Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP31Q70CQ4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP31Q70CQ4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP31Q70CQ4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP31Q70CQ4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC19.15■□□□□ 0.66
USP31Q70CQ4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP31Q70CQ4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP31Q70CQ4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP31Q70CQ4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
USP31Q70CQ4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC19.14■□□□□ 0.66
USP31Q70CQ4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
USP31Q70CQ4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
USP31Q70CQ4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
USP31Q70CQ4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
USP31Q70CQ4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC19.14■□□□□ 0.66
USP31Q70CQ4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP31Q70CQ4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP31Q70CQ4 FUCA1P1-201ENST00000374476 1351 ntBASIC19.14■□□□□ 0.65
USP31Q70CQ4 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC19.14■□□□□ 0.65
USP31Q70CQ4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP31Q70CQ4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP31Q70CQ4 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP31Q70CQ4 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC19.14■□□□□ 0.65
USP31Q70CQ4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP31Q70CQ4 PRSS3P1-201ENST00000503996 742 ntBASIC19.14■□□□□ 0.65
USP31Q70CQ4 PGAM1P12-201ENST00000505622 748 ntBASIC19.14■□□□□ 0.65
USP31Q70CQ4 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC19.14■□□□□ 0.65
USP31Q70CQ4 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC19.14■□□□□ 0.65
USP31Q70CQ4 MT2A-202ENST00000561491 581 ntTSL 2 BASIC19.14■□□□□ 0.65
USP31Q70CQ4 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC19.14■□□□□ 0.65
USP31Q70CQ4 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP31Q70CQ4 AL009176.1-201ENST00000607876 650 ntBASIC19.14■□□□□ 0.65
USP31Q70CQ4 TP53-221ENST00000615910 1149 ntTSL 5 BASIC19.14■□□□□ 0.65
USP31Q70CQ4 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP31Q70CQ4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP31Q70CQ4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP31Q70CQ4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
USP31Q70CQ4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
USP31Q70CQ4 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP31Q70CQ4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP31Q70CQ4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP31Q70CQ4 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 AC113367.3-201ENST00000508316 1912 ntBASIC19.13■□□□□ 0.65
USP31Q70CQ4 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP31Q70CQ4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP31Q70CQ4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP31Q70CQ4 NHP2-202ENST00000314397 599 ntTSL 2 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 NME4-203ENST00000397722 1232 ntTSL 2 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP31Q70CQ4 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP31Q70CQ4 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP31Q70CQ4 COX5A-205ENST00000568517 582 ntTSL 3 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 AC138466.4-201ENST00000623965 852 ntBASIC19.13■□□□□ 0.65
USP31Q70CQ4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP31Q70CQ4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
USP31Q70CQ4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP31Q70CQ4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP31Q70CQ4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP31Q70CQ4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP31Q70CQ4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP31Q70CQ4 FES-203ENST00000394302 2133 ntTSL 5 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP31Q70CQ4 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 FOXN3-AS2-201ENST00000554071 1262 ntBASIC19.12■□□□□ 0.65
USP31Q70CQ4 AL359091.4-201ENST00000610052 409 ntBASIC19.12■□□□□ 0.65
USP31Q70CQ4 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP31Q70CQ4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP31Q70CQ4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP31Q70CQ4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
USP31Q70CQ4 AL022313.4-201ENST00000562756 2046 ntBASIC19.11■□□□□ 0.65
USP31Q70CQ4 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC19.11■□□□□ 0.65
USP31Q70CQ4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms