RNA–Protein interactions for RNA: ENST00000442729.6

HACD3-202, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2 BASIC

Gene HACD3, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-202ENST00000442729 NISCHQ9Y2I1 1504 aa37.83■■■■□ 3.65
HACD3-202ENST00000442729 CCDC180Q9P1Z9 1646 aa33.88■■■■□ 3.01
HACD3-202ENST00000442729 ABCC9O60706 1549 aa33.59■■■□□ 2.97
HACD3-202ENST00000442729 RB1CC1Q8TDY2 1594 aa32.13■■■□□ 2.73
HACD3-202ENST00000442729 NACADO15069 1562 aa31.96■■■□□ 2.71
HACD3-202ENST00000442729 DCAF8L2P0C7V8 631 aa31.89■■■□□ 2.7
HACD3-202ENST00000442729 MYO15BQ96JP2 1530 aa31.59■■■□□ 2.65
HACD3-202ENST00000442729 ZCCHC6Q5VYS8 1495 aaKnown RBP31.42■■■□□ 2.62
HACD3-202ENST00000442729 UNC13AQ9UPW8 1703 aa31.32■■■□□ 2.6
HACD3-202ENST00000442729 PABPN1Q86U42 306 aaKnown RBP eCLIP31.29■■■□□ 2.6
HACD3-202ENST00000442729 DCAF1Q9Y4B6 1507 aa31.28■■■□□ 2.6
HACD3-202ENST00000442729 DNAJC5BQ9UF47 199 aa31.15■■■□□ 2.58
HACD3-202ENST00000442729 BICRAQ9NZM4 1560 aa31.08■■■□□ 2.57
HACD3-202ENST00000442729 SCRIBQ14160 1630 aa30.89■■■□□ 2.54
HACD3-202ENST00000442729 SHROOM4Q9ULL8 1493 aa30.81■■■□□ 2.52
HACD3-202ENST00000442729 EIF4G1Q04637 1599 aaKnown RBP30.36■■■□□ 2.45
HACD3-202ENST00000442729 CC2D2AQ9P2K1 1620 aa30.34■■■□□ 2.45
HACD3-202ENST00000442729 CECR2Q9BXF3 1484 aa30.24■■■□□ 2.43
HACD3-202ENST00000442729 SMARCA4P51532 1647 aa29.47■■■□□ 2.31
HACD3-202ENST00000442729 NCAPD3P42695 1498 aa29.46■■■□□ 2.31
HACD3-202ENST00000442729 ATAD2BQ9ULI0 1458 aa29.41■■■□□ 2.3
HACD3-202ENST00000442729 SMARCA2P51531 1590 aa29.41■■■□□ 2.3
HACD3-202ENST00000442729 BAZ1AQ9NRL2 1556 aaPredicted RBP29.4■■■□□ 2.3
HACD3-202ENST00000442729 HMGXB3Q12766 1538 aa29.3■■■□□ 2.28
HACD3-202ENST00000442729 BAZ1BQ9UIG0 1483 aaKnown RBP29.2■■■□□ 2.27
HACD3-202ENST00000442729 PEG3Q9GZU2 1588 aa29.16■■■□□ 2.26
HACD3-202ENST00000442729 MROH2BQ7Z745 1585 aa29.13■■■□□ 2.25
HACD3-202ENST00000442729 ERCC6Q03468 1493 aa29.06■■■□□ 2.24
HACD3-202ENST00000442729 NESP48681 1621 aa28.89■■■□□ 2.22
HACD3-202ENST00000442729 CUX2O14529 1486 aa28.87■■■□□ 2.21
HACD3-202ENST00000442729 WIZO95785 1651 aa28.82■■■□□ 2.2
HACD3-202ENST00000442729 LAMC3Q9Y6N6 1575 aa28.81■■■□□ 2.2
HACD3-202ENST00000442729 PDS5BQ9NTI5 1447 aa28.65■■■□□ 2.18
HACD3-202ENST00000442729 RSF1Q96T23 1441 aaPredicted RBP28.64■■■□□ 2.17
HACD3-202ENST00000442729 CADPSQ9ULU8 1353 aa28.61■■■□□ 2.17
HACD3-202ENST00000442729 KIF21AQ7Z4S6 1674 aa28.57■■■□□ 2.16
HACD3-202ENST00000442729 THOC2Q8NI27 1593 aaKnown RBP28.57■■■□□ 2.16
HACD3-202ENST00000442729 DNAJC5Q9H3Z4 198 aa28.54■■■□□ 2.16
HACD3-202ENST00000442729 TOP2AP11388 1531 aaKnown RBP28.5■■■□□ 2.15
HACD3-202ENST00000442729 MRC2Q9UBG0 1479 aa28.36■■■□□ 2.13
HACD3-202ENST00000442729 CEP164Q9UPV0 1460 aa28.32■■■□□ 2.12
HACD3-202ENST00000442729 CFTRP13569 1480 aa28.31■■■□□ 2.12
HACD3-202ENST00000442729 FANCD2Q9BXW9 1451 aa28.29■■■□□ 2.12
HACD3-202ENST00000442729 WDR62O43379 1518 aa28.26■■■□□ 2.11
HACD3-202ENST00000442729 CCDC88BA6NC98 1476 aa28.14■■■□□ 2.1
HACD3-202ENST00000442729 PRDM2Q13029 1718 aa28.09■■■□□ 2.09
HACD3-202ENST00000442729 URB2Q14146 1524 aaKnown RBP28■■■□□ 2.07
HACD3-202ENST00000442729 ABCC8Q09428 1581 aa27.78■■■□□ 2.04
HACD3-202ENST00000442729 TOPBP1Q92547 1522 aa27.77■■■□□ 2.04
HACD3-202ENST00000442729 IFT140Q96RY7 1462 aa27.74■■■□□ 2.03
HACD3-202ENST00000442729 DNMBPQ6XZF7 1577 aa27.72■■■□□ 2.03
HACD3-202ENST00000442729 SUPT5HO00267 1087 aaKnown RBP27.64■■■□□ 2.01
HACD3-202ENST00000442729 ZNF608Q9ULD9 1512 aaPredicted RBP27.6■■■□□ 2.01
HACD3-202ENST00000442729 OSCARQ8IYS5 282 aa27.6■■■□□ 2.01
HACD3-202ENST00000442729 EIF4G3O43432 1585 aaKnown RBP27.51■■□□□ 1.99
HACD3-202ENST00000442729 POLA1P09884 1462 aaPredicted RBP27.5■■□□□ 1.99
HACD3-202ENST00000442729 TARBP1Q13395 1621 aaKnown RBP27.47■■□□□ 1.99
HACD3-202ENST00000442729 TRIM41Q8WV44 630 aa27.42■■□□□ 1.98
HACD3-202ENST00000442729 AQRO60306 1485 aaKnown RBP eCLIP27.4■■□□□ 1.981e-6■■■■□ 23.2
HACD3-202ENST00000442729 SOGA1O94964 1423 aa27.4■■□□□ 1.98
HACD3-202ENST00000442729 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
HACD3-202ENST00000442729 FGD5Q6ZNL6 1462 aa27.37■■□□□ 1.97
HACD3-202ENST00000442729 CUX1P39880 1505 aa27.37■■□□□ 1.97
HACD3-202ENST00000442729 TDRD9Q8NDG6 1382 aaKnown RBP27.29■■□□□ 1.96
HACD3-202ENST00000442729 WDR97A6NE52 1622 aa27.29■■□□□ 1.96
HACD3-202ENST00000442729 CHD1O14646 1710 aa27.25■■□□□ 1.95
HACD3-202ENST00000442729 FBLN2P98095 1184 aa27.25■■□□□ 1.95
HACD3-202ENST00000442729 RIMBP3CA6NJZ7 1639 aa27.18■■□□□ 1.94
HACD3-202ENST00000442729 RIMBP3BA6NNM3 1639 aa27.18■■□□□ 1.94
HACD3-202ENST00000442729 RIMBP3Q9UFD9 1639 aa27.18■■□□□ 1.94
HACD3-202ENST00000442729 SNAPC4Q5SXM2 1469 aa27.17■■□□□ 1.94
HACD3-202ENST00000442729 GRIN2BQ13224 1484 aa27.15■■□□□ 1.94
HACD3-202ENST00000442729 ARHGEF11O15085 1522 aa27.14■■□□□ 1.93
HACD3-202ENST00000442729 MAGI1Q96QZ7 1491 aaPredicted RBP27.12■■□□□ 1.93
HACD3-202ENST00000442729 CHMP7Q8WUX9 453 aaPredicted RBP27.09■■□□□ 1.93
HACD3-202ENST00000442729 GAPVD1Q14C86 1478 aa27.08■■□□□ 1.93
HACD3-202ENST00000442729 ABCA10Q8WWZ4 1543 aa27.08■■□□□ 1.93
HACD3-202ENST00000442729 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
HACD3-202ENST00000442729 PBRM1Q86U86 1689 aa27.06■■□□□ 1.92
HACD3-202ENST00000442729 TOP2BQ02880 1626 aa27.03■■□□□ 1.92
HACD3-202ENST00000442729 BIVM-ERCC5R4GMW8 1640 aa27.03■■□□□ 1.92
HACD3-202ENST00000442729 SYNJ2O15056 1496 aa27.02■■□□□ 1.92
HACD3-202ENST00000442729 SYNJ1O43426 1573 aa27.01■■□□□ 1.91
HACD3-202ENST00000442729 ABCA5Q8WWZ7 1642 aa27■■□□□ 1.91
HACD3-202ENST00000442729 CLASP1Q7Z460 1538 aa26.93■■□□□ 1.9
HACD3-202ENST00000442729 CYB5RLQ6IPT4 315 aa26.92■■□□□ 1.9
HACD3-202ENST00000442729 ARAP1Q96P48 1450 aa26.87■■□□□ 1.89
HACD3-202ENST00000442729 ADAMTS12P58397 1594 aa26.8■■□□□ 1.88
HACD3-202ENST00000442729 GRIN2AQ12879 1464 aa26.78■■□□□ 1.88
HACD3-202ENST00000442729 ERICH3Q5RHP9 1530 aa26.77■■□□□ 1.88
HACD3-202ENST00000442729 FHAD1B1AJZ9 1412 aa26.75■■□□□ 1.87
HACD3-202ENST00000442729 NUP160Q12769 1436 aa26.66■■□□□ 1.86
HACD3-202ENST00000442729 CEP170Q5SW79 1584 aa26.64■■□□□ 1.86
HACD3-202ENST00000442729 TRHP20396 242 aaPredicted RBP26.61■■□□□ 1.85
HACD3-202ENST00000442729 KIF27Q86VH2 1401 aa26.56■■□□□ 1.84
HACD3-202ENST00000442729 SHROOM2Q13796 1616 aa26.51■■□□□ 1.83
HACD3-202ENST00000442729 ERCC6L2Q5T890 1561 aa26.49■■□□□ 1.83
HACD3-202ENST00000442729 CUL7Q14999 1698 aa26.46■■□□□ 1.83
HACD3-202ENST00000442729 IGF1RP08069 1367 aa26.44■■□□□ 1.82
HACD3-202ENST00000442729 RUSC2Q8N2Y8 1516 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms