RNA–Protein interactions for RNA: ENST00000506894.5

GPM6A-210, Transcript of glycoprotein M6A, humanhuman

TSL 1 (best) BASIC

Gene GPM6A, Length 2,614 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6A-210ENST00000506894 NISCHQ9Y2I1 1504 aa32.11■■■□□ 2.73
GPM6A-210ENST00000506894 SHROOM4Q9ULL8 1493 aa27.68■■■□□ 2.02
GPM6A-210ENST00000506894 CCDC180Q9P1Z9 1646 aa27.24■■□□□ 1.95
GPM6A-210ENST00000506894 ZCCHC6Q5VYS8 1495 aaKnown RBP27.14■■□□□ 1.93
GPM6A-210ENST00000506894 SUPT5HO00267 1087 aaKnown RBP27.02■■□□□ 1.92
GPM6A-210ENST00000506894 DCAF8L2P0C7V8 631 aa26.99■■□□□ 1.91
GPM6A-210ENST00000506894 DCAF1Q9Y4B6 1507 aa26.15■■□□□ 1.78
GPM6A-210ENST00000506894 MYO15BQ96JP2 1530 aa26.08■■□□□ 1.77
GPM6A-210ENST00000506894 CHIC1Q5VXU3 224 aa26.05■■□□□ 1.76
GPM6A-210ENST00000506894 HRCP23327 699 aa25.9■■□□□ 1.74
GPM6A-210ENST00000506894 SCRIBQ14160 1630 aa25.81■■□□□ 1.72
GPM6A-210ENST00000506894 ABCC9O60706 1549 aa25.64■■□□□ 1.7
GPM6A-210ENST00000506894 PCGF6Q9BYE7 350 aa25.55■■□□□ 1.68
GPM6A-210ENST00000506894 PPARGC1BQ86YN6 1023 aaKnown RBP25.5■■□□□ 1.67
GPM6A-210ENST00000506894 LOC105371045A0A1W2PR82 267 aa25.45■■□□□ 1.66
GPM6A-210ENST00000506894 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
GPM6A-210ENST00000506894 RB1CC1Q8TDY2 1594 aa25.27■■□□□ 1.64
GPM6A-210ENST00000506894 CECR2Q9BXF3 1484 aa25.23■■□□□ 1.63
GPM6A-210ENST00000506894 NACADO15069 1562 aa25.21■■□□□ 1.63
GPM6A-210ENST00000506894 MROH2BQ7Z745 1585 aa25.08■■□□□ 1.61
GPM6A-210ENST00000506894 FAM9AQ8IZU1 332 aaPredicted RBP25.04■■□□□ 1.6
GPM6A-210ENST00000506894 TRIM41Q8WV44 630 aa25.01■■□□□ 1.59
GPM6A-210ENST00000506894 EHMT2Q96KQ7 1210 aa25.01■■□□□ 1.59
GPM6A-210ENST00000506894 WIZO95785 1651 aa24.99■■□□□ 1.59
GPM6A-210ENST00000506894 UNC13AQ9UPW8 1703 aa24.7■■□□□ 1.54
GPM6A-210ENST00000506894 TRIM26Q12899 539 aaPredicted RBP24.67■■□□□ 1.54
GPM6A-210ENST00000506894 BAZ1AQ9NRL2 1556 aaPredicted RBP24.66■■□□□ 1.54
GPM6A-210ENST00000506894 PELP1Q8IZL8 1130 aaKnown RBP24.61■■□□□ 1.53
GPM6A-210ENST00000506894 PABPN1Q86U42 306 aaKnown RBP eCLIP24.58■■□□□ 1.52
GPM6A-210ENST00000506894 SMARCA4P51532 1647 aa24.52■■□□□ 1.52
GPM6A-210ENST00000506894 EIF4G1Q04637 1599 aaKnown RBP24.48■■□□□ 1.51
GPM6A-210ENST00000506894 SCAF1Q9H7N4 1312 aaKnown RBP24.47■■□□□ 1.51
GPM6A-210ENST00000506894 ABCC8Q09428 1581 aa24.45■■□□□ 1.51
GPM6A-210ENST00000506894 TOP2AP11388 1531 aaKnown RBP24.42■■□□□ 1.5
GPM6A-210ENST00000506894 CCDC88BA6NC98 1476 aa24.41■■□□□ 1.5
GPM6A-210ENST00000506894 SMARCA2P51531 1590 aa24.36■■□□□ 1.49
GPM6A-210ENST00000506894 ZEB1P37275 1124 aaPredicted RBP24.34■■□□□ 1.49
GPM6A-210ENST00000506894 BICRAQ9NZM4 1560 aa24.33■■□□□ 1.48
GPM6A-210ENST00000506894 SOGA1O94964 1423 aa24.15■■□□□ 1.46
GPM6A-210ENST00000506894 TTBK1Q5TCY1 1321 aaPredicted RBP24.15■■□□□ 1.46
GPM6A-210ENST00000506894 RUSC2Q8N2Y8 1516 aa24.1■■□□□ 1.45
GPM6A-210ENST00000506894 CEP162Q5TB80 1403 aa23.92■■□□□ 1.42
GPM6A-210ENST00000506894 PEG3Q9GZU2 1588 aa23.91■■□□□ 1.42
GPM6A-210ENST00000506894 ATAD2BQ9ULI0 1458 aa23.9■■□□□ 1.42
GPM6A-210ENST00000506894 UBTFP17480 764 aaKnown RBP23.89■■□□□ 1.41
GPM6A-210ENST00000506894 WRNQ14191 1432 aaPredicted RBP eCLIP23.88■■□□□ 1.41
GPM6A-210ENST00000506894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.88■■□□□ 1.41
GPM6A-210ENST00000506894 ACIN1Q9UKV3 1341 aaKnown RBP23.87■■□□□ 1.41
GPM6A-210ENST00000506894 CSRNP3Q8WYN3 585 aa23.87■■□□□ 1.41
GPM6A-210ENST00000506894 NEUROD1Q13562 356 aa23.87■■□□□ 1.41
GPM6A-210ENST00000506894 SYNJ1O43426 1573 aa23.86■■□□□ 1.41
GPM6A-210ENST00000506894 BAZ1BQ9UIG0 1483 aaKnown RBP23.85■■□□□ 1.41
GPM6A-210ENST00000506894 TNIKQ9UKE5 1360 aa23.76■■□□□ 1.39
GPM6A-210ENST00000506894 GTF3C3Q9Y5Q9 886 aa23.72■■□□□ 1.39
GPM6A-210ENST00000506894 RANGAP1P46060 587 aaPredicted RBP23.7■■□□□ 1.38
GPM6A-210ENST00000506894 EEA1Q15075 1411 aa23.69■■□□□ 1.38
GPM6A-210ENST00000506894 GOLGA3Q08378 1498 aa23.68■■□□□ 1.38
GPM6A-210ENST00000506894 CCER1Q8TC90 406 aaPredicted RBP23.68■■□□□ 1.38
GPM6A-210ENST00000506894 DIEXFQ68CQ4 756 aaKnown RBP23.59■■□□□ 1.37
GPM6A-210ENST00000506894 CENPBP07199 599 aaPredicted RBP23.57■■□□□ 1.36
GPM6A-210ENST00000506894 CEP164Q9UPV0 1460 aa23.54■■□□□ 1.36
GPM6A-210ENST00000506894 RAPGEF2Q9Y4G8 1499 aa23.54■■□□□ 1.36
GPM6A-210ENST00000506894 MYT1Q01538 1121 aa23.53■■□□□ 1.36
GPM6A-210ENST00000506894 KIF21BO75037 1637 aa23.49■■□□□ 1.35
GPM6A-210ENST00000506894 CLIP1P30622 1438 aa23.47■■□□□ 1.35
GPM6A-210ENST00000506894 TOP2BQ02880 1626 aa23.45■■□□□ 1.34
GPM6A-210ENST00000506894 HNRNPUL2Q1KMD3 747 aaKnown RBP23.38■■□□□ 1.33
GPM6A-210ENST00000506894 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
GPM6A-210ENST00000506894 BIVM-ERCC5R4GMW8 1640 aa23.35■■□□□ 1.33
GPM6A-210ENST00000506894 HMGXB3Q12766 1538 aa23.34■■□□□ 1.33
GPM6A-210ENST00000506894 CUX1P39880 1505 aa23.33■■□□□ 1.33
GPM6A-210ENST00000506894 VPS8Q8N3P4 1428 aa23.3■■□□□ 1.32
GPM6A-210ENST00000506894 YTHDC1Q96MU7 727 aaKnown RBP23.28■■□□□ 1.32
GPM6A-210ENST00000506894 APLP2Q06481 763 aa23.21■■□□□ 1.31
GPM6A-210ENST00000506894 CFTRP13569 1480 aa23.19■■□□□ 1.3
GPM6A-210ENST00000506894 PRXQ9BXM0 1461 aa23.18■■□□□ 1.3
GPM6A-210ENST00000506894 ZNF316A6NFI3 1004 aaPredicted RBP23.14■■□□□ 1.29
GPM6A-210ENST00000506894 ARAP1Q96P48 1450 aa23.13■■□□□ 1.29
GPM6A-210ENST00000506894 KIF27Q86VH2 1401 aa23.1■■□□□ 1.29
GPM6A-210ENST00000506894 ERICH3Q5RHP9 1530 aa23.09■■□□□ 1.29
GPM6A-210ENST00000506894 KANK4Q5T7N3 995 aaPredicted RBP23.09■■□□□ 1.29
GPM6A-210ENST00000506894 MIER1Q8N108 512 aa23.02■■□□□ 1.28
GPM6A-210ENST00000506894 CUX2O14529 1486 aa23.01■■□□□ 1.27
GPM6A-210ENST00000506894 CC2D2AQ9P2K1 1620 aa23■■□□□ 1.27
GPM6A-210ENST00000506894 PRDM2Q13029 1718 aa22.98■■□□□ 1.27
GPM6A-210ENST00000506894 CADPSQ9ULU8 1353 aa22.97■■□□□ 1.27
GPM6A-210ENST00000506894 ARHGAP35Q9NRY4 1499 aa22.94■■□□□ 1.26
GPM6A-210ENST00000506894 FGD5Q6ZNL6 1462 aa22.94■■□□□ 1.26
GPM6A-210ENST00000506894 IGF1RP08069 1367 aa22.91■■□□□ 1.26
GPM6A-210ENST00000506894 ITGAEP38570 1179 aa22.88■■□□□ 1.25
GPM6A-210ENST00000506894 NESP48681 1621 aa22.85■■□□□ 1.25
GPM6A-210ENST00000506894 P3H3Q8IVL6 736 aa22.83■■□□□ 1.25
GPM6A-210ENST00000506894 FANCD2Q9BXW9 1451 aa22.81■■□□□ 1.24
GPM6A-210ENST00000506894 CARMIL1Q5VZK9 1371 aa22.81■■□□□ 1.24
GPM6A-210ENST00000506894 RAD54L2Q9Y4B4 1467 aa22.8■■□□□ 1.24
GPM6A-210ENST00000506894 DHX57Q6P158 1386 aaKnown RBP22.75■■□□□ 1.23
GPM6A-210ENST00000506894 DNAJC5BQ9UF47 199 aa22.73■■□□□ 1.23
GPM6A-210ENST00000506894 ATP1B4Q9UN42 357 aaPredicted RBP22.73■■□□□ 1.23
GPM6A-210ENST00000506894 RRBP1Q9P2E9 1410 aaKnown RBP22.71■■□□□ 1.23
GPM6A-210ENST00000506894 CCNB3Q8WWL7 1395 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 266.7 ms