RNA–Protein interactions for RNA: ENST00000562339.5

LINC01225-202, Transcript of LINC01225 pseudogene, humanhuman

TSL 1 (best) BASIC

Gene LINC01225, Length 2,113 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01225-202ENST00000562339 NISCHQ9Y2I1 1504 aa32.43■■■□□ 2.78
LINC01225-202ENST00000562339 CCDC180Q9P1Z9 1646 aa28.08■■■□□ 2.09
LINC01225-202ENST00000562339 ZCCHC6Q5VYS8 1495 aaKnown RBP27.26■■□□□ 1.95
LINC01225-202ENST00000562339 DCAF8L2P0C7V8 631 aa26.9■■□□□ 1.9
LINC01225-202ENST00000562339 SHROOM4Q9ULL8 1493 aa26.89■■□□□ 1.9
LINC01225-202ENST00000562339 DCAF1Q9Y4B6 1507 aa26.8■■□□□ 1.88
LINC01225-202ENST00000562339 ABCC9O60706 1549 aa26.41■■□□□ 1.82
LINC01225-202ENST00000562339 MYO15BQ96JP2 1530 aa26.39■■□□□ 1.81
LINC01225-202ENST00000562339 SUPT5HO00267 1087 aaKnown RBP26.17■■□□□ 1.78
LINC01225-202ENST00000562339 NACADO15069 1562 aa26.17■■□□□ 1.78
LINC01225-202ENST00000562339 SCRIBQ14160 1630 aa25.9■■□□□ 1.74
LINC01225-202ENST00000562339 RB1CC1Q8TDY2 1594 aa25.88■■□□□ 1.73
LINC01225-202ENST00000562339 RSF1Q96T23 1441 aaPredicted RBP25.34■■□□□ 1.65
LINC01225-202ENST00000562339 CHIC1Q5VXU3 224 aa25.3■■□□□ 1.64
LINC01225-202ENST00000562339 UNC13AQ9UPW8 1703 aa25.23■■□□□ 1.63
LINC01225-202ENST00000562339 CECR2Q9BXF3 1484 aa25.16■■□□□ 1.62
LINC01225-202ENST00000562339 MROH2BQ7Z745 1585 aa25.04■■□□□ 1.6
LINC01225-202ENST00000562339 PABPN1Q86U42 306 aaKnown RBP eCLIP25.03■■□□□ 1.6
LINC01225-202ENST00000562339 BAZ1AQ9NRL2 1556 aaPredicted RBP25.03■■□□□ 1.6
LINC01225-202ENST00000562339 BICRAQ9NZM4 1560 aa25.01■■□□□ 1.59
LINC01225-202ENST00000562339 WIZO95785 1651 aa24.84■■□□□ 1.57
LINC01225-202ENST00000562339 SMARCA4P51532 1647 aa24.83■■□□□ 1.57
LINC01225-202ENST00000562339 TOP2AP11388 1531 aaKnown RBP24.61■■□□□ 1.53
LINC01225-202ENST00000562339 TRIM41Q8WV44 630 aa24.54■■□□□ 1.52
LINC01225-202ENST00000562339 PEG3Q9GZU2 1588 aa24.51■■□□□ 1.51
LINC01225-202ENST00000562339 LOC105371045A0A1W2PR82 267 aa24.41■■□□□ 1.5
LINC01225-202ENST00000562339 ATAD2BQ9ULI0 1458 aa24.41■■□□□ 1.5
LINC01225-202ENST00000562339 SMARCA2P51531 1590 aa24.41■■□□□ 1.5
LINC01225-202ENST00000562339 CCDC88BA6NC98 1476 aa24.4■■□□□ 1.5
LINC01225-202ENST00000562339 EIF4G1Q04637 1599 aaKnown RBP24.33■■□□□ 1.49
LINC01225-202ENST00000562339 BAZ1BQ9UIG0 1483 aaKnown RBP24.31■■□□□ 1.48
LINC01225-202ENST00000562339 NCAPD3P42695 1498 aa24.16■■□□□ 1.46
LINC01225-202ENST00000562339 FAM9AQ8IZU1 332 aaPredicted RBP24.15■■□□□ 1.46
LINC01225-202ENST00000562339 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
LINC01225-202ENST00000562339 ABCC8Q09428 1581 aa24.04■■□□□ 1.44
LINC01225-202ENST00000562339 PCGF6Q9BYE7 350 aa23.86■■□□□ 1.41
LINC01225-202ENST00000562339 CC2D2AQ9P2K1 1620 aa23.86■■□□□ 1.41
LINC01225-202ENST00000562339 EHMT2Q96KQ7 1210 aa23.83■■□□□ 1.4
LINC01225-202ENST00000562339 WRNQ14191 1432 aaPredicted RBP eCLIP23.83■■□□□ 1.4
LINC01225-202ENST00000562339 SOGA1O94964 1423 aa23.75■■□□□ 1.39
LINC01225-202ENST00000562339 EEA1Q15075 1411 aa23.73■■□□□ 1.39
LINC01225-202ENST00000562339 CFTRP13569 1480 aa23.7■■□□□ 1.38
LINC01225-202ENST00000562339 TRIM26Q12899 539 aaPredicted RBP23.68■■□□□ 1.38
LINC01225-202ENST00000562339 SYNJ1O43426 1573 aa23.67■■□□□ 1.38
LINC01225-202ENST00000562339 CSRNP3Q8WYN3 585 aa23.65■■□□□ 1.38
LINC01225-202ENST00000562339 RUSC2Q8N2Y8 1516 aa23.62■■□□□ 1.37
LINC01225-202ENST00000562339 CADPSQ9ULU8 1353 aa23.61■■□□□ 1.37
LINC01225-202ENST00000562339 HRCP23327 699 aa23.57■■□□□ 1.36
LINC01225-202ENST00000562339 TOP2BQ02880 1626 aa23.53■■□□□ 1.36
LINC01225-202ENST00000562339 TNIKQ9UKE5 1360 aa23.51■■□□□ 1.35
LINC01225-202ENST00000562339 PRDM2Q13029 1718 aa23.48■■□□□ 1.35
LINC01225-202ENST00000562339 BIVM-ERCC5R4GMW8 1640 aa23.46■■□□□ 1.35
LINC01225-202ENST00000562339 GOLGA3Q08378 1498 aa23.44■■□□□ 1.34
LINC01225-202ENST00000562339 CEP162Q5TB80 1403 aa23.42■■□□□ 1.34
LINC01225-202ENST00000562339 UBTFP17480 764 aaKnown RBP23.42■■□□□ 1.34
LINC01225-202ENST00000562339 CUX1P39880 1505 aa23.4■■□□□ 1.34
LINC01225-202ENST00000562339 CEP164Q9UPV0 1460 aa23.39■■□□□ 1.34
LINC01225-202ENST00000562339 KIF21BO75037 1637 aa23.35■■□□□ 1.33
LINC01225-202ENST00000562339 FANCD2Q9BXW9 1451 aa23.31■■□□□ 1.32
LINC01225-202ENST00000562339 LAMC3Q9Y6N6 1575 aa23.28■■□□□ 1.32
LINC01225-202ENST00000562339 NESP48681 1621 aa23.24■■□□□ 1.31
LINC01225-202ENST00000562339 PPARGC1BQ86YN6 1023 aaKnown RBP23.23■■□□□ 1.31
LINC01225-202ENST00000562339 KIF27Q86VH2 1401 aa23.22■■□□□ 1.31
LINC01225-202ENST00000562339 RAPGEF2Q9Y4G8 1499 aa23.21■■□□□ 1.31
LINC01225-202ENST00000562339 DNAJC5BQ9UF47 199 aa23.2■■□□□ 1.3
LINC01225-202ENST00000562339 PDS5BQ9NTI5 1447 aa23.18■■□□□ 1.3
LINC01225-202ENST00000562339 PRXQ9BXM0 1461 aa23.15■■□□□ 1.3
LINC01225-202ENST00000562339 FGD5Q6ZNL6 1462 aa23.13■■□□□ 1.29
LINC01225-202ENST00000562339 CLIP1P30622 1438 aa23.12■■□□□ 1.29
LINC01225-202ENST00000562339 DNMBPQ6XZF7 1577 aa23.12■■□□□ 1.29
LINC01225-202ENST00000562339 ERICH3Q5RHP9 1530 aa23.11■■□□□ 1.29
LINC01225-202ENST00000562339 CUX2O14529 1486 aa23.07■■□□□ 1.28
LINC01225-202ENST00000562339 TOPBP1Q92547 1522 aa23.07■■□□□ 1.28
LINC01225-202ENST00000562339 VPS8Q8N3P4 1428 aa22.98■■□□□ 1.27
LINC01225-202ENST00000562339 IGF1RP08069 1367 aa22.98■■□□□ 1.27
LINC01225-202ENST00000562339 ZEB1P37275 1124 aaPredicted RBP22.97■■□□□ 1.27
LINC01225-202ENST00000562339 POLA1P09884 1462 aaPredicted RBP22.97■■□□□ 1.27
LINC01225-202ENST00000562339 URB2Q14146 1524 aaKnown RBP22.96■■□□□ 1.27
LINC01225-202ENST00000562339 ABCA10Q8WWZ4 1543 aa22.93■■□□□ 1.26
LINC01225-202ENST00000562339 TTBK1Q5TCY1 1321 aaPredicted RBP22.93■■□□□ 1.26
LINC01225-202ENST00000562339 RANGAP1P46060 587 aaPredicted RBP22.93■■□□□ 1.26
LINC01225-202ENST00000562339 RAD54L2Q9Y4B4 1467 aa22.91■■□□□ 1.26
LINC01225-202ENST00000562339 KIF21AQ7Z4S6 1674 aa22.9■■□□□ 1.26
LINC01225-202ENST00000562339 CARMIL1Q5VZK9 1371 aa22.89■■□□□ 1.25
LINC01225-202ENST00000562339 APLP2Q06481 763 aa22.83■■□□□ 1.25
LINC01225-202ENST00000562339 ARAP1Q96P48 1450 aa22.79■■□□□ 1.24
LINC01225-202ENST00000562339 MRC2Q9UBG0 1479 aa22.79■■□□□ 1.24
LINC01225-202ENST00000562339 TDRD9Q8NDG6 1382 aaKnown RBP22.72■■□□□ 1.23
LINC01225-202ENST00000562339 WDR97A6NE52 1622 aa22.72■■□□□ 1.23
LINC01225-202ENST00000562339 ARHGAP35Q9NRY4 1499 aa22.72■■□□□ 1.23
LINC01225-202ENST00000562339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.71■■□□□ 1.23
LINC01225-202ENST00000562339 GAPVD1Q14C86 1478 aa22.7■■□□□ 1.22
LINC01225-202ENST00000562339 CUL7Q14999 1698 aa22.7■■□□□ 1.22
LINC01225-202ENST00000562339 ERCC6Q03468 1493 aa22.67■■□□□ 1.22
LINC01225-202ENST00000562339 CCER1Q8TC90 406 aaPredicted RBP22.67■■□□□ 1.22
LINC01225-202ENST00000562339 ABCA5Q8WWZ7 1642 aa22.65■■□□□ 1.22
LINC01225-202ENST00000562339 TARBP1Q13395 1621 aaKnown RBP22.65■■□□□ 1.22
LINC01225-202ENST00000562339 WDR62O43379 1518 aa22.61■■□□□ 1.21
LINC01225-202ENST00000562339 IFT140Q96RY7 1462 aa22.58■■□□□ 1.21
LINC01225-202ENST00000562339 KANK4Q5T7N3 995 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms