RNA–Protein interactions for RNA: ENST00000419867.6

SWI5-204, Transcript of SWI5 homologous recombination repair protein, humanhuman

TSL 1 (best) BASIC

Gene SWI5, Length 1,048 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5-204ENST00000419867 NISCHQ9Y2I1 1504 aa29.07■■■□□ 2.24
SWI5-204ENST00000419867 ABCC9O60706 1549 aa26.85■■□□□ 1.89
SWI5-204ENST00000419867 CCDC180Q9P1Z9 1646 aa26.41■■□□□ 1.82
SWI5-204ENST00000419867 DNAJC5BQ9UF47 199 aa25.64■■□□□ 1.7
SWI5-204ENST00000419867 RB1CC1Q8TDY2 1594 aa25.36■■□□□ 1.65
SWI5-204ENST00000419867 NACADO15069 1562 aa25.05■■□□□ 1.6
SWI5-204ENST00000419867 UNC13AQ9UPW8 1703 aa24.86■■□□□ 1.57
SWI5-204ENST00000419867 PABPN1Q86U42 306 aaKnown RBP eCLIP24.84■■□□□ 1.57
SWI5-204ENST00000419867 BICRAQ9NZM4 1560 aa24.67■■□□□ 1.54
SWI5-204ENST00000419867 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
SWI5-204ENST00000419867 MYO15BQ96JP2 1530 aa24.52■■□□□ 1.52
SWI5-204ENST00000419867 SHROOM4Q9ULL8 1493 aa24.29■■□□□ 1.48
SWI5-204ENST00000419867 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
SWI5-204ENST00000419867 CECR2Q9BXF3 1484 aa24.26■■□□□ 1.47
SWI5-204ENST00000419867 EIF4G1Q04637 1599 aaKnown RBP24.09■■□□□ 1.45
SWI5-204ENST00000419867 ZCCHC6Q5VYS8 1495 aaKnown RBP24■■□□□ 1.43
SWI5-204ENST00000419867 DCAF1Q9Y4B6 1507 aa24■■□□□ 1.43
SWI5-204ENST00000419867 SCRIBQ14160 1630 aa23.99■■□□□ 1.43
SWI5-204ENST00000419867 DNAJC5Q9H3Z4 198 aa23.95■■□□□ 1.42
SWI5-204ENST00000419867 CUX2O14529 1486 aa23.43■■□□□ 1.34
SWI5-204ENST00000419867 ERCC6Q03468 1493 aa23.23■■□□□ 1.31
SWI5-204ENST00000419867 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
SWI5-204ENST00000419867 ATAD2BQ9ULI0 1458 aa22.95■■□□□ 1.26
SWI5-204ENST00000419867 HMGXB3Q12766 1538 aa22.93■■□□□ 1.26
SWI5-204ENST00000419867 NESP48681 1621 aa22.93■■□□□ 1.26
SWI5-204ENST00000419867 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.25
SWI5-204ENST00000419867 SMARCA2P51531 1590 aa22.88■■□□□ 1.25
SWI5-204ENST00000419867 SMARCA4P51532 1647 aa22.83■■□□□ 1.25
SWI5-204ENST00000419867 LAMC3Q9Y6N6 1575 aa22.71■■□□□ 1.23
SWI5-204ENST00000419867 BAZ1BQ9UIG0 1483 aaKnown RBP22.7■■□□□ 1.22
SWI5-204ENST00000419867 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
SWI5-204ENST00000419867 TRIM41Q8WV44 630 aa22.65■■□□□ 1.22
SWI5-204ENST00000419867 PEG3Q9GZU2 1588 aa22.62■■□□□ 1.21
SWI5-204ENST00000419867 BAZ1AQ9NRL2 1556 aaPredicted RBP22.61■■□□□ 1.21
SWI5-204ENST00000419867 PDS5BQ9NTI5 1447 aa22.53■■□□□ 1.2
SWI5-204ENST00000419867 WDR62O43379 1518 aa22.41■■□□□ 1.18
SWI5-204ENST00000419867 MRC2Q9UBG0 1479 aa22.41■■□□□ 1.18
SWI5-204ENST00000419867 MROH2BQ7Z745 1585 aa22.39■■□□□ 1.18
SWI5-204ENST00000419867 CADPSQ9ULU8 1353 aa22.34■■□□□ 1.17
SWI5-204ENST00000419867 CEP164Q9UPV0 1460 aa22.22■■□□□ 1.15
SWI5-204ENST00000419867 OSCARQ8IYS5 282 aa22.14■■□□□ 1.13
SWI5-204ENST00000419867 WIZO95785 1651 aa22.12■■□□□ 1.13
SWI5-204ENST00000419867 FANCD2Q9BXW9 1451 aa22.12■■□□□ 1.13
SWI5-204ENST00000419867 RIMBP3CA6NJZ7 1639 aa22.06■■□□□ 1.12
SWI5-204ENST00000419867 RIMBP3BA6NNM3 1639 aa22.06■■□□□ 1.12
SWI5-204ENST00000419867 RIMBP3Q9UFD9 1639 aa22.06■■□□□ 1.12
SWI5-204ENST00000419867 CFTRP13569 1480 aa22■■□□□ 1.11
SWI5-204ENST00000419867 URB2Q14146 1524 aaKnown RBP22■■□□□ 1.11
SWI5-204ENST00000419867 ARHGEF11O15085 1522 aa21.9■■□□□ 1.1
SWI5-204ENST00000419867 PRDM2Q13029 1718 aa21.86■■□□□ 1.09
SWI5-204ENST00000419867 TOP2AP11388 1531 aaKnown RBP21.8■■□□□ 1.08
SWI5-204ENST00000419867 ZNF608Q9ULD9 1512 aaPredicted RBP21.8■■□□□ 1.08
SWI5-204ENST00000419867 IFT140Q96RY7 1462 aa21.78■■□□□ 1.08
SWI5-204ENST00000419867 EIF4G3O43432 1585 aaKnown RBP21.71■■□□□ 1.07
SWI5-204ENST00000419867 RSF1Q96T23 1441 aaPredicted RBP21.69■■□□□ 1.06
SWI5-204ENST00000419867 CHD1O14646 1710 aa21.67■■□□□ 1.06
SWI5-204ENST00000419867 CYB5RLQ6IPT4 315 aa21.66■■□□□ 1.06
SWI5-204ENST00000419867 TOPBP1Q92547 1522 aa21.65■■□□□ 1.06
SWI5-204ENST00000419867 ARAP1Q96P48 1450 aa21.65■■□□□ 1.06
SWI5-204ENST00000419867 TRHP20396 242 aaPredicted RBP21.59■■□□□ 1.05
SWI5-204ENST00000419867 DNMBPQ6XZF7 1577 aa21.55■■□□□ 1.04
SWI5-204ENST00000419867 ABCC8Q09428 1581 aa21.54■■□□□ 1.04
SWI5-204ENST00000419867 TARBP1Q13395 1621 aaKnown RBP21.54■■□□□ 1.04
SWI5-204ENST00000419867 CCDC88BA6NC98 1476 aa21.51■■□□□ 1.03
SWI5-204ENST00000419867 AQRO60306 1485 aaKnown RBP eCLIP21.5■■□□□ 1.033e-7■■■□□ 17
SWI5-204ENST00000419867 FBLN2P98095 1184 aa21.4■■□□□ 1.02
SWI5-204ENST00000419867 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.02
SWI5-204ENST00000419867 CLASP1Q7Z460 1538 aa21.39■■□□□ 1.01
SWI5-204ENST00000419867 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
SWI5-204ENST00000419867 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
SWI5-204ENST00000419867 SYNJ1O43426 1573 aa21.31■■□□□ 1
SWI5-204ENST00000419867 WDR97A6NE52 1622 aa21.3■■□□□ 1
SWI5-204ENST00000419867 RAD54L2Q9Y4B4 1467 aa21.3■■□□□ 1
SWI5-204ENST00000419867 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
SWI5-204ENST00000419867 SOGA1O94964 1423 aa21.23■□□□□ 0.99
SWI5-204ENST00000419867 MAGI1Q96QZ7 1491 aaPredicted RBP21.23■□□□□ 0.99
SWI5-204ENST00000419867 FGD5Q6ZNL6 1462 aa21.18■□□□□ 0.98
SWI5-204ENST00000419867 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
SWI5-204ENST00000419867 CHMP7Q8WUX9 453 aaPredicted RBP21.16■□□□□ 0.98
SWI5-204ENST00000419867 GRIN2BQ13224 1484 aa21.15■□□□□ 0.98
SWI5-204ENST00000419867 GAPVD1Q14C86 1478 aa21.14■□□□□ 0.98
SWI5-204ENST00000419867 PBRM1Q86U86 1689 aa21.12■□□□□ 0.97
SWI5-204ENST00000419867 CUX1P39880 1505 aa21.09■□□□□ 0.97
SWI5-204ENST00000419867 SUPT5HO00267 1087 aaKnown RBP21.01■□□□□ 0.95
SWI5-204ENST00000419867 ERCC6L2Q5T890 1561 aa20.99■□□□□ 0.95
SWI5-204ENST00000419867 ABCA5Q8WWZ7 1642 aa20.98■□□□□ 0.95
SWI5-204ENST00000419867 KIF13AQ9H1H9 1805 aa20.92■□□□□ 0.94
SWI5-204ENST00000419867 CEP170Q5SW79 1584 aa20.91■□□□□ 0.94
SWI5-204ENST00000419867 ABCA10Q8WWZ4 1543 aa20.91■□□□□ 0.94
SWI5-204ENST00000419867 GRIN2AQ12879 1464 aa20.89■□□□□ 0.94
SWI5-204ENST00000419867 SHROOM2Q13796 1616 aa20.87■□□□□ 0.93
SWI5-204ENST00000419867 ADAMTS12P58397 1594 aa20.86■□□□□ 0.93
SWI5-204ENST00000419867 NUP160Q12769 1436 aa20.85■□□□□ 0.93
SWI5-204ENST00000419867 FHAD1B1AJZ9 1412 aa20.7■□□□□ 0.9
SWI5-204ENST00000419867 WRNQ14191 1432 aaPredicted RBP eCLIP20.67■□□□□ 0.95e-6■■■■■ 29.2
SWI5-204ENST00000419867 ABCC10Q5T3U5 1492 aa20.67■□□□□ 0.9
SWI5-204ENST00000419867 DIP2BQ9P265 1576 aa20.65■□□□□ 0.9
SWI5-204ENST00000419867 PRG4Q92954 1404 aaPredicted RBP20.65■□□□□ 0.9
SWI5-204ENST00000419867 BIVM-ERCC5R4GMW8 1640 aa20.64■□□□□ 0.9
SWI5-204ENST00000419867 MAPKBP1O60336 1514 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms