Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGHV4-28A0A0C4DH34 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IGHV4-28A0A0C4DH34 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.45■□□□□ 0.22
IGHV4-28A0A0C4DH34 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.45■□□□□ 0.22
IGHV4-28A0A0C4DH34 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IGHV4-28A0A0C4DH34 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.45■□□□□ 0.22
IGHV4-28A0A0C4DH34 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGHV4-28A0A0C4DH34 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGHV4-28A0A0C4DH34 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IGHV4-28A0A0C4DH34 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGHV4-28A0A0C4DH34 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGHV4-28A0A0C4DH34 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
IGHV4-28A0A0C4DH34 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGHV4-28A0A0C4DH34 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGHV4-28A0A0C4DH34 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGHV4-28A0A0C4DH34 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.44■□□□□ 0.22
IGHV4-28A0A0C4DH34 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGHV4-28A0A0C4DH34 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGHV4-28A0A0C4DH34 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGHV4-28A0A0C4DH34 AL512631.2-201ENST00000604634 923 ntBASIC16.44■□□□□ 0.22
IGHV4-28A0A0C4DH34 MIR4466-201ENST00000606121 54 ntBASIC16.44■□□□□ 0.22
IGHV4-28A0A0C4DH34 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.44■□□□□ 0.22
IGHV4-28A0A0C4DH34 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGHV4-28A0A0C4DH34 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
IGHV4-28A0A0C4DH34 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGHV4-28A0A0C4DH34 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGHV4-28A0A0C4DH34 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGHV4-28A0A0C4DH34 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
IGHV4-28A0A0C4DH34 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.43■□□□□ 0.22
IGHV4-28A0A0C4DH34 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV4-28A0A0C4DH34 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV4-28A0A0C4DH34 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC16.43■□□□□ 0.22
IGHV4-28A0A0C4DH34 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV4-28A0A0C4DH34 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV4-28A0A0C4DH34 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV4-28A0A0C4DH34 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.43■□□□□ 0.22
IGHV4-28A0A0C4DH34 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.43■□□□□ 0.22
IGHV4-28A0A0C4DH34 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGHV4-28A0A0C4DH34 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
IGHV4-28A0A0C4DH34 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
IGHV4-28A0A0C4DH34 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
IGHV4-28A0A0C4DH34 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.42■□□□□ 0.22
IGHV4-28A0A0C4DH34 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC16.42■□□□□ 0.22
IGHV4-28A0A0C4DH34 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGHV4-28A0A0C4DH34 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGHV4-28A0A0C4DH34 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.42■□□□□ 0.22
IGHV4-28A0A0C4DH34 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGHV4-28A0A0C4DH34 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
IGHV4-28A0A0C4DH34 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGHV4-28A0A0C4DH34 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGHV4-28A0A0C4DH34 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
IGHV4-28A0A0C4DH34 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IGHV4-28A0A0C4DH34 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
IGHV4-28A0A0C4DH34 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGHV4-28A0A0C4DH34 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
IGHV4-28A0A0C4DH34 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGHV4-28A0A0C4DH34 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGHV4-28A0A0C4DH34 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
IGHV4-28A0A0C4DH34 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGHV4-28A0A0C4DH34 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGHV4-28A0A0C4DH34 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGHV4-28A0A0C4DH34 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
IGHV4-28A0A0C4DH34 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
IGHV4-28A0A0C4DH34 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGHV4-28A0A0C4DH34 ALDH1A3-203ENST00000557963 1670 ntBASIC16.4■□□□□ 0.22
IGHV4-28A0A0C4DH34 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGHV4-28A0A0C4DH34 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGHV4-28A0A0C4DH34 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IGHV4-28A0A0C4DH34 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IGHV4-28A0A0C4DH34 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.39■□□□□ 0.21
IGHV4-28A0A0C4DH34 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.39■□□□□ 0.21
IGHV4-28A0A0C4DH34 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IGHV4-28A0A0C4DH34 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.39■□□□□ 0.21
IGHV4-28A0A0C4DH34 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.39■□□□□ 0.21
IGHV4-28A0A0C4DH34 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
IGHV4-28A0A0C4DH34 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.39■□□□□ 0.21
IGHV4-28A0A0C4DH34 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
IGHV4-28A0A0C4DH34 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IGHV4-28A0A0C4DH34 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IGHV4-28A0A0C4DH34 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IGHV4-28A0A0C4DH34 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IGHV4-28A0A0C4DH34 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
IGHV4-28A0A0C4DH34 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
IGHV4-28A0A0C4DH34 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.38■□□□□ 0.21
IGHV4-28A0A0C4DH34 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.38■□□□□ 0.21
IGHV4-28A0A0C4DH34 SRD5A1P1-201ENST00000442297 786 ntBASIC16.38■□□□□ 0.21
IGHV4-28A0A0C4DH34 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.38■□□□□ 0.21
IGHV4-28A0A0C4DH34 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.38■□□□□ 0.21
IGHV4-28A0A0C4DH34 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IGHV4-28A0A0C4DH34 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
IGHV4-28A0A0C4DH34 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IGHV4-28A0A0C4DH34 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IGHV4-28A0A0C4DH34 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.37■□□□□ 0.21
IGHV4-28A0A0C4DH34 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
IGHV4-28A0A0C4DH34 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IGHV4-28A0A0C4DH34 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.37■□□□□ 0.21
IGHV4-28A0A0C4DH34 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.37■□□□□ 0.21
IGHV4-28A0A0C4DH34 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.37■□□□□ 0.21
IGHV4-28A0A0C4DH34 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IGHV4-28A0A0C4DH34 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms