Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
TRIM11Q96F44 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.67■■■■□ 3.3
TRIM11Q96F44 AL356512.1-201ENST00000607453 1739 ntBASIC35.07■■■■□ 3.2
TRIM11Q96F44 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.94■■■■□ 3.18
TRIM11Q96F44 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.91■■■■□ 3.18
TRIM11Q96F44 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.82■■■■□ 3.17
TRIM11Q96F44 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
TRIM11Q96F44 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.54■■■■□ 3.12
TRIM11Q96F44 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
TRIM11Q96F44 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.23■■■■□ 3.07
TRIM11Q96F44 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.08■■■■□ 3.05
TRIM11Q96F44 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.85■■■■□ 3.01
TRIM11Q96F44 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.76■■■□□ 2.99
TRIM11Q96F44 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
TRIM11Q96F44 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.45■■■□□ 2.95
TRIM11Q96F44 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.32■■■□□ 2.92
TRIM11Q96F44 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.31■■■□□ 2.92
TRIM11Q96F44 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC33.31■■■□□ 2.92
TRIM11Q96F44 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
TRIM11Q96F44 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
TRIM11Q96F44 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.03■■■□□ 2.88
TRIM11Q96F44 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.99■■■□□ 2.87
TRIM11Q96F44 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.96■■■□□ 2.87
TRIM11Q96F44 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.84■■■□□ 2.85
TRIM11Q96F44 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
TRIM11Q96F44 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.72■■■□□ 2.83
TRIM11Q96F44 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.71■■■□□ 2.83
TRIM11Q96F44 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.66■■■□□ 2.82
TRIM11Q96F44 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
TRIM11Q96F44 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
TRIM11Q96F44 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
TRIM11Q96F44 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.56■■■□□ 2.8
TRIM11Q96F44 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
TRIM11Q96F44 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
TRIM11Q96F44 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
TRIM11Q96F44 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
TRIM11Q96F44 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.39■■■□□ 2.78
TRIM11Q96F44 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.33■■■□□ 2.77
TRIM11Q96F44 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
TRIM11Q96F44 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.22■■■□□ 2.75
TRIM11Q96F44 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
TRIM11Q96F44 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.01■■■□□ 2.71
TRIM11Q96F44 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
TRIM11Q96F44 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.9■■■□□ 2.7
TRIM11Q96F44 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
TRIM11Q96F44 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
TRIM11Q96F44 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.68
TRIM11Q96F44 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.76■■■□□ 2.67
TRIM11Q96F44 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.75■■■□□ 2.67
TRIM11Q96F44 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
TRIM11Q96F44 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.68■■■□□ 2.66
TRIM11Q96F44 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TRIM11Q96F44 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM11Q96F44 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM11Q96F44 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
TRIM11Q96F44 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.47■■■□□ 2.63
TRIM11Q96F44 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TRIM11Q96F44 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
TRIM11Q96F44 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM11Q96F44 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TRIM11Q96F44 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TRIM11Q96F44 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TRIM11Q96F44 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TRIM11Q96F44 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.26■■■□□ 2.59
TRIM11Q96F44 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
TRIM11Q96F44 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TRIM11Q96F44 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.16■■■□□ 2.58
TRIM11Q96F44 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TRIM11Q96F44 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
TRIM11Q96F44 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
TRIM11Q96F44 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
TRIM11Q96F44 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
TRIM11Q96F44 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
TRIM11Q96F44 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
TRIM11Q96F44 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31■■■□□ 2.55
TRIM11Q96F44 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31■■■□□ 2.55
TRIM11Q96F44 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
TRIM11Q96F44 AC015813.7-201ENST00000623294 581 ntBASIC30.94■■■□□ 2.54
TRIM11Q96F44 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
TRIM11Q96F44 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
TRIM11Q96F44 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.87■■■□□ 2.53
TRIM11Q96F44 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
TRIM11Q96F44 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
TRIM11Q96F44 AC145285.7-201ENST00000614819 1539 ntBASIC30.85■■■□□ 2.53
TRIM11Q96F44 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.83■■■□□ 2.53
TRIM11Q96F44 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
TRIM11Q96F44 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM11Q96F44 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM11Q96F44 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TRIM11Q96F44 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
TRIM11Q96F44 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.59■■■□□ 2.49
TRIM11Q96F44 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.58■■■□□ 2.49
TRIM11Q96F44 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
TRIM11Q96F44 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TRIM11Q96F44 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TRIM11Q96F44 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TRIM11Q96F44 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TRIM11Q96F44 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
TRIM11Q96F44 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.44■■■□□ 2.46
TRIM11Q96F44 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 6.9 ms