Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC233724.13-201ENST00000598383 410 ntBASIC15.57■□□□□ 0.08
TRIM11Q96F44 OR10B1P-201ENST00000601666 907 ntBASIC15.57■□□□□ 0.08
TRIM11Q96F44 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 AC002472.3-201ENST00000640124 621 ntBASIC15.57■□□□□ 0.08
TRIM11Q96F44 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 KRT8P24-201ENST00000560290 1559 ntBASIC15.57■□□□□ 0.08
TRIM11Q96F44 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 CICP4-201ENST00000447359 2812 ntBASIC15.57■□□□□ 0.08
TRIM11Q96F44 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 AC009093.2-202ENST00000620513 2079 ntBASIC15.56■□□□□ 0.08
TRIM11Q96F44 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 AL035414.1-201ENST00000451327 857 ntBASIC15.56■□□□□ 0.08
TRIM11Q96F44 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 USP32P1-208ENST00000506594 1164 ntBASIC15.56■□□□□ 0.08
TRIM11Q96F44 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 AC008825.2-201ENST00000603374 718 ntBASIC15.56■□□□□ 0.08
TRIM11Q96F44 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.56■□□□□ 0.08
TRIM11Q96F44 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM11Q96F44 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
TRIM11Q96F44 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM11Q96F44 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRIM11Q96F44 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms