458341 IGF1RP08069 1367 aa21.98■■□□□ 1.11
SP140L-205ENST00000458341 CUL7Q14999 1698 aa21.92■■□□□ 1.1
SP140L-205ENST00000458341 FAM9AQ8IZU1 332 aaPredicted RBP21.9■■□□□ 1.1
SP140L-205ENST00000458341 ERCC6L2Q5T890 1561 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms